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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term:ganglioside
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Accession:CHEBI:28892 term browser browse the term
Definition:A molecule composed of a glycosphingolipid (ceramide and oligosaccharide) with one or more sialic acids linked on the sugar chain.
Synonyms:exact_synonym: sialoglycosphingolipids
 related_synonym: gangliosides
 alt_id: CHEBI:26669;   CHEBI:36525;   CHEBI:5274
 xref: KEGG:C01808;   LIPID_MAPS_class:LMSP0601;   PMID:16158191;   PMID:2088646;   Wikipedia:Ganglioside


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ganglioside GM1 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GNAQ G protein subunit alpha q multiple interactions EXP G(M1) Ganglioside inhibits the reaction [mastoparan results in increased activity of and affects the localization of GNAQ protein] CTD PMID:21671308 NCBI chr 1:80,733,530...80,928,065
Ensembl chr 1:80,715,366...80,928,065 		JBrowse link
G HEXB hexosaminidase subunit beta multiple interactions EXP G(M1) Ganglioside inhibits the reaction [mastoparan results in increased secretion of HEXB protein]; G(M1) Ganglioside inhibits the reaction [Melitten results in increased secretion of HEXB protein]; G(M1) Ganglioside inhibits the reaction [Wasp Venoms results in increased secretion of HEXB protein] CTD PMID:21334356 PMID:21671308 NCBI chr 2:57,221,809...57,248,432
Ensembl chr 2:57,222,186...57,248,417 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 499
    chemical entity 499
      atom 499
        nonmetal atom 492
          carbon atom 480
            organic molecular entity 480
              lipid 111
                sphingolipid 2
                  ceramide 2
                    ganglioside 2
                      GM4(d18:1/16:0) 0
                      Ganglioside GD3 (d18:1/16:0) 0
                      Ganglioside GM1 (18:1/9Z-18:1) 0
                      Ganglioside GM3 (d18:1/20:0) 0
                      NeuAcalpha2-3Galbeta-Cer(d18:1/20:0) 0
                      alpha-Neu5Ac-(2->3)-beta-D-Gal-(1->4)-beta-D-GlcNAc-(1->3)-[alpha-D-GalNAc-(1->3)-[alpha-L-Fuc-(1->2)]-beta-D-Gal-(1->4)-[alpha-L-Fuc-(1->3)]-beta-D-GlcNAc-(1->3)-beta-D-Gal-(1->4)-beta-D-GlcNAc-(1->6)]-beta-D-Gal-(1->4)-beta-D-GlcNAc-(1->3)-beta-D-Gal-(1->4)-beta-D-Glc-(1<->1')-Cer 0
                      sialodecaosylceramide + 0
                      sialodiosylceramide + 0
                      sialoheptaosylceramide + 0
                      sialohexaosylceramide + 0
                      sialomonoglycosylceramide + 0
                      sialononaosylceramide + 0
                      sialooctaosylceramide + 0
                      sialopentaosylceramide + 0
                      sialotetraosylceramide + 2
                      sialotriaosylceramide + 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 499
    subatomic particle 499
      composite particle 499
        hadron 499
          baryon 499
            nucleon 499
              atomic nucleus 499
                atom 499
                  main group element atom 492
                    p-block element atom 492
                      carbon group element atom 481
                        carbon atom 480
                          organic molecular entity 480
                            heteroorganic entity 476
                              organochalcogen compound 430
                                organooxygen compound 428
                                  carbon oxoacid 368
                                    carboxylic acid 368
                                      carboacyl group 307
                                        univalent carboacyl group 307
                                          carbamoyl group 305
                                            carboxamide 305
                                              ceramide 2
                                                ganglioside 2
                                                  GM4(d18:1/16:0) 0
                                                  Ganglioside GD3 (d18:1/16:0) 0
                                                  Ganglioside GM1 (18:1/9Z-18:1) 0
                                                  Ganglioside GM3 (d18:1/20:0) 0
                                                  NeuAcalpha2-3Galbeta-Cer(d18:1/20:0) 0
                                                  alpha-Neu5Ac-(2->3)-beta-D-Gal-(1->4)-beta-D-GlcNAc-(1->3)-[alpha-D-GalNAc-(1->3)-[alpha-L-Fuc-(1->2)]-beta-D-Gal-(1->4)-[alpha-L-Fuc-(1->3)]-beta-D-GlcNAc-(1->3)-beta-D-Gal-(1->4)-beta-D-GlcNAc-(1->6)]-beta-D-Gal-(1->4)-beta-D-GlcNAc-(1->3)-beta-D-Gal-(1->4)-beta-D-Glc-(1<->1')-Cer 0
                                                  sialodecaosylceramide + 0
                                                  sialodiosylceramide + 0
                                                  sialoheptaosylceramide + 0
                                                  sialohexaosylceramide + 0
                                                  sialomonoglycosylceramide + 0
                                                  sialononaosylceramide + 0
                                                  sialooctaosylceramide + 0
                                                  sialopentaosylceramide + 0
                                                  sialotetraosylceramide + 2
                                                  sialotriaosylceramide + 0
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