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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:streptamine
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Accession:CHEBI:27955 term browser browse the term
Definition:An amino cyclitol consisting of scyllo-inositol with the hydroxy groups at positions 1 and 3 replaced by unsubstituted amino groups.
Synonyms:exact_synonym: (1R,2r,3S,4R,5s,6S)-4,6-diaminocyclohexane-1,2,3,5-tetrol;   1,3-diamino-1,3-dideoxy-scyllo-inositol
 related_synonym: Formula=C6H14N2O4;   InChI=1S/C6H14N2O4/c7-1-3(9)2(8)5(11)6(12)4(1)10/h1-6,9-12H,7-8H2/t1-,2+,3-,4+,5-,6-;   InChIKey=ANLMVXSIPASBFL-FAEUDGQSSA-N;   SMILES=N[C@H]1[C@H](O)[C@@H](N)[C@H](O)[C@@H](O)[C@@H]1O
 alt_id: CHEBI:26779;   CHEBI:9277
 xref: Beilstein:26714;   CAS:488-52-8;   KEGG:C01854;   Reaxys:2802452


show annotations for term's descendants           Sort by:
 
isepamicin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pgd phosphogluconate dehydrogenase decreases activity EXP isepamicin results in decreased activity of PGD protein CTD PMID:15558954 NCBI chr 5:165,966,128...165,982,327 JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel increases expression ISO isepamicin results in increased expression of PKD2 protein mutant form CTD PMID:15001556 NCBI chr14:6,602,004...6,645,257
Ensembl chr14:6,602,004...6,645,257
JBrowse link
netilmycin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pgd phosphogluconate dehydrogenase decreases activity EXP Netilmicin results in decreased activity of PGD protein CTD PMID:15558954 NCBI chr 5:165,966,128...165,982,327 JBrowse link
paromomycin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase increases expression ISO Paromomycin results in increased expression of ATM protein mutant form CTD PMID:15498871 NCBI chr 8:58,015,938...58,119,973
Ensembl chr 8:58,015,940...58,120,045
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19786
    role 19732
      biological role 19732
        biochemical role 19333
          metabolite 19312
            eukaryotic metabolite 18980
              animal metabolite 18807
                mammalian metabolite 18806
                  human metabolite 18324
                    scyllo-inositol 8
                      streptamine 3
                        2-deoxystreptamine + 0
                        2-deoxystreptamine 4-phosphate 0
                        N(3')-acetyl-2-deoxystreptamine antibiotic 0
                        isepamicin + 2
                        micronomicin + 0
                        netilmycin + 1
                        paromomycin + 1
                        streptamine 4-phosphate 0
                        streptamine 5-phosphate 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19786
    subatomic particle 19784
      composite particle 19784
        hadron 19784
          baryon 19784
            nucleon 19784
              atomic nucleus 19784
                atom 19784
                  main group element atom 19675
                    p-block element atom 19675
                      chalcogen 19413
                        oxygen atom 19378
                          oxygen molecular entity 19378
                            hydroxides 19103
                              organic hydroxy compound 18667
                                polyol 8069
                                  cyclitol 2456
                                    inositol 41
                                      scyllo-inositol 8
                                        streptamine 3
                                          2-deoxystreptamine + 0
                                          2-deoxystreptamine 4-phosphate 0
                                          N(3')-acetyl-2-deoxystreptamine antibiotic 0
                                          isepamicin + 2
                                          micronomicin + 0
                                          netilmycin + 1
                                          paromomycin + 1
                                          streptamine 4-phosphate 0
                                          streptamine 5-phosphate 0
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