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Term:5-methoxyindole-3-acetic acid
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Accession:CHEBI:28281 term browser browse the term
Definition:A member of the class of indole-3-acetic acids in which the hydrogen at position 5 of indole-3-acetic acid has been replaced by a methoxy group.
Synonyms:related_synonym: 2-(5-methoxy-1H-indol-3-yl)acetic acid;   2-(5-methoxy-1H-indol-3-yl)ethanoic acid;   2-(5-methoxyindole-3-yl)acetic acid;   5-Methoxyindol-3-ylacetic acid;   5-Methoxyindoleacetic acid;   Formula=C11H11NO3;   InChI=1S/C11H11NO3/c1-15-8-2-3-10-9(5-8)7(6-12-10)4-11(13)14/h2-3,5-6,12H,4H2,1H3,(H,13,14);   InChIKey=COCNDHOPIHDTHK-UHFFFAOYSA-N;   SMILES=O(C)C1=CC2=C(NC=C2CC(O)=O)C=C1
 alt_id: CHEBI:20600;   CHEBI:2088
 xref: CAS:3471-31-6 "ChemIDplus";   HMDB:HMDB0004096;   KEGG:C05660
 xref_mesh: MESH:D008735
 xref: MetaCyc:CPD-12020;   PMID:11459072 "Europe PMC";   PMID:11701394 "Europe PMC";   PMID:12106902 "Europe PMC";   PMID:15950974 "Europe PMC";   PMID:16141651 "Europe PMC";   PMID:16318213 "Europe PMC";   PMID:16512423 "Europe PMC";   PMID:19185928 "Europe PMC";   PMID:2423155 "Europe PMC";   PMID:2446428 "Europe PMC";   PMID:2476196 "Europe PMC";   PMID:2481026 "Europe PMC";   PMID:2580458 "Europe PMC";   PMID:26960374 "Europe PMC";   PMID:27723491 "Europe PMC";   PMID:29160833 "Europe PMC";   PMID:7537498 "Europe PMC";   PMID:8946731 "Europe PMC";   PMID:9345324 "Europe PMC";   Reaxys:187161 "Reaxys"

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5-methoxyindole-3-acetic acid term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cyp2d4 cytochrome P450, family 2, subfamily d, polypeptide 4 JBrowse link 7 123,599,264 123,608,436 RGD:6480464
G Htr7 5-hydroxytryptamine receptor 7 JBrowse link 1 254,547,964 254,671,811 RGD:6480464
G Ppp1r1b protein phosphatase 1, regulatory (inhibitor) subunit 1B JBrowse link 10 86,303,727 86,312,770 RGD:6480464
G Taar1 trace-amine-associated receptor 1 JBrowse link 1 22,595,477 22,596,475 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19617
    role 19560
      biological role 19553
        antimicrobial agent 17062
          antibacterial agent 12896
            5-methoxyindole-3-acetic acid 4
Path 2
Term Annotations click to browse term
  CHEBI ontology 19617
    subatomic particle 19613
      composite particle 19613
        hadron 19613
          baryon 19613
            nucleon 19613
              atomic nucleus 19613
                atom 19613
                  main group element atom 19491
                    p-block element atom 19491
                      carbon group element atom 19363
                        carbon atom 19355
                          organic molecular entity 19355
                            organic molecule 19272
                              organic cyclic compound 19062
                                organic heterocyclic compound 18129
                                  organic heteropolycyclic compound 17365
                                    organic heterobicyclic compound 15892
                                      benzopyrrole 5751
                                        indoles 5524
                                          indolyl carboxylic acid 3171
                                            indol-3-yl carboxylic acid 3170
                                              indole-3-acetic acids 3169
                                                5-methoxyindole-3-acetic acid 4
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.