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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:D-erythrose
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Accession:CHEBI:27904 term browser browse the term
Definition:The D-enantiomer of erythrose.
Synonyms:exact_synonym: (2R,3R)-2,3,4-trihydroxybutanal;   D-erythro-tetrose
 related_synonym: Formula=C4H8O4;   InChI=1S/C4H8O4/c5-1-3(7)4(8)2-6/h1,3-4,6-8H,2H2/t3-,4+/m0/s1;   InChIKey=YTBSYETUWUMLBZ-IUYQGCFVSA-N;   SMILES=OC[C@@H](O)[C@@H](O)C=O
 alt_id: CHEBI:20926;   CHEBI:4113
 xref: Beilstein:5805561;   CAS:583-50-6;   HMDB:HMDB0002649;   KEGG:C01796;   KNApSAcK:C00007412;   PMID:16901854;   PMID:22841585;   PMID:23501397;   PMID:6229527;   PMID:6238947;   Reaxys:5805561;   Wikipedia:Erythrose
 cyclic_relationship: is_enantiomer_of CHEBI:21288



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D-erythrose 4-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Idh2 isocitrate dehydrogenase (NADP(+)) 2 multiple interactions
increases abundance
ISO Triazines inhibits the reaction [IDH2 protein mutant form results in increased abundance of erythrose 4-phosphate] CTD PMID:27469509 NCBI chr 1:134,038,644...134,057,969
Ensembl chr 1:134,029,772...134,058,025
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Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 20056
    role 20008
      biological role 20007
        biochemical role 19640
          metabolite 19623
            eukaryotic metabolite 19326
              plant metabolite 17657
                D-erythrose 1
                  4-deoxy-4-sulfo-D-erythrose(1-) 0
                  D-erythrose 4-phosphate 1
                  D-erythrose 4-phosphate(2-) 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 20056
    subatomic particle 20054
      composite particle 20054
        hadron 20054
          baryon 20054
            nucleon 20054
              atomic nucleus 20054
                atom 20054
                  main group element atom 19956
                    p-block element atom 19956
                      carbon group element atom 19882
                        carbon atom 19875
                          organic molecular entity 19875
                            heteroorganic entity 19561
                              organochalcogen compound 19310
                                organooxygen compound 19243
                                  carbohydrates and carbohydrate derivatives 13928
                                    carbohydrate 13928
                                      monosaccharide 4364
                                        aldose 2711
                                          aldotetrose 1
                                            erythroses 1
                                              erythrose 1
                                                D-erythrose 1
                                                  4-deoxy-4-sulfo-D-erythrose(1-) 0
                                                  D-erythrose 4-phosphate 1
                                                  D-erythrose 4-phosphate(2-) 0
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