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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:alpha-L-rhamnopyranose
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Accession:CHEBI:27907 term browser browse the term
Definition:An L-rhamnopyranose having alpha-configuration at the anomeric centre.
Synonyms:exact_synonym: 6-deoxy-alpha-L-mannopyranose
 related_synonym: Formula=C6H12O5;   InChI=1S/C6H12O5/c1-2-3(7)4(8)5(9)6(10)11-2/h2-10H,1H3/t2-,3-,4+,5+,6+/m0/s1;   InChIKey=SHZGCJCMOBCMKK-HGVZOGFYSA-N;   SMILES=C[C@@H]1O[C@@H](O)[C@H](O)[C@H](O)[C@H]1O;   WURCS=2.0/1,1,0/[a2211m-1a_1-5]/1/;   alpha-6-Deoxy-L-mannose;   alpha-L-Mannomethylose;   alpha-L-Rha;   alpha-L-Rhap;   alpha-L-rhamnose
 alt_id: CHEBI:10293;   CHEBI:22425;   CHEBI:45196;   CHEBI:45460
 xref: GlyGen:G38999IM;   GlyTouCan:G38999IM;   KEGG:C02476;   KNApSAcK:C00001129;   PDBeChem:RAM;   PMID:19443021;   PMID:23795894;   PMID:23836132;   PMID:25568069;   PMID:27091615;   PMID:31537530;   PMID:7521740;   Reaxys:1680354


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icariside II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 decreases phosphorylation
multiple interactions
ISO baohuoside I results in decreased phosphorylation of AKT1 protein
baohuoside I inhibits the reaction [EGF protein results in increased phosphorylation of AKT1 protein]
CTD PMID:25119583 NCBI chr 6:131,713,716...131,735,319 JBrowse link
G Akt1s1 AKT1 substrate 1 multiple interactions
decreases phosphorylation
ISO baohuoside I inhibits the reaction [EGF protein results in increased phosphorylation of AKT1S1 protein]
baohuoside I results in decreased phosphorylation of AKT1S1 protein
CTD PMID:25119583 NCBI chr 1:95,333,186...95,339,678 JBrowse link
G Alpl alkaline phosphatase, biomineralization associated increases expression EXP baohuoside I results in increased expression of ALPL mRNA CTD PMID:17764702 NCBI chr 5:149,951,397...150,006,424 JBrowse link
G Bax BCL2 associated X, apoptosis regulator increases expression ISO baohuoside I results in increased expression of BAX protein CTD PMID:22687635 NCBI chr 1:95,940,001...95,945,407 JBrowse link
G Bcl2 BCL2, apoptosis regulator decreases expression ISO baohuoside I results in decreased expression of BCL2 protein CTD PMID:22687635 NCBI chr13:22,689,783...22,853,920 JBrowse link
G Bglap bone gamma-carboxyglutamate protein increases expression EXP baohuoside I results in increased expression of BGLAP mRNA CTD PMID:17764702 NCBI chr 2:173,838,518...173,839,495 JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase decreases phosphorylation
multiple interactions
ISO baohuoside I results in decreased phosphorylation of BRAF protein
baohuoside I inhibits the reaction [EGF protein results in increased phosphorylation of BRAF protein]
CTD PMID:25119583 NCBI chr 4:68,375,484...68,510,652 JBrowse link
G Casp3 caspase 3 increases cleavage
increases activity
ISO baohuoside I results in increased cleavage of CASP3 protein
baohuoside I results in increased activity of CASP3 protein
CTD PMID:19289254 PMID:22687635 NCBI chr16:45,662,910...45,681,171 JBrowse link
G Casp8 caspase 8 increases activity ISO baohuoside I results in increased activity of CASP8 protein CTD PMID:19289254 NCBI chr 9:60,263,863...60,312,542 JBrowse link
G Casp9 caspase 9 increases activity
increases cleavage
ISO baohuoside I results in increased activity of CASP9 protein
baohuoside I results in increased cleavage of CASP9 protein
CTD PMID:19289254 PMID:22687635 NCBI chr 5:154,108,872...154,126,628 JBrowse link
G Col1a2 collagen type I alpha 2 chain increases expression EXP baohuoside I results in increased expression of COL1A2 mRNA CTD PMID:17764702 NCBI chr 4:32,563,938...32,598,868 JBrowse link
G Egf epidermal growth factor multiple interactions ISO baohuoside I inhibits the reaction [EGF protein results in increased phosphorylation of AKT1 protein]; baohuoside I inhibits the reaction [EGF protein results in increased phosphorylation of AKT1S1 protein]; baohuoside I inhibits the reaction [EGF protein results in increased phosphorylation of BRAF protein]; baohuoside I inhibits the reaction [EGF protein results in increased phosphorylation of EGFR protein]; baohuoside I inhibits the reaction [EGF protein results in increased phosphorylation of MAPK1 protein]; baohuoside I inhibits the reaction [EGF protein results in increased phosphorylation of MAPK3 protein]; baohuoside I inhibits the reaction [EGF protein results in increased phosphorylation of MTOR protein] CTD PMID:25119583 NCBI chr 2:218,219,408...218,302,370 JBrowse link
G Egfr epidermal growth factor receptor multiple interactions
decreases phosphorylation
ISO baohuoside I inhibits the reaction [EGF protein results in increased phosphorylation of EGFR protein]
baohuoside I results in decreased phosphorylation of EGFR protein
CTD PMID:25119583 NCBI chr14:91,176,931...91,349,722 JBrowse link
G Gsk3b glycogen synthase kinase 3 beta decreases phosphorylation ISO baohuoside I results in decreased phosphorylation of GSK3B protein CTD PMID:25119583 NCBI chr11:62,498,997...62,648,665 JBrowse link
G Mapk1 mitogen activated protein kinase 1 multiple interactions
decreases phosphorylation
ISO baohuoside I inhibits the reaction [EGF protein results in increased phosphorylation of MAPK1 protein]
baohuoside I results in decreased phosphorylation of MAPK1 protein
CTD PMID:25119583 NCBI chr11:83,957,813...84,023,629 JBrowse link
G Mapk3 mitogen activated protein kinase 3 multiple interactions
decreases phosphorylation
ISO baohuoside I inhibits the reaction [EGF protein results in increased phosphorylation of MAPK3 protein]
baohuoside I results in decreased phosphorylation of MAPK3 protein
CTD PMID:25119583 NCBI chr 1:181,366,646...181,372,863 JBrowse link
G Mki67 marker of proliferation Ki-67 decreases expression ISO baohuoside I results in decreased expression of MKI67 protein CTD PMID:25119583 NCBI chr 1:190,496,319...190,522,983 JBrowse link
G Mtor mechanistic target of rapamycin kinase multiple interactions
decreases phosphorylation
ISO baohuoside I inhibits the reaction [EGF protein results in increased phosphorylation of MTOR protein]
baohuoside I results in decreased phosphorylation of MTOR protein
CTD PMID:25119583 NCBI chr 5:158,884,856...158,994,311 JBrowse link
G Nos2 nitric oxide synthase 2 decreases expression ISO baohuoside I results in decreased expression of NOS2 CTD PMID:19289254 NCBI chr10:63,815,308...63,851,208 JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 increases cleavage
multiple interactions
ISO baohuoside I results in increased cleavage of PARP1 protein
Dinoprostone inhibits the reaction [baohuoside I results in increased cleavage of PARP1 protein]; PTGS2 mutant form promotes the reaction [baohuoside I results in increased cleavage of PARP1 protein]
CTD PMID:19289254 PMID:22687635 NCBI chr13:92,307,593...92,339,406 JBrowse link
G Pdpk1 3-phosphoinositide dependent protein kinase-1 decreases phosphorylation ISO baohuoside I results in decreased phosphorylation of PDPK1 protein CTD PMID:25119583 NCBI chr10:13,105,435...13,182,664 JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 decreases expression
multiple interactions
ISO baohuoside I results in decreased expression of PTGS2
[baohuoside I results in decreased expression of PTGS2] which results in decreased abundance of Dinoprostone; PTGS2 mutant form promotes the reaction [baohuoside I results in increased cleavage of PARP1 protein]
CTD PMID:19289254 NCBI chr13:62,164,080...62,169,770 JBrowse link
G Tnfrsf11b TNF receptor superfamily member 11B increases expression EXP baohuoside I results in increased expression of TNFRSF11B mRNA CTD PMID:17764702 NCBI chr 7:85,566,520...85,594,526 JBrowse link
G Tnfsf11 TNF superfamily member 11 decreases expression EXP baohuoside I results in decreased expression of TNFSF11 mRNA CTD PMID:17764702 NCBI chr15:53,674,990...53,705,171 JBrowse link
G Vegfa vascular endothelial growth factor A decreases expression ISO baohuoside I results in decreased expression of VEGFA CTD PMID:19289254 NCBI chr 9:14,955,300...14,970,641 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19762
    role 19708
      biological role 19708
        epitope 6979
          alpha-L-rhamnopyranose 25
            2''-acetylpetiolaroside 0
            2-O-acetyl-alpha-L-rhamnose 0
            2-O-methyl-alpha-L-rhamnose + 0
            2-O-sulfo-3,4-di-O-methyl-alpha-L-rhamnose 0
            3'-O-methyltricetin 3-O-alpha-L-rhamnopyranoside 0
            3,4-di-O-methyl-alpha-L-rhamnose 0
            3-O-methyl-alpha-L-rhamnose 0
            4-O-methyl-alpha-L-rhamnopyranose 0
            8-hydrazinocarbonyloctyl 2-O-methyl-alpha-L-rhamnoside + 0
            alpha-L-rhamnosyl group 0
            fruticoside E 0
            icariside II 25
            petiolaroside + 0
            petiolaroside decaacetate 0
            quercetin 7-O-alpha-L-rhamnopyranoside 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19762
    subatomic particle 19760
      composite particle 19760
        hadron 19760
          baryon 19760
            nucleon 19760
              atomic nucleus 19760
                atom 19760
                  main group element atom 19651
                    p-block element atom 19651
                      carbon group element atom 19570
                        carbon atom 19560
                          organic molecular entity 19560
                            heteroorganic entity 19203
                              organochalcogen compound 18961
                                organooxygen compound 18894
                                  carbohydrates and carbohydrate derivatives 12330
                                    carbohydrate 12330
                                      monosaccharide 4289
                                        aldose 2665
                                          aldohexose 2305
                                            deoxyhexose 128
                                              deoxymannose 26
                                                rhamnose 26
                                                  L-rhamnose 25
                                                    L-rhamnopyranose 25
                                                      alpha-L-rhamnopyranose 25
                                                        2''-acetylpetiolaroside 0
                                                        2-O-acetyl-alpha-L-rhamnose 0
                                                        2-O-methyl-alpha-L-rhamnose + 0
                                                        2-O-sulfo-3,4-di-O-methyl-alpha-L-rhamnose 0
                                                        3'-O-methyltricetin 3-O-alpha-L-rhamnopyranoside 0
                                                        3,4-di-O-methyl-alpha-L-rhamnose 0
                                                        3-O-methyl-alpha-L-rhamnose 0
                                                        4-O-methyl-alpha-L-rhamnopyranose 0
                                                        8-hydrazinocarbonyloctyl 2-O-methyl-alpha-L-rhamnoside + 0
                                                        alpha-L-rhamnosyl group 0
                                                        fruticoside E 0
                                                        icariside II 25
                                                        petiolaroside + 0
                                                        petiolaroside decaacetate 0
                                                        quercetin 7-O-alpha-L-rhamnopyranoside 0
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