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ONTOLOGY REPORT - ANNOTATIONS


Term:N-acetyl-beta-D-glucosamine
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Accession:CHEBI:28009 term browser browse the term
Definition:An N-acetyl-D-glucosamine having beta-configuration at the anomeric centre.
Synonyms:exact_synonym: 2-acetamido-2-deoxy-beta-D-glucopyranose;   2-acetamido-2-deoxyhexopyranose
 related_synonym: 2-Acetamido-2-deoxy-D-glucose;   2-Acetylamino-2-deoxy-D-glucose;   Acetylglucosamine;   Formula=C8H15NO6;   GlcNAc-beta;   InChI=1S/C8H15NO6/c1-3(11)9-5-7(13)6(12)4(2-10)15-8(5)14/h4-8,10,12-14H,2H2,1H3,(H,9,11)/t4-,5-,6-,7-,8-/m1/s1;   InChIKey=OVRNDRQMDRJTHS-FMDGEEDCSA-N;   N-Acetyl-D-glucosamine;   N-acetylglucosamine;   SMILES=CC(=O)N[C@H]1[C@H](O)O[C@H](CO)[C@@H](O)[C@@H]1O;   betaGlcNAc
 alt_id: CHEBI:21579;   CHEBI:44166;   CHEBI:7140;   CHEBI:7169
 xref: Beilstein:1247660;   CAS:7512-17-6;   Drug_Central:4615;   GlyTouCan:G49108TO;   Gmelin:721281;   KEGG:C03878
 xref_mesh: MESH:D000117
 xref: PDB:2FIK;   PDB:2Q86;   PDBeChem:NAG;   PMID:15692805;   PMID:16537470;   PMID:17991151;   PMID:18295796;   PMID:19443021;   PMID:25568069;   PMID:31537530;   PMID:7521740;   Reaxys:1247660


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N-acetyl-beta-D-glucosamine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ANGPTL4 angiopoietin like 4 JBrowse link 19 8,364,129 8,374,373 RGD:6480464
G AP1S3 adaptor related protein complex 1 subunit sigma 3 JBrowse link 2 223,755,326 223,837,582 RGD:6480464
G ARHGDIB Rho GDP dissociation inhibitor beta JBrowse link 12 14,942,015 14,961,601 RGD:6480464
G ARPC4 actin related protein 2/3 complex subunit 4 JBrowse link 3 9,792,495 9,807,724 RGD:6480464
G CALML5 calmodulin like 5 JBrowse link 10 5,498,697 5,499,570 RGD:6480464
G CAT catalase JBrowse link 11 34,438,934 34,472,060 RGD:6480464
G CCT5 chaperonin containing TCP1 subunit 5 JBrowse link 5 10,249,921 10,266,412 RGD:6480464
G CDKL1 cyclin dependent kinase like 1 JBrowse link 14 50,326,265 50,397,399 RGD:6480464
G CES1 carboxylesterase 1 JBrowse link 16 55,802,851 55,833,127 RGD:6480464
G DCT dopachrome tautomerase JBrowse link 13 94,436,811 94,549,406 RGD:6480464
G DIAPH2 diaphanous related formin 2 JBrowse link X 96,684,663 97,604,997 RGD:6480464
G ENO2 enolase 2 JBrowse link 12 6,914,580 6,923,697 RGD:6480464
G FBXO10 F-box protein 10 JBrowse link 9 37,510,892 37,576,380 RGD:6480464
G FBXO4 F-box protein 4 JBrowse link 5 41,918,061 42,040,230 RGD:6480464
G FCN1 ficolin 1 JBrowse link 9 134,903,232 134,917,912 RGD:6480464
G GPX1 glutathione peroxidase 1 JBrowse link 3 49,357,171 49,358,600 RGD:6480464
G GSTA4 glutathione S-transferase alpha 4 JBrowse link 6 52,977,952 52,995,332 RGD:6480464
G GSTT2 glutathione S-transferase theta 2 (gene/pseudogene) JBrowse link 22 23,980,134 23,983,915 RGD:6480464
G GSTT2B glutathione S-transferase theta 2B JBrowse link 22 23,957,414 23,961,206 RGD:6480464
G HK2 hexokinase 2 JBrowse link 2 74,834,126 74,893,359 RGD:6480464
G HK2P1 hexokinase 2 pseudogene 1 JBrowse link X 80,569,430 80,575,038 RGD:6480464
G ICAM1 intercellular adhesion molecule 1 JBrowse link 19 10,271,120 10,286,615 RGD:6480464
G IFNG interferon gamma JBrowse link 12 68,154,768 68,159,740 RGD:6480464
G IL4 interleukin 4 JBrowse link 5 132,673,986 132,682,678 RGD:6480464
G KLRB1 killer cell lectin like receptor B1 JBrowse link 12 9,594,551 9,607,916 RGD:6480464
G ODC1 ornithine decarboxylase 1 JBrowse link 2 10,439,968 10,448,327 RGD:6480464
G PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 JBrowse link 10 6,144,918 6,254,648 RGD:6480464
G PON2 paraoxonase 2 JBrowse link 7 95,404,862 95,435,072 RGD:6480464
G PPARA peroxisome proliferator activated receptor alpha JBrowse link 22 46,150,526 46,243,756 RGD:6480464
G PPP1R9A protein phosphatase 1 regulatory subunit 9A JBrowse link 7 94,907,202 95,296,415 RGD:6480464
G PRDX3 peroxiredoxin 3 JBrowse link 10 119,167,720 119,178,812 RGD:6480464
G PRDX5 peroxiredoxin 5 JBrowse link 11 64,318,121 64,321,811 RGD:6480464
G RBP1 retinol binding protein 1 JBrowse link 3 139,517,438 139,539,742 RGD:6480464
G SELE selectin E JBrowse link 1 169,722,640 169,734,079 RGD:6480464
G SELL selectin L JBrowse link 1 169,690,667 169,711,620 RGD:6480464
G SELP selectin P JBrowse link 1 169,588,849 169,630,125 RGD:6480464
G SERPINA3 serpin family A member 3 JBrowse link 14 94,612,391 94,624,053 RGD:6480464
G SERPINB4 serpin family B member 4 JBrowse link 18 63,637,259 63,644,310 RGD:6480464
G SLC2A3 solute carrier family 2 member 3 JBrowse link 12 7,919,230 7,936,187 RGD:6480464
G SLC7A5 solute carrier family 7 member 5 JBrowse link 16 87,830,022 87,869,507 RGD:6480464
G SNX5 sorting nexin 5 JBrowse link 20 17,941,600 17,968,794 RGD:6480464
G SOD2 superoxide dismutase 2 JBrowse link 6 159,669,069 159,762,281 RGD:6480464
G TGM5 transglutaminase 5 JBrowse link 15 43,232,590 43,266,928 RGD:6480464
G TNF tumor necrosis factor JBrowse link 6 31,575,565 31,578,336 RGD:6480464
G TTLL3 tubulin tyrosine ligase like 3 JBrowse link 3 9,809,915 9,836,365 RGD:6480464
G TUBB tubulin beta class I JBrowse link 6 30,720,352 30,725,422 RGD:6480464
G TUBBP1 tubulin beta pseudogene 1 JBrowse link 8 30,351,857 30,353,521 RGD:6480464
G TUBBP2 tubulin beta pseudogene 2 JBrowse link 13 41,383,682 41,385,076 RGD:6480464
G TUBGCP3 tubulin gamma complex associated protein 3 JBrowse link 13 112,485,005 112,606,469 RGD:6480464
G UBE2D3 ubiquitin conjugating enzyme E2 D3 JBrowse link 4 102,794,383 102,868,893 RGD:6480464
G UBE2D3P1 ubiquitin conjugating enzyme E2 D3 pseudogene 1 JBrowse link 20 5,291,788 5,292,953 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 23949
    role 23837
      biological role 23800
        epitope 7226
          N-acetyl-beta-D-glucosamine 51
            [6)-beta-D-GlcpNAc-(1->] residue + 0
            alpha-D-Galf-(1->3)-beta-D-GlcpNAc 0
            alpha-D-Galp-(1->3)-beta-D-GlcpNAc + 0
            alpha-D-Galp-(1->4)-beta-D-GlcpNAc 0
            alpha-D-Galp-(1->6)-beta-D-GlcpNAc 0
            alpha-D-Manp-(1->4)-beta-D-GlcpNAc 0
            beta-D-GalpNAc4S-(1->4)-beta-D-GlcpNAc 0
            beta-D-GclpNAc-(1->2)-[beta-D-GlcpNAc-(1->3)]-D-Manp 0
            beta-D-Glcp-(1->4)-beta-D-GlcpNAc 0
            beta-D-GlcpNAc-(1->2)-beta-D-Galp 0
            beta-D-GlcpNAc-(1->2)-beta-D-Manp 0
            beta-D-GlcpNAc-(1->3)-D-Gal-OH 0
            beta-D-GlcpNAc-(1->3)-D-Galp + 0
            beta-D-GlcpNAc-(1->3)-alpha-D-Glcp 0
            beta-D-GlcpNAc-(1->3)-beta-D-Galp-(1->4)-D-Glc-OH 0
            beta-D-GlcpNAc-(1->3)-beta-L-Fucp + 0
            beta-D-GlcpNAc-(1->4)-D-Manp + 0
            beta-D-GlcpNAc-(1->4)-beta-D-Galp + 0
            beta-D-GlcpNAc-(1->4)-beta-D-GlcpA 0
            beta-D-GlcpNAc-(1->6)-D-Galp + 0
            beta-D-GlcpNAc-(1->6)-alpha-D-GalpNAc3S 0
            beta-D-GlcpNAc-(1->6)-alpha-D-Manp + 0
            beta-D-GlcpNAc-(1->6)-beta-D-Galp + 0
            beta-L-Fucp-(1->6)-beta-D-GlcpNAc 0
            beta-L-Galp-(1->3)-beta-D-GlcpNAc 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 23949
    subatomic particle 23900
      composite particle 23900
        hadron 23900
          baryon 23900
            nucleon 23900
              atomic nucleus 23900
                atom 23900
                  main group element atom 23720
                    p-block element atom 23720
                      carbon group element atom 23436
                        carbon atom 23391
                          organic molecular entity 23391
                            heteroorganic entity 23017
                              organochalcogen compound 22501
                                organooxygen compound 22420
                                  carbohydrates and carbohydrate derivatives 12971
                                    carbohydrate 12971
                                      carbohydrate derivative 12597
                                        amino sugar 1181
                                          amino monosaccharide 1175
                                            hexosamine 1175
                                              N-acyl-hexosamine 939
                                                N-acetylhexosamine 51
                                                  N-acetyl-D-hexosamine 51
                                                    N-acetyl-D-glucosamine 51
                                                      N-acetyl-beta-D-glucosamine 51
                                                        [6)-beta-D-GlcpNAc-(1->] residue + 0
                                                        alpha-D-Galf-(1->3)-beta-D-GlcpNAc 0
                                                        alpha-D-Galp-(1->3)-beta-D-GlcpNAc + 0
                                                        alpha-D-Galp-(1->4)-beta-D-GlcpNAc 0
                                                        alpha-D-Galp-(1->6)-beta-D-GlcpNAc 0
                                                        alpha-D-Manp-(1->4)-beta-D-GlcpNAc 0
                                                        beta-D-GalpNAc4S-(1->4)-beta-D-GlcpNAc 0
                                                        beta-D-GclpNAc-(1->2)-[beta-D-GlcpNAc-(1->3)]-D-Manp 0
                                                        beta-D-Glcp-(1->4)-beta-D-GlcpNAc 0
                                                        beta-D-GlcpNAc-(1->2)-beta-D-Galp 0
                                                        beta-D-GlcpNAc-(1->2)-beta-D-Manp 0
                                                        beta-D-GlcpNAc-(1->3)-D-Gal-OH 0
                                                        beta-D-GlcpNAc-(1->3)-D-Galp + 0
                                                        beta-D-GlcpNAc-(1->3)-alpha-D-Glcp 0
                                                        beta-D-GlcpNAc-(1->3)-beta-D-Galp-(1->4)-D-Glc-OH 0
                                                        beta-D-GlcpNAc-(1->3)-beta-L-Fucp + 0
                                                        beta-D-GlcpNAc-(1->4)-D-Manp + 0
                                                        beta-D-GlcpNAc-(1->4)-beta-D-Galp + 0
                                                        beta-D-GlcpNAc-(1->4)-beta-D-GlcpA 0
                                                        beta-D-GlcpNAc-(1->6)-D-Galp + 0
                                                        beta-D-GlcpNAc-(1->6)-alpha-D-GalpNAc3S 0
                                                        beta-D-GlcpNAc-(1->6)-alpha-D-Manp + 0
                                                        beta-D-GlcpNAc-(1->6)-beta-D-Galp + 0
                                                        beta-L-Fucp-(1->6)-beta-D-GlcpNAc 0
                                                        beta-L-Galp-(1->3)-beta-D-GlcpNAc 0
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.