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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:D-erythrose
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Accession:CHEBI:27904 term browser browse the term
Definition:The D-enantiomer of erythrose.
Synonyms:exact_synonym: (2R,3R)-2,3,4-trihydroxybutanal;   D-erythro-tetrose
 related_synonym: Formula=C4H8O4;   InChI=1S/C4H8O4/c5-1-3(7)4(8)2-6/h1,3-4,6-8H,2H2/t3-,4+/m0/s1;   InChIKey=YTBSYETUWUMLBZ-IUYQGCFVSA-N;   SMILES=OC[C@@H](O)[C@@H](O)C=O
 alt_id: CHEBI:20926;   CHEBI:4113
 xref: Beilstein:5805561;   CAS:583-50-6;   HMDB:HMDB0002649;   KEGG:C01796;   KNApSAcK:C00007412;   PMID:16901854;   PMID:22841585;   PMID:23501397;   PMID:6229527;   PMID:6238947;   Reaxys:5805561;   Wikipedia:Erythrose
 cyclic_relationship: is_enantiomer_of CHEBI:21288


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D-erythrose 4-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Idh2 isocitrate dehydrogenase (NADP(+)) 2 multiple interactions
increases abundance
ISO Triazines inhibits the reaction [IDH2 protein mutant form results in increased abundance of erythrose 4-phosphate] CTD PMID:27469509 NCBI chr 1:141,874,354...141,893,674
Ensembl chr 1:141,866,283...141,893,705
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Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19787
    role 19734
      biological role 19734
        biochemical role 19282
          metabolite 19263
            eukaryotic metabolite 18908
              plant metabolite 17360
                D-erythrose 1
                  D-erythrose 4-phosphate 1
                  D-erythrose 4-phosphate(2-) 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19787
    subatomic particle 19784
      composite particle 19784
        hadron 19784
          baryon 19784
            nucleon 19784
              atomic nucleus 19784
                atom 19784
                  main group element atom 19672
                    p-block element atom 19672
                      carbon group element atom 19574
                        carbon atom 19563
                          organic molecular entity 19563
                            heteroorganic entity 19148
                              organochalcogen compound 18856
                                organooxygen compound 18778
                                  carbohydrates and carbohydrate derivatives 12180
                                    carbohydrate 12180
                                      monosaccharide 4023
                                        aldose 2537
                                          aldotetrose 1
                                            erythroses 1
                                              erythrose 1
                                                D-erythrose 1
                                                  D-erythrose 4-phosphate 1
                                                  D-erythrose 4-phosphate(2-) 0
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