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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:Midecamycin
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Accession:CHEBI:31845 term browser browse the term
Synonyms:related_synonym: Espinomycin A;   Formula=C41H67NO15;   InChI=1S/C41H67NO15/c1-11-30(45)54-29-21-32(47)51-24(4)16-14-13-15-17-28(44)23(3)20-27(18-19-43)37(38(29)50-10)57-40-35(48)34(42(8)9)36(25(5)53-40)56-33-22-41(7,49)39(26(6)52-33)55-31(46)12-2/h13-15,17,19,23-29,33-40,44,48-49H,11-12,16,18,20-22H2,1-10H3/b14-13+,17-15+/t23-,24-,25-,26+,27+,28+,29-,33+,34-,35-,36-,37+,38+,39+,40+,41-/m1/s1;   InChIKey=DMUAPQTXSSNEDD-QALJCMCCSA-N;   Medecamycin A1;   Medemycin A1;   Midecamycin A1;   Platenomycin B1;   SMILES=O([C@]1([C@H](O)[C@@H](N(C)C)[C@@H]([C@H](O1)C)O[C@]2(C[C@@](C)(O)[C@H]([C@@H](O2)C)OC(CC)=O)[H])[H])[C@@H]3[C@@H](OC)[C@](OC(CC)=O)(CC(=O)O[C@H](C)CC=CC=C[C@@H]([C@@H](C[C@@H]3CC=O)C)O)[H];   aboren;   medemycin;   rubimycin;   turimycin
 xref: CAS:35457-80-8;   Drug_Central:1861;   KEGG:D01339
 xref_mesh: MESH:C026483



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Midecamycin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb11 ATP binding cassette subfamily B member 11 decreases activity EXP
ISO
midecamycin results in decreased activity of ABCB11 protein CTD PMID:15618715 NCBI chr 3:54,016,854...54,112,797
Ensembl chr 3:54,017,127...54,112,730
JBrowse link
G Abcc2 ATP binding cassette subfamily C member 2 decreases activity EXP
ISO
midecamycin results in decreased activity of ABCC2 protein CTD PMID:15618715 NCBI chr 1:242,664,657...242,723,239
Ensembl chr 1:242,664,657...242,723,238
JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit increases expression ISO midecamycin results in increased expression of FOS mRNA; midecamycin results in increased expression of FOS protein CTD PMID:32454074 NCBI chr 6:105,121,170...105,124,036
Ensembl chr 6:105,121,170...105,124,036
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19800
    chemical entity 19800
      atom 19799
        nonmetal atom 19686
          carbon atom 19609
            organic molecular entity 19609
              Midecamycin 3
Path 2
Term Annotations click to browse term
  CHEBI ontology 19800
    subatomic particle 19799
      composite particle 19799
        hadron 19799
          baryon 19799
            nucleon 19799
              atomic nucleus 19799
                atom 19799
                  main group element atom 19698
                    p-block element atom 19698
                      carbon group element atom 19619
                        carbon atom 19609
                          organic molecular entity 19609
                            Midecamycin 3
paths to the root