Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:indigo carmine
go back to main search page
Accession:CHEBI:31695 term browser browse the term
Definition:An organic sodium salt resulting from the formal condensation of indigo carmine (acid form) with two equivalents of sodium hydroxide. It is an indicator at pH 11.5-14, changing from blue to yellow.
Synonyms:exact_synonym: disodium (2E)-3-oxo-2-(3-oxo-5-sulfonato-1,3-dihydro-2H-indol-2-ylidene)-2,3-dihydro-1H-indole-5-sulfonate
 related_synonym: Acid blue 74;   C.I. 73015;   C.I. 75781;   C.I. Acid Blue 74;   C.I. Food Blue 1;   C.I. Food Blue 1, disodium salt;   C.I. Natural Blue 2;   Disodium 3,3'-dioxo-(delta2,2'-biindoline)-5,5'-disulfonate;   Disodium 5,5'-disulfoindigo;   Disodium 5,5'-indigotin disulfonate;   Disodium indigo-5,5-disulfonate;   E 132;   FD and C Blue No. 2;   FD&C Blue No. 2;   Formula=C16H8N2Na2O8S2;   Formula=C16H8N2O8S2.2Na;   InChI=1S/C16H10N2O8S2.2Na/c19-15-9-5-7(27(21,22)23)1-3-11(9)17-13(15)14-16(20)10-6-8(28(24,25)26)2-4-12(10)18-14;;/h1-6,17-18H,(H,21,22,23)(H,24,25,26);;/q;2*+1/p-2/b14-13+;;;   InChIKey=KHLVKKOJDHCJMG-QDBORUFSSA-L;   Indigocarmine;   Indigotin-5,5'-disulfonic acid disodium salt;   Indigotindisulfonate sodium;   Natural blue 2;   SMILES=C=1(C=CC2=C(C1)C(\\C(=C\\3/NC=4C=CC(=CC4C3=O)S([O-])(=O)=O)\\N2)=O)S([O-])(=O)=O.[Na+].[Na+];   Sodium 5,5'-indigotindisulfonate;   Sodium indigo-5,5'-bisulfonate
 xref: CAS:860-22-0;   HMDB:HMDB0059912;   KEGG:D01563
 xref_mesh: MESH:D007203
 xref: PMID:24865501;   PMID:24922336;   PMID:25305623;   PMID:25361489;   PMID:25650249;   PMID:25849647;   PMID:25887729;   PMID:26058926;   PMID:26076807;   PMID:26216072;   PMID:26404013;   Reaxys:905434;   Wikipedia:Indigo_carmine


show annotations for term's descendants       view all columns           Sort by:
 
indigo carmine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AHR aryl hydrocarbon receptor JBrowse link 7 17,298,652 17,346,147 RGD:6480464
G CHRNA4 cholinergic receptor nicotinic alpha 4 subunit JBrowse link 20 63,343,223 63,375,471 RGD:6480464
G CHRNB2 cholinergic receptor nicotinic beta 2 subunit JBrowse link 1 154,567,778 154,584,708 RGD:6480464
G CYP1A1 cytochrome P450 family 1 subfamily A member 1 JBrowse link 15 74,719,542 74,725,528 RGD:6480464
G GRIN2A glutamate ionotropic receptor NMDA type subunit 2A JBrowse link 16 9,753,404 10,182,928 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 24141
    role 24034
      application 23445
        dye 1298
          histological dye 145
            indigo carmine 5
Path 2
Term Annotations click to browse term
  CHEBI ontology 24141
    subatomic particle 24095
      composite particle 24095
        hadron 24095
          baryon 24095
            nucleon 24095
              atomic nucleus 24095
                atom 24095
                  main group element atom 23924
                    p-block element atom 23924
                      chalcogen 23117
                        oxygen atom 22988
                          oxygen molecular entity 22988
                            oxide 12334
                              oxoanion 8859
                                chalcogen oxoanion 592
                                  sulfur oxoanion 591
                                    sulfonate 28
                                      organosulfonate oxoanion 28
                                        indigo carmine(2-) 5
                                          indigo carmine 5
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.