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ONTOLOGY REPORT - ANNOTATIONS


Term:2-deoxy-D-ribofuranose 1-phosphate
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Accession:CHEBI:28542 term browser browse the term
Definition:A 2-deoxyribose 1-phosphate with D-ribofuranose as the sugar. An intermediate in the metabolism of pyrimidine.
Synonyms:exact_synonym: 2-deoxy-D-erythro-pentofuranose 1-(dihydrogen phosphate)
 related_synonym: 2-Deoxy-D-ribose 1-phosphate;   2-deoxy-1-O-phosphono-D-erythro-pentofuranose;   2-deoxy-1-O-phosphono-D-ribofuranose;   Formula=C5H11O7P;   InChI=1S/C5H11O7P/c6-2-4-3(7)1-5(11-4)12-13(8,9)10/h3-7H,1-2H2,(H2,8,9,10)/t3-,4+,5?/m0/s1;   InChIKey=KBDKAJNTYKVSEK-PYHARJCCSA-N;   SMILES=OC[C@H]1OC(C[C@@H]1O)OP(O)(O)=O
 alt_id: CHEBI:1081;   CHEBI:19558
 xref: Beilstein:1285902 "Beilstein";   CAS:17210-42-3 "ChemIDplus";   ECMDB:ECMDB01351;   HMDB:HMDB0001351;   KEGG:C00672
 xref_mesh: MESH:C031302
 xref: PMID:11103787 "Europe PMC";   Reaxys:1285902 "Reaxys";   YMDB:YMDB00663
 cyclic_relationship: is_conjugate_acid_of CHEBI:58576


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2-deoxy-D-ribofuranose 1-phosphate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G TYMP thymidine phosphorylase JBrowse link 22 50,525,752 50,530,085 RGD:6480464
2-deoxy-alpha-D-ribose 1-phosphate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G TYMP thymidine phosphorylase JBrowse link 22 50,525,752 50,530,085 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 23785
    role 23672
      biological role 23635
        biochemical role 22977
          metabolite 22871
            fundamental metabolite 9862
              2-deoxy-D-ribofuranose 1-phosphate 1
                2-deoxy-alpha-D-ribose 1-phosphate 1
                2-deoxy-beta-D-ribose 1-phosphate 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 23785
    subatomic particle 23736
      composite particle 23736
        hadron 23736
          baryon 23736
            nucleon 23736
              atomic nucleus 23736
                atom 23736
                  main group element atom 23555
                    p-block element atom 23555
                      chalcogen 22784
                        oxygen atom 22749
                          oxygen molecular entity 22749
                            hydroxides 21982
                              oxoacid 21176
                                pnictogen oxoacid 10359
                                  phosphorus oxoacid 9041
                                    phosphoric acids 7717
                                      phosphoric acid 7717
                                        phosphoric acid derivative 7355
                                          phosphate 7355
                                            organic phosphate 7354
                                              carbohydrate phosphate 1558
                                                phospho sugar 1488
                                                  aldose phosphate 1486
                                                    aldopentose phosphate 1480
                                                      deoxyaldopentose phosphate 9
                                                        2-deoxyribose phosphate 9
                                                          2-deoxyribose 1-phosphate 1
                                                            2-deoxy-D-ribofuranose 1-phosphate 1
                                                              2-deoxy-alpha-D-ribose 1-phosphate 1
                                                              2-deoxy-beta-D-ribose 1-phosphate 0
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.