Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Pathways

CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:bixin
go back to main search page
Accession:CHEBI:3136 term browser browse the term
Definition:A carotenoic acid that is the 6'-monomethyl ester of 9'-cis-6,6'-diapocarotene-6,6'-dioic acid.
Synonyms:exact_synonym: (2E,4E,6E,8E,10E,12E,14E,16Z,18E)-20-methoxy-4,8,13,17-tetramethyl-20-oxoicosa-2,4,6,8,10,12,14,16,18-nonaenoic acid
 related_synonym: 6'-methyl hydrogen 9'-Z-6,6'-diapocarotene-6,6'-dioate;   6'-methyl hydrogen 9'-cis-6,6'-diapocarotene-6,6'-dioate;   Formula=C25H30O4;   InChI=1S/C25H30O4/c1-20(12-8-14-22(3)16-18-24(26)27)10-6-7-11-21(2)13-9-15-23(4)17-19-25(28)29-5/h6-19H,1-5H3,(H,26,27)/b7-6+,12-8+,13-9+,18-16+,19-17+,20-10+,21-11+,22-14+,23-15-;   InChIKey=RAFGELQLHMBRHD-SLEZCNMESA-N;   Methyl (9-cis)-hydrogen-6,6'-diapo-psi,psi-carotenedioate;   SMILES=C(\\C=C\\C(OC)=O)(=C/C=C/C(=C/C=C/C=C(/C=C/C=C(/C=C/C(=O)O)\\C)\\C)/C)/C
 xref: AGR:IND44366642;   AGR:IND605877940;   Beilstein:1729919;   CAS:6983-79-5;   KEGG:C08582;   KNApSAcK:C00003762
 xref_mesh: MESH:C004588
 xref: PMID:19891958;   PMID:20723662;   PMID:20924658;   PMID:21111424;   PMID:21381747;   PMID:21620794;   PMID:21777644;   PMID:21813796;   PMID:22019694;   PMID:22071422;   PMID:28784497;   PMID:29636694;   PMID:29982093;   PMID:30064749;   PMID:30204479;   PMID:30738990;   PMID:30909470;   PMID:30944740;   PMID:31126484;   PMID:31275744;   PMID:31546267;   PMID:31846197;   PMID:32028848;   Patent:WO2010149942;   Reaxys:1729919;   Wikipedia:Bixin



show annotations for term's descendants           Sort by:
bixin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nfe2l2 NFE2 like bZIP transcription factor 2 decreases ubiquitination ISO bixin results in decreased ubiquitination of NFE2L2 protein CTD PMID:30698894 NCBI chr 3:60,594,239...60,621,712
Ensembl chr 3:60,594,242...60,621,737
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19900
    role 19875
      chemical role 19497
        antioxidant 16054
          bixin 1
            bixin dialdehyde 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19900
    subatomic particle 19898
      composite particle 19898
        hadron 19898
          baryon 19898
            nucleon 19898
              atomic nucleus 19898
                atom 19898
                  main group element atom 19845
                    p-block element atom 19845
                      carbon group element atom 19792
                        carbon atom 19787
                          organic molecular entity 19787
                            organic group 18957
                              organic divalent group 18938
                                organodiyl group 18938
                                  carbonyl group 18890
                                    carbonyl compound 18890
                                      carboxylic acid 18611
                                        monocarboxylic acid 17936
                                          fatty acid 16596
                                            unsaturated fatty acid 1089
                                              polyunsaturated fatty acid 833
                                                carotenoic acid 56
                                                  bixin 1
                                                    bixin dialdehyde 0
paths to the root