Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:(R)-3-hydroxyoctanoyl-CoA
go back to main search page
Accession:CHEBI:28573 term browser browse the term
Definition:An (R)-3-hydroxyacyl-CoA that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of (R)-3-hydroxyoctanoic acid.
Synonyms:exact_synonym: 3'-phosphoadenosine 5'-{3-[(3R)-3-hydroxy-4-({3-[(2-{[(3R)-3-hydroxyoctanoyl]sulfanyl}ethyl)amino]-3-oxopropyl}amino)-2,2-dimethyl-4-oxobutyl] dihydrogen diphosphate}
 related_synonym: (R)-3-Hydroxycapryloyl-CoA;   (R)-3-hydroxycapryloyl-coenzyme A;   (R)-3-hydroxyoctanoyl-coenzyme A;   Formula=C29H50N7O18P3S;   InChI=1S/C29H50N7O18P3S/c1-4-5-6-7-17(37)12-20(39)58-11-10-31-19(38)8-9-32-27(42)24(41)29(2,3)14-51-57(48,49)54-56(46,47)50-13-18-23(53-55(43,44)45)22(40)28(52-18)36-16-35-21-25(30)33-15-34-26(21)36/h15-18,22-24,28,37,40-41H,4-14H2,1-3H3,(H,31,38)(H,32,42)(H,46,47)(H,48,49)(H2,30,33,34)(H2,43,44,45)/t17-,18-,22-,23-,24+,28-/m1/s1;   InChIKey=ATVGTMKWKDUCMS-JWBYWSJJSA-N;   SMILES=CCCCC[C@@H](O)CC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP(O)(=O)OP(O)(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP(O)(O)=O)n1cnc2c(N)ncnc12
 alt_id: CHEBI:18668;   CHEBI:324
 xref: KEGG:C05278;   PMID:10781572
 cyclic_relationship: is_conjugate_acid_of CHEBI:74279


show annotations for term's descendants           Sort by:
 

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19792
    role 19738
      biological role 19737
        antimicrobial agent 17329
          antibacterial agent 13029
            octanoic acid 2251
              octanoyl-CoA 0
                (R)-3-hydroxyoctanoyl-CoA 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19792
    subatomic particle 19788
      composite particle 19788
        hadron 19788
          baryon 19788
            nucleon 19788
              atomic nucleus 19788
                atom 19788
                  main group element atom 19675
                    p-block element atom 19675
                      chalcogen 19382
                        oxygen atom 19343
                          oxygen molecular entity 19343
                            hydroxides 19091
                              oxoacid 18211
                                pnictogen oxoacid 10155
                                  phosphorus oxoacid 9041
                                    phosphoric acids 7797
                                      phosphoric acid 7797
                                        phosphoric acid derivative 7474
                                          phosphate 7474
                                            organic phosphate 7473
                                              carbohydrate phosphate 1529
                                                phospho sugar 1455
                                                  aldose phosphate 1453
                                                    aldopentose phosphate 1447
                                                      ribose phosphate 1441
                                                        ribonucleotide 1402
                                                          purine ribonucleotide 1375
                                                            adenyl ribonucleotide 1244
                                                              adenosine phosphate 250
                                                                adenosine 5'-phosphate 249
                                                                  ADP 83
                                                                    coenzyme A 28
                                                                      acyl-CoA 28
                                                                        hydroxyacyl-CoA 0
                                                                          3-hydroxyacyl-CoA 0
                                                                            (R)-3-hydroxyacyl-CoA 0
                                                                              (R)-3-hydroxyoctanoyl-CoA 0
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.