Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term:trans-urocanic acid
go back to main search page
Accession:CHEBI:30817 term browser browse the term
Definition:A urocanic acid in which the double bond of the carboxyethene moiety has E configuration.
Synonyms:exact_synonym: (2E)-3-(1H-imidazol-4-yl)prop-2-enoic acid
 related_synonym: (2E)-3-(1H-imidazol-4-yl)acrylic acid;   (E)-3-(1H-imidazol-4-yl)-2-propenoic acid;   Formula=C6H6N2O2;   InChI=1S/C6H6N2O2/c9-6(10)2-1-5-3-7-4-8-5/h1-4H,(H,7,8)(H,9,10)/b2-1+;   InChIKey=LOIYMIARKYCTBW-OWOJBTEDSA-N;   SMILES=C(\\C=1N=CNC1)=C/C(=O)O;   Urocanic acid
 alt_id: CHEBI:46392;   CHEBI:9899
 xref: Beilstein:81403;   Beilstein:81405;   CAS:104-98-3;   CAS:3465-72-3;   DrugBank:DB01971;   HMDB:HMDB0034174;   KEGG:C00785
 xref_mesh: MESH:D014560
 xref: PDBeChem:URO;   PMID:9724745;   Patent:RU2445307;   Reaxys:81403;   Wikipedia:Urocanic_acid
 cyclic_relationship: is_conjugate_acid_of CHEBI:17771


show annotations for term's descendants           Sort by:
trans-urocanic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Flg filaggrin decreases abundance ISO FLG mutant form results in decreased abundance of Urocanic Acid CTD PMID:24061166 NCBI chr 2:178,884,793...178,912,986 JBrowse link
G Ifng interferon gamma multiple interactions ISO IFNG protein affects the susceptibility to [Permethrin co-treated with Urocanic Acid] CTD PMID:14617103 NCBI chr 7:53,903,339...53,907,375
Ensembl chr 7:53,903,337...53,907,375 		JBrowse link
G Tnf tumor necrosis factor affects response to substance ISO TNF protein affects the susceptibility to Urocanic Acid CTD PMID:14617103 NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19853
    role 19825
      chemical role 19455
        photochemical role 323
          chromophore 55
            urocanic acid 3
              trans-urocanic acid 3
Path 2
Term Annotations click to browse term
  CHEBI ontology 19853
    subatomic particle 19851
      composite particle 19851
        hadron 19851
          baryon 19851
            nucleon 19851
              atomic nucleus 19851
                atom 19851
                  main group element atom 19797
                    p-block element atom 19797
                      carbon group element atom 19738
                        carbon atom 19734
                          organic molecular entity 19734
                            organic molecule 19685
                              organic cyclic compound 19496
                                organic heterocyclic compound 18871
                                  heteroarene 17165
                                    monocyclic heteroarene 14990
                                      azole 14517
                                        diazole 10778
                                          imidazoles 10228
                                            urocanic acid 3
                                              trans-urocanic acid 3
paths to the root