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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:(S)-colchicine
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Accession:CHEBI:27882 term browser browse the term
Definition:A colchicine that has (S)-configuration. It is a secondary metabolite, has anti-inflammatory properties and is used to treat gout, crystal-induced joint inflammation, familial Mediterranean fever, and many other conditions.
Synonyms:exact_synonym: N-[(7S)-1,2,3,10-tetramethoxy-9-oxo-5,6,7,9-tetrahydrobenzo[a]heptalen-7-yl]acetamide
 related_synonym: (S)-N-(5,6,7,9-tetrahydro-1,2,3,10-tetramethoxy-9-oxobenzo[a]heptalen-7-yl)acetamide;   7alphaH-colchicine;   Colchicin;   Colchicine;   Colchisol;   Colcin;   Colcrys;   Colsaloid;   Condylon;   Formula=C22H25NO6;   Goutnil;   InChI=1S/C22H25NO6/c1-12(24)23-16-8-6-13-10-19(27-3)21(28-4)22(29-5)20(13)14-7-9-18(26-2)17(25)11-15(14)16/h7,9-11,16H,6,8H2,1-5H3,(H,23,24)/t16-/m0/s1;   InChIKey=IAKHMKGGTNLKSZ-INIZCTEOSA-N;   Kolkicin;   Mitigare;   SMILES=COC1=CC2=C(C(OC)=C1OC)C1=CC=C(OC)C(=O)C=C1[C@H](CC2)NC(C)=O;   colchicina;   colchicinum
 alt_id: CHEBI:3811
 xref: Beilstein:2228813;   CAS:64-86-8;   Chemspider:5933;   DrugBank:DB01394;   Drug_Central:726;   KEGG:C07592;   KEGG:D00570;   KNApSAcK:C00002327;   LINCS:LSM-5199
 xref_mesh: MESH:D003078
 xref: MetaCyc:CPD-9785;   PDBeChem:LOC;   PMID:16188942;   PMID:17619668;   PMID:18787557;   PMID:24530796;   PMID:28832953;   PMID:28912485;   PMID:28959419;   PMID:30565859;   PMID:32025680;   PMID:32426001;   PMID:32511763;   PMID:32837853;   PMID:32865380;   PMID:33100196;   PMID:33166069;   Wikipedia:Colchicine
 cyclic_relationship: is_enantiomer_of CHEBI:51074


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(S)-colchicine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca13 ATP binding cassette subfamily A member 13 affects response to substance ISO ABCA13 gene SNP affects the susceptibility to Colchicine CTD PMID:25622337 NCBI chr14:89,384,512...89,876,748
Ensembl chr14:89,384,512...89,714,917
JBrowse link
G Abcb11 ATP binding cassette subfamily B member 11 affects localization EXP Colchicine affects the localization of ABCB11 protein CTD PMID:12702492 PMID:15304119 NCBI chr 3:55,480,024...55,587,946
Ensembl chr 3:55,480,024...55,587,946
JBrowse link
G Abcb1a ATP binding cassette subfamily B member 1A affects transport
increases export
increases expression
multiple interactions
decreases response to substance
ISO ABCB1 protein affects the transport of Colchicine
ABCB1 protein results in increased export of Colchicine
Colchicine results in increased expression of ABCB1; Colchicine results in increased expression of ABCB1 mRNA
[MGMT protein co-treated with ABCB1 protein] results in decreased susceptibility to Colchicine; Colchicine inhibits the reaction [Verapamil analog results in increased activity of ABCB1 protein mutant form]
ABCB1 protein results in decreased susceptibility to Colchicine
CTD PMID:7905786 PMID:11792417 PMID:12711602 PMID:15112361 PMID:15342794 PMID:15725475 PMID:16007523 PMID:24759273 NCBI chr 4:22,339,829...22,517,642
Ensembl chr 4:22,133,521...22,425,515
JBrowse link
G Abcc1 ATP binding cassette subfamily C member 1 decreases response to substance ISO ABCC1 protein results in decreased susceptibility to Colchicine CTD PMID:12067707 NCBI chr10:549,537...672,235
Ensembl chr10:549,883...672,196
JBrowse link
G Abcc2 ATP binding cassette subfamily C member 2 multiple interactions EXP [Colchicine co-treated with JTE 013] inhibits the reaction [Taurolithocholic Acid results in decreased activity of ABCC2 protein] CTD PMID:31300867 NCBI chr 1:263,554,426...263,612,556
Ensembl chr 1:263,554,453...263,613,252
JBrowse link
G Abcc3 ATP binding cassette subfamily C member 3 affects localization EXP Colchicine affects the localization of ABCC3 protein CTD PMID:12702492 NCBI chr10:82,047,308...82,116,928
Ensembl chr10:82,047,863...82,117,109
JBrowse link
G Abcc4 ATP binding cassette subfamily C member 4 multiple interactions ISO Colchicine inhibits the reaction [Acetaminophen results in increased expression of ABCC4 protein] CTD PMID:18468992 NCBI chr15:103,695,415...103,927,980
Ensembl chr15:103,696,557...103,927,592
JBrowse link
G Ace angiotensin I converting enzyme multiple interactions
decreases activity
decreases expression
EXP carvedilol inhibits the reaction [Colchicine results in decreased activity of ACE protein]; Quercetin inhibits the reaction [Colchicine results in decreased activity of ACE protein]; resveratrol inhibits the reaction [Colchicine results in decreased activity of ACE protein]; Rivastigmine inhibits the reaction [Colchicine results in decreased expression of ACE protein] CTD PMID:17135773 PMID:17652827 PMID:18980205 PMID:18992766 NCBI chr10:94,170,766...94,213,831
Ensembl chr10:94,170,766...94,187,822
JBrowse link
G Acta2 actin alpha 2, smooth muscle multiple interactions EXP Colchicine inhibits the reaction [Dimethylnitrosamine results in increased expression of ACTA2 protein]; Colchicine inhibits the reaction [Ethanol results in increased expression of ACTA2 protein] CTD PMID:14726149 PMID:22446813 NCBI chr 1:252,537,614...252,550,394
Ensembl chr 1:252,537,615...252,550,394
JBrowse link
G Ahr aryl hydrocarbon receptor decreases activity ISO
EXP
Colchicine results in decreased activity of AHR protein CTD PMID:16611024 NCBI chr 6:54,963,990...55,001,806
Ensembl chr 6:54,963,990...55,001,464
JBrowse link
G Aif1 allograft inflammatory factor 1 decreases expression EXP Colchicine results in decreased expression of AIF1 mRNA CTD PMID:20624997 NCBI chr20:5,161,350...5,167,176
Ensembl chr20:5,161,333...5,166,448
JBrowse link
G Ak1 adenylate kinase 1 decreases expression EXP Colchicine results in decreased expression of AK1 mRNA CTD PMID:20624997 NCBI chr 3:11,652,143...11,659,135 JBrowse link
G Alb albumin affects expression
multiple interactions
ISO
EXP
Colchicine affects the expression of ALB protein
Colchicine inhibits the reaction [Carbon Tetrachloride results in increased expression of ALB protein]
CTD PMID:8574231 PMID:23146695 NCBI chr14:19,176,275...19,191,793
Ensembl chr14:19,176,277...19,191,863
JBrowse link
G Apln apelin decreases expression EXP Colchicine results in decreased expression of APLN mRNA CTD PMID:20624997 NCBI chr  X:134,856,719...134,866,210
Ensembl chr  X:134,856,726...134,866,210
JBrowse link
G Atxn1 ataxin 1 decreases expression ISO Colchicine results in decreased expression of ATXN1 mRNA CTD PMID:24211769 NCBI chr17:19,160,986...19,533,814
Ensembl chr17:19,249,952...19,533,814
JBrowse link
G Aurkb aurora kinase B increases expression ISO Colchicine results in increased expression of AURKB mRNA CTD PMID:21472861 NCBI chr10:55,625,860...55,632,399
Ensembl chr10:55,626,741...55,634,991
JBrowse link
G Avp arginine vasopressin decreases transport EXP Colchicine results in decreased transport of AVP protein CTD PMID:2453250 NCBI chr 3:123,117,482...123,119,460
Ensembl chr 3:123,117,492...123,119,460
JBrowse link
G Bax BCL2 associated X, apoptosis regulator increases expression ISO Colchicine results in increased expression of BAX protein CTD PMID:22342440 NCBI chr 1:101,451,801...101,457,207
Ensembl chr 1:101,451,802...101,457,207
JBrowse link
G Bcl2 BCL2, apoptosis regulator multiple interactions
decreases expression
EXP
ISO
Colchicine inhibits the reaction [Ethanol results in increased expression of BCL2 mRNA]
Colchicine results in decreased expression of BCL2 protein
CTD PMID:22342440 PMID:22446813 NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374
JBrowse link
G Bcl2l1 Bcl2-like 1 multiple interactions EXP [Diethylnitrosamine co-treated with Colchicine] results in decreased expression of BCL2L1 protein CTD PMID:11749691 NCBI chr 3:148,259,594...148,314,191
Ensembl chr 3:148,259,596...148,313,810
JBrowse link
G Bdnf brain-derived neurotrophic factor decreases transport EXP Colchicine results in decreased transport of BDNF protein CTD PMID:21310905 NCBI chr 3:100,768,637...100,819,216
Ensembl chr 3:100,768,637...100,819,210
JBrowse link
G Blm BLM RecQ like helicase decreases expression ISO Colchicine results in decreased expression of BLM mRNA CTD PMID:24211769 NCBI chr 1:142,246,773...142,332,616
Ensembl chr 1:142,246,790...142,332,588
JBrowse link
G Btg1 BTG anti-proliferation factor 1 decreases expression ISO Colchicine results in decreased expression of BTG1 mRNA CTD PMID:24211769 NCBI chr 7:37,812,831...37,815,088
Ensembl chr 7:37,812,831...37,815,088
JBrowse link
G Btg2 BTG anti-proliferation factor 2 decreases expression ISO Colchicine results in decreased expression of BTG2 mRNA CTD PMID:24211769 NCBI chr13:50,913,185...50,916,944
Ensembl chr13:50,913,180...50,916,982
JBrowse link
G Btg3 BTG anti-proliferation factor 3 decreases expression ISO Colchicine results in decreased expression of BTG3 mRNA CTD PMID:24211769 NCBI chr11:16,873,642...16,889,100
Ensembl chr11:16,873,646...16,889,201
JBrowse link
G C3 complement C3 increases expression EXP Colchicine results in increased expression of C3 mRNA CTD PMID:20624997 NCBI chr 9:9,721,137...9,747,084
Ensembl chr 9:9,721,105...9,747,167
JBrowse link
G Capn1 calpain 1 decreases expression EXP Colchicine results in decreased expression of CAPN1 mRNA CTD PMID:18255150 NCBI chr 1:221,346,081...221,370,965
Ensembl chr 1:221,346,066...221,370,322
JBrowse link
G Casp3 caspase 3 multiple interactions
increases activity
increases expression
increases cleavage
EXP
ISO
alsterpaullone inhibits the reaction [Colchicine results in increased activity of CASP3 protein]; alvocidib inhibits the reaction [Colchicine results in increased activity of CASP3 protein]; Lithium inhibits the reaction [Colchicine results in increased activity of CASP3 protein]; N-(4-methoxybenzyl)-N'-(5-nitro-1,3-thiazol-2-yl)urea inhibits the reaction [Colchicine results in increased activity of CASP3 protein]; SB 216763 inhibits the reaction [Colchicine results in increased activity of CASP3 protein]
Colchicine results in increased expression of CASP3 mRNA
Colchicine results in increased cleavage of CASP3 protein
CTD PMID:12941380 PMID:15005753 PMID:16478524 PMID:18255150 PMID:19815060 PMID:20300959 PMID:20624997 PMID:22342440 NCBI chr16:48,845,011...48,863,249
Ensembl chr16:48,845,012...48,863,204
JBrowse link
G Casp8 caspase 8 increases expression EXP Colchicine results in increased expression of CASP8 mRNA CTD PMID:18255150 NCBI chr 9:65,614,142...65,662,624
Ensembl chr 9:65,614,142...65,662,106
JBrowse link
G Casp9 caspase 9 increases activity ISO Colchicine results in increased activity of CASP9 protein CTD PMID:22342440 NCBI chr 5:160,356,211...160,373,774
Ensembl chr 5:160,355,833...160,373,778
JBrowse link
G Cat catalase increases expression EXP Colchicine results in increased expression of CAT mRNA CTD PMID:18255150 NCBI chr 3:93,379,872...93,412,058
Ensembl chr 3:93,379,874...93,412,058
JBrowse link
G Ccdc51 coiled-coil domain containing 51 decreases expression ISO Colchicine results in decreased expression of CCDC51 mRNA CTD PMID:24211769 NCBI chr 8:117,812,091...117,830,848
Ensembl chr 8:117,812,099...117,830,868
JBrowse link
G Ccl2 C-C motif chemokine ligand 2 increases expression EXP Colchicine results in increased expression of CCL2 mRNA CTD PMID:3119359 PMID:20624997 NCBI chr10:69,412,065...69,413,863
Ensembl chr10:69,412,017...69,413,870
JBrowse link
G Ccnb1 cyclin B1 increases expression ISO Colchicine results in increased expression of CCNB1 mRNA; Colchicine results in increased expression of CCNB1 protein CTD PMID:21472861 PMID:27769712 NCBI chr 2:30,782,133...30,791,106
Ensembl chr 2:30,783,915...30,791,221
JBrowse link
G Ccnd1 cyclin D1 increases expression ISO
EXP
Colchicine results in increased expression of CCND1 protein
Colchicine results in increased expression of CCND1 mRNA
CTD PMID:16495211 PMID:18255150 NCBI chr 1:218,090,750...218,100,447
Ensembl chr 1:218,090,750...218,100,325
JBrowse link
G Ccne2 cyclin E2 decreases expression ISO Colchicine results in decreased expression of CCNE2 mRNA CTD PMID:24211769 NCBI chr 5:24,434,077...24,446,406
Ensembl chr 5:24,434,872...24,446,406
JBrowse link
G Cd14 CD14 molecule increases expression EXP Colchicine results in increased expression of CD14 mRNA CTD PMID:20624997 NCBI chr18:29,560,341...29,562,290
Ensembl chr18:29,560,365...29,562,153
JBrowse link
G Cd44 CD44 molecule (Indian blood group) increases expression EXP Colchicine results in increased expression of CD44 mRNA CTD PMID:20624997 NCBI chr 3:92,695,083...92,783,820
Ensembl chr 3:92,696,313...92,783,658
JBrowse link
G Cd59 CD59 molecule increases mutagenesis ISO Colchicine results in increased mutagenesis of CD59 protein CTD PMID:17045307 NCBI chr 3:94,010,481...94,028,660
Ensembl chr 3:94,010,475...94,028,621
JBrowse link
G Cdc25a cell division cycle 25A decreases expression ISO Colchicine results in decreased expression of CDC25A mRNA CTD PMID:24211769 NCBI chr 8:117,953,223...117,971,552
Ensembl chr 8:117,953,444...117,971,519
JBrowse link
G Cdc6 cell division cycle 6 decreases expression ISO Colchicine results in decreased expression of CDC6 mRNA CTD PMID:24211769 NCBI chr10:86,819,477...86,833,301
Ensembl chr10:86,819,472...86,833,402
JBrowse link
G Cdh1 cadherin 1 affects activity ISO Colchicine affects the activity of CDH1 protein CTD PMID:10413674 NCBI chr19:38,768,467...38,838,395
Ensembl chr19:38,768,467...38,838,395
JBrowse link
G Cdk2 cyclin dependent kinase 2 increases expression EXP Colchicine results in increased expression of CDK2 mRNA CTD PMID:18255150 NCBI chr 7:3,124,953...3,132,533
Ensembl chr 7:3,124,954...3,132,457
JBrowse link
G Cdk5 cyclin-dependent kinase 5 increases expression
multiple interactions
EXP Colchicine results in increased expression of CDK5 protein
alvocidib inhibits the reaction [Colchicine results in increased expression of CDK5 protein]
CTD PMID:12941380 NCBI chr 4:7,282,945...7,287,427
Ensembl chr 4:7,282,948...7,288,383
JBrowse link
G Cdkn1a cyclin-dependent kinase inhibitor 1A increases expression
decreases expression
EXP
ISO
Colchicine results in increased expression of CDKN1A mRNA
Colchicine results in increased expression of CDKN1A protein
Colchicine results in decreased expression of CDKN1A mRNA
CTD PMID:20624997 PMID:24211769 PMID:27358234 NCBI chr20:6,348,422...6,358,864
Ensembl chr20:6,351,458...6,358,864
JBrowse link
G Cdkn3 cyclin-dependent kinase inhibitor 3 decreases expression EXP Colchicine results in decreased expression of CDKN3 mRNA CTD PMID:20624997 NCBI chr15:23,553,171...23,564,538
Ensembl chr15:23,553,128...23,564,535
JBrowse link
G Celf2 CUGBP, Elav-like family member 2 multiple interactions
increases expression
ISO 2-cyclopentyl-5-(5-isoquinolylsulfonyl)-6-nitro-1H-benzo(D)imidazole inhibits the reaction [Colchicine results in increased expression of CELF2 mRNA] CTD PMID:11478917 NCBI chr17:75,259,269...75,660,154
Ensembl chr17:75,352,389...75,654,951
JBrowse link
G Chaf1a chromatin assembly factor 1 subunit A decreases expression ISO Colchicine results in decreased expression of CHAF1A mRNA CTD PMID:24211769 NCBI chr 9:11,000,869...11,027,631
Ensembl chr 9:11,001,129...11,027,506
JBrowse link
G Chaf1b chromatin assembly factor 1 subunit B decreases expression ISO Colchicine results in decreased expression of CHAF1B mRNA CTD PMID:24211769 NCBI chr11:34,101,248...34,121,371
Ensembl chr11:34,101,197...34,121,378
JBrowse link
G Cln8 CLN8, transmembrane ER and ERGIC protein decreases expression ISO Colchicine results in decreased expression of CLN8 mRNA CTD PMID:24211769 NCBI chr16:79,828,321...79,838,212
Ensembl chr16:79,828,324...79,838,212
JBrowse link
G Coa7 cytochrome c oxidase assembly factor 7 decreases expression ISO Colchicine results in decreased expression of COA7 mRNA CTD PMID:24211769 NCBI chr 5:127,925,726...127,936,516
Ensembl chr 5:127,925,726...127,936,509
JBrowse link
G Cp ceruloplasmin increases expression EXP Colchicine results in increased expression of CP mRNA CTD PMID:20624997 NCBI chr 2:104,744,249...104,803,034
Ensembl chr 2:104,744,461...104,799,853
JBrowse link
G Cpt2 carnitine palmitoyltransferase 2 decreases expression ISO Colchicine results in decreased expression of CPT2 mRNA CTD PMID:24211769 NCBI chr 5:127,505,646...127,523,016
Ensembl chr 5:127,505,614...127,523,089
JBrowse link
G Crh corticotropin releasing hormone decreases expression
increases expression
EXP Colchicine results in decreased expression of CRH protein
Colchicine results in increased expression of CRH mRNA
CTD PMID:1850078 PMID:2453250 NCBI chr 2:104,459,999...104,461,863
Ensembl chr 2:104,459,999...104,461,863
JBrowse link
G Csf2 colony stimulating factor 2 multiple interactions ISO Colchicine inhibits the reaction [kaempferol results in increased secretion of CSF2 protein]; Colchicine inhibits the reaction [Quercetin results in increased secretion of CSF2 protein] CTD PMID:18346843 NCBI chr10:39,602,089...39,604,070
Ensembl chr10:39,602,089...39,604,070
JBrowse link
G Cxcl1 C-X-C motif chemokine ligand 1 increases expression EXP Colchicine results in increased expression of CXCL1 mRNA CTD PMID:3119359 NCBI chr14:18,743,678...18,745,457
Ensembl chr14:18,743,685...18,745,457
JBrowse link
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 multiple interactions ISO
EXP
Colchicine inhibits the reaction [Tetrachlorodibenzodioxin results in increased activity of CYP1A1 protein]; Colchicine inhibits the reaction [Tetrachlorodibenzodioxin results in increased expression of CYP1A1 mRNA]; Colchicine inhibits the reaction [Tetrachlorodibenzodioxin results in increased expression of CYP1A1 protein] CTD PMID:16611024 NCBI chr 8:62,472,087...62,478,122
Ensembl chr 8:62,472,095...62,478,147
JBrowse link
G Cyp3a62 cytochrome P450, family 3, subfamily a, polypeptide 62 affects metabolic processing ISO CYP3A4 protein affects the metabolism of Colchicine CTD PMID:15914514 PMID:16007523 NCBI chr12:18,679,809...18,709,397
Ensembl chr12:18,678,594...18,709,397
JBrowse link
G Ddit3 DNA-damage inducible transcript 3 increases expression ISO Colchicine results in increased expression of DDIT3 protein CTD PMID:27358234 NCBI chr 7:70,578,564...70,585,074
Ensembl chr 7:70,580,198...70,585,084
JBrowse link
G Ddit4 DNA-damage-inducible transcript 4 decreases expression ISO Colchicine results in decreased expression of DDIT4 mRNA CTD PMID:24211769 NCBI chr20:29,509,283...29,511,382
Ensembl chr20:29,509,289...29,511,382
JBrowse link
G Drd3 dopamine receptor D3 decreases expression EXP Colchicine results in decreased expression of DRD3 mRNA CTD PMID:7878047 NCBI chr11:61,819,102...61,883,223
Ensembl chr11:61,822,077...61,874,327
JBrowse link
G Dusp14 dual specificity phosphatase 14 decreases expression ISO Colchicine results in decreased expression of DUSP14 mRNA CTD PMID:24211769 NCBI chr10:71,363,688...71,383,602
Ensembl chr10:71,363,688...71,383,602
JBrowse link
G E2f1 E2F transcription factor 1 decreases expression ISO Colchicine results in decreased expression of E2F1 mRNA CTD PMID:24211769 NCBI chr 3:150,062,895...150,073,721
Ensembl chr 3:150,047,826...150,073,721
JBrowse link
G Ednrb endothelin receptor type B increases expression EXP Colchicine results in increased expression of EDNRB mRNA CTD PMID:20624997 NCBI chr15:88,004,775...88,036,354
Ensembl chr15:88,006,977...88,036,354
JBrowse link
G Enc1 ectodermal-neural cortex 1 decreases expression ISO Colchicine results in decreased expression of ENC1 mRNA CTD PMID:24211769 NCBI chr 2:28,049,217...28,061,023
Ensembl chr 2:28,049,217...28,061,029
JBrowse link
G Eprs glutamyl-prolyl-tRNA synthetase increases expression EXP Colchicine results in increased expression of EPRS mRNA CTD PMID:20624997 NCBI chr13:103,300,911...103,371,651
Ensembl chr13:103,300,932...103,371,577
JBrowse link
G Esm1 endothelial cell-specific molecule 1 decreases expression EXP Colchicine results in decreased expression of ESM1 mRNA CTD PMID:20624997 NCBI chr 2:45,104,392...45,113,130
Ensembl chr 2:45,104,305...45,113,131
JBrowse link
G Esr1 estrogen receptor 1 multiple interactions ISO Colchicine binds to and results in decreased activity of ESR1 protein CTD PMID:25752796 NCBI chr 1:41,192,029...41,594,799
Ensembl chr 1:41,192,824...41,594,796
JBrowse link
G F2 coagulation factor II affects activity ISO Colchicine affects the activity of F2 protein CTD PMID:8574231 NCBI chr 3:80,529,468...80,542,993
Ensembl chr 3:80,529,428...80,543,031
JBrowse link
G F3 coagulation factor III, tissue factor increases expression EXP Colchicine results in increased expression of F3 mRNA CTD PMID:20624997 NCBI chr 2:225,310,686...225,322,281
Ensembl chr 2:225,310,624...225,322,272
JBrowse link
G Fas Fas cell surface death receptor increases expression
decreases expression
ISO Colchicine results in increased expression of FAS mRNA
Colchicine results in decreased expression of FAS protein
CTD PMID:10675359 NCBI chr 1:252,589,785...252,624,790
Ensembl chr 1:252,589,785...252,624,790
JBrowse link
G Fcgr2b Fc fragment of IgG receptor IIb increases expression EXP Colchicine results in increased expression of FCGR2B mRNA CTD PMID:20624997 NCBI chr13:89,329,298...89,343,916
Ensembl chr13:89,327,794...89,433,815
JBrowse link
G Fdxr ferredoxin reductase decreases expression ISO Colchicine results in decreased expression of FDXR mRNA CTD PMID:24211769 NCBI chr10:103,817,724...103,826,413
Ensembl chr10:103,817,704...103,826,448
JBrowse link
G Fgf2 fibroblast growth factor 2 affects expression EXP Colchicine affects the expression of FGF2 protein CTD PMID:7714246 NCBI chr 2:124,081,072...124,134,133
Ensembl chr 2:124,081,072...124,134,681
JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit multiple interactions
increases expression
EXP Colchicine results in increased expression of and affects the localization of FOS protein
Colchicine results in increased expression of FOS mRNA
CTD PMID:3119359 PMID:7537689 NCBI chr 6:109,300,433...109,303,299
Ensembl chr 6:109,300,433...109,303,299
JBrowse link
G Foxj2 forkhead box J2 decreases expression ISO Colchicine results in decreased expression of FOXJ2 mRNA CTD PMID:24211769 NCBI chr 4:155,653,446...155,679,815
Ensembl chr 4:155,653,718...155,679,793
JBrowse link
G Fzd1 frizzled class receptor 1 decreases expression ISO Colchicine results in decreased expression of FZD1 mRNA CTD PMID:24211769 NCBI chr 4:26,470,864...26,475,262
Ensembl chr 4:26,470,864...26,475,262
JBrowse link
G Gadd45a growth arrest and DNA-damage-inducible, alpha increases expression EXP Colchicine results in increased expression of GADD45A mRNA CTD PMID:20624997 NCBI chr 4:97,782,512...97,784,814
Ensembl chr 4:97,782,512...97,784,842
JBrowse link
G Gadd45b growth arrest and DNA-damage-inducible, beta increases expression EXP Colchicine results in increased expression of GADD45B mRNA CTD PMID:20624997 NCBI chr 7:11,646,283...11,648,338
Ensembl chr 7:11,646,269...11,648,322
JBrowse link
G Gadd45g growth arrest and DNA-damage-inducible, gamma increases expression EXP Colchicine results in increased expression of GADD45G mRNA CTD PMID:20624997 NCBI chr17:13,391,474...13,393,219
Ensembl chr17:13,391,467...13,393,243
JBrowse link
G Gas7 growth arrest specific 7 decreases expression EXP Colchicine results in decreased expression of GAS7 mRNA CTD PMID:20624997 NCBI chr10:54,010,723...54,240,805
Ensembl chr10:54,126,486...54,236,476
JBrowse link
G Gch1 GTP cyclohydrolase 1 decreases expression ISO Colchicine results in decreased expression of GCH1 mRNA CTD PMID:24211769 NCBI chr15:23,935,011...23,968,971
Ensembl chr15:23,934,585...23,969,011
JBrowse link
G Gdf15 growth differentiation factor 15 decreases expression ISO Colchicine results in decreased expression of GDF15 mRNA CTD PMID:24211769 NCBI chr16:20,555,395...20,557,978
Ensembl chr16:20,555,395...20,557,978
JBrowse link
G Gja1 gap junction protein, alpha 1 multiple interactions EXP Colchicine inhibits the reaction [DDT results in increased degradation of GJA1 protein modified form]; Colchicine inhibits the reaction [Hexachlorocyclohexane results in increased degradation of GJA1 protein modified form] CTD PMID:8824497 NCBI chr20:37,876,650...37,889,097
Ensembl chr20:37,876,650...37,889,089
JBrowse link
G Gpx1 glutathione peroxidase 1 increases expression EXP Colchicine results in increased expression of GPX1 mRNA CTD PMID:18255150 NCBI chr 8:117,117,430...117,118,528
Ensembl chr 8:117,117,430...117,118,522
JBrowse link
G Grpel1 GrpE-like 1, mitochondrial decreases expression ISO Colchicine results in decreased expression of GRPEL1 mRNA CTD PMID:24211769 NCBI chr14:79,458,951...79,464,782
Ensembl chr14:79,458,963...79,464,770
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta decreases expression EXP Colchicine results in decreased expression of GSK3B mRNA CTD PMID:18255150 NCBI chr11:65,060,884...65,208,842
Ensembl chr11:65,066,235...65,209,268
JBrowse link
G Hmox1 heme oxygenase 1 increases expression
affects expression
EXP Colchicine results in increased expression of HMOX1 mRNA
Colchicine affects the expression of HMOX1 mRNA
CTD PMID:20624997 PMID:22954530 NCBI chr19:14,508,634...14,515,455
Ensembl chr19:14,508,616...14,515,456
JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 increases expression ISO Colchicine results in increased expression of HSPA5 protein CTD PMID:27358234 NCBI chr 3:13,838,304...13,842,763
Ensembl chr 3:13,838,304...13,842,762
JBrowse link
G Icam1 intercellular adhesion molecule 1 increases expression EXP Colchicine results in increased expression of ICAM1 mRNA CTD PMID:20624997 NCBI chr 8:22,035,287...22,047,049
Ensembl chr 8:22,035,256...22,047,059
JBrowse link
G Id3 inhibitor of DNA binding 3, HLH protein decreases expression ISO Colchicine results in decreased expression of ID3 mRNA CTD PMID:24211769 NCBI chr 5:154,489,603...154,491,172
Ensembl chr 5:154,489,590...154,491,223
JBrowse link
G Ifng interferon gamma multiple interactions ISO [Colchicine co-treated with Ionomycin co-treated with Tetradecanoylphorbol Acetate] results in increased expression of IFNG mRNA CTD PMID:29594315 NCBI chr 7:61,337,383...61,341,419
Ensembl chr 7:61,337,381...61,341,419
JBrowse link
G Ikbkb inhibitor of nuclear factor kappa B kinase subunit beta increases phosphorylation
affects response to substance
multiple interactions
ISO Colchicine results in increased phosphorylation of IKBKB protein
IKBKB protein affects the susceptibility to Colchicine
Colchicine results in decreased localization of [IKBKB protein binds to NFKBIA protein]
CTD PMID:17029595 PMID:20159942 NCBI chr16:74,177,233...74,230,809
Ensembl chr16:74,177,215...74,230,815
JBrowse link
G Il1a interleukin 1 alpha multiple interactions ISO Colchicine inhibits the reaction [IL1A protein results in increased expression of VCAM1 protein] CTD PMID:11154858 NCBI chr 3:121,824,712...121,836,122
Ensembl chr 3:121,825,412...121,836,086
JBrowse link
G Il1b interleukin 1 beta increases expression EXP
ISO
Colchicine results in increased expression of IL1B mRNA CTD PMID:20624997 PMID:29594315 NCBI chr 3:121,876,256...121,882,637
Ensembl chr 3:121,876,263...121,882,726
JBrowse link
G Il2 interleukin 2 decreases expression
multiple interactions
ISO Colchicine results in decreased expression of IL2 protein
[Colchicine co-treated with Ionomycin co-treated with Tetradecanoylphorbol Acetate] results in increased expression of IL2 mRNA
CTD PMID:1553933 PMID:29594315 NCBI chr 2:123,847,150...123,851,854
Ensembl chr 2:123,847,150...123,851,854
JBrowse link
G Il6 interleukin 6 increases expression
multiple interactions
EXP Colchicine results in increased expression of IL6 mRNA
Colchicine inhibits the reaction [Ethanol results in increased expression of IL6 protein]
CTD PMID:20624997 PMID:22446813 NCBI chr 4:3,043,231...3,047,807
Ensembl chr 4:3,043,231...3,047,807
JBrowse link
G Inha inhibin subunit alpha decreases expression EXP Colchicine results in decreased expression of INHA mRNA CTD PMID:20624997 NCBI chr 9:82,700,482...82,703,383
Ensembl chr 9:82,700,468...82,703,400
JBrowse link
G Isg20l2 interferon stimulated exonuclease gene 20-like 2 decreases expression ISO Colchicine results in decreased expression of ISG20L2 mRNA CTD PMID:24211769 NCBI chr 2:187,302,192...187,311,677
Ensembl chr 2:187,302,192...187,311,676
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit increases phosphorylation
multiple interactions
increases activity
ISO
EXP
Colchicine results in increased phosphorylation of JUN protein
3,9-bis((ethylthio)methyl)-K-252a inhibits the reaction [Colchicine results in increased phosphorylation of JUN protein]; Colchicine results in increased expression of and results in increased phosphorylation of JUN protein
TP53 protein affects the reaction [Colchicine results in increased phosphorylation of JUN protein]
3,9-bis((ethylthio)methyl)-K-252a inhibits the reaction [Colchicine results in increased activity of JUN protein]; Colchicine results in increased phosphorylation of and results in increased localization of JUN protein
CTD PMID:12221076 PMID:16478524 NCBI chr 5:114,011,184...114,014,277
Ensembl chr 5:114,011,189...114,014,277
JBrowse link
G Kif20a kinesin family member 20A decreases expression ISO Colchicine results in decreased expression of KIF20A mRNA CTD PMID:24211769 NCBI chr18:27,424,328...27,432,814
Ensembl chr18:27,424,328...27,432,814
JBrowse link
G Klf6 Kruppel-like factor 6 increases expression ISO Colchicine results in increased expression of KLF6 mRNA CTD PMID:24211769 NCBI chr17:67,887,939...67,945,052
Ensembl chr17:67,887,939...67,945,037
JBrowse link
G Krt18 keratin 18 decreases expression ISO Colchicine results in decreased expression of KRT18 protein CTD PMID:11259854 NCBI chr 7:143,629,455...143,633,131
Ensembl chr 7:143,629,455...143,633,131
JBrowse link
G Lhx2 LIM homeobox 2 decreases expression ISO Colchicine results in decreased expression of LHX2 mRNA CTD PMID:24211769 NCBI chr 3:22,628,674...22,658,447
Ensembl chr 3:22,640,545...22,658,446
JBrowse link
G LOC102548695 zinc finger protein 45-like decreases expression ISO Colchicine results in decreased expression of ZNF45 mRNA CTD PMID:24211769 NCBI chr 1:81,158,743...81,173,245
Ensembl chr 1:81,159,107...81,163,689
JBrowse link
G LOC683674 similar to Protein C7orf26 homolog decreases expression ISO Colchicine results in decreased expression of C7ORF26 mRNA CTD PMID:24211769 NCBI chr12:13,299,651...13,313,733
Ensembl chr12:13,299,859...13,313,358
JBrowse link
G Lrp2 LDL receptor related protein 2 affects localization EXP Colchicine affects the localization of LRP2 protein CTD PMID:25588984 NCBI chr 3:55,665,153...55,822,484
Ensembl chr 3:55,665,145...55,822,551
JBrowse link
G Lrrc47 leucine rich repeat containing 47 decreases expression ISO Colchicine results in decreased expression of LRRC47 mRNA CTD PMID:24211769 NCBI chr 5:171,297,850...171,307,682
Ensembl chr 5:171,297,850...171,307,682
JBrowse link
G Mapk8 mitogen-activated protein kinase 8 increases phosphorylation
multiple interactions
ISO Colchicine results in increased phosphorylation of MAPK8 protein
TP53 protein affects the reaction [Colchicine results in increased phosphorylation of MAPK8 protein]
CTD PMID:12221076 NCBI chr16:9,620,854...9,709,342
Ensembl chr16:9,625,177...9,709,347
JBrowse link
G Mapk9 mitogen-activated protein kinase 9 increases phosphorylation
multiple interactions
ISO Colchicine results in increased phosphorylation of MAPK9 protein
TP53 protein affects the reaction [Colchicine results in increased phosphorylation of MAPK9 protein]
CTD PMID:12221076 NCBI chr10:35,333,859...35,374,364
Ensembl chr10:35,333,859...35,374,355
JBrowse link
G Mapt microtubule-associated protein tau decreases expression ISO Colchicine results in decreased expression of MAPT protein CTD PMID:16930453 NCBI chr10:92,289,002...92,386,517
Ensembl chr10:92,288,910...92,386,517
JBrowse link
G Mcm10 minichromosome maintenance 10 replication initiation factor decreases expression ISO Colchicine results in decreased expression of MCM10 mRNA CTD PMID:24211769 NCBI chr17:77,224,218...77,245,486
Ensembl chr17:77,224,112...77,246,478
JBrowse link
G Mgmt O-6-methylguanine-DNA methyltransferase multiple interactions ISO [MGMT protein co-treated with ABCB1 protein] results in decreased susceptibility to Colchicine CTD PMID:11792417 NCBI chr 1:209,237,255...209,464,189
Ensembl chr 1:209,237,233...209,464,190
JBrowse link
G Mpo myeloperoxidase multiple interactions EXP Colchicine inhibits the reaction [Ethanol results in increased activity of MPO protein] CTD PMID:22446813 NCBI chr10:75,087,892...75,098,260
Ensembl chr10:75,087,892...75,098,260
JBrowse link
G Mrm2 mitochondrial rRNA methyltransferase 2 decreases expression ISO Colchicine results in decreased expression of MRM2 mRNA CTD PMID:24211769 NCBI chr12:16,398,749...16,403,656
Ensembl chr12:16,398,749...16,403,656
JBrowse link
G Msh6 mutS homolog 6 decreases expression ISO Colchicine results in decreased expression of MSH6 mRNA CTD PMID:24211769 NCBI chr 6:11,644,565...11,662,389
Ensembl chr 6:11,644,578...11,662,499
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor increases expression EXP Colchicine results in increased expression of MYC mRNA CTD PMID:3119359 PMID:20624997 NCBI chr 7:102,586,313...102,591,240
Ensembl chr 7:102,586,313...102,591,240
JBrowse link
G Myt1 myelin transcription factor 1 increases phosphorylation ISO Colchicine results in increased phosphorylation of MYT1 protein CTD PMID:16611024 NCBI chr 3:177,281,365...177,341,550
Ensembl chr 3:177,310,753...177,341,547
JBrowse link
G Nbn nibrin increases expression EXP Colchicine results in increased expression of NBN mRNA CTD PMID:20624997 NCBI chr 5:29,622,347...29,656,877
Ensembl chr 5:29,622,281...29,656,864
JBrowse link
G Ncoa2 nuclear receptor coactivator 2 multiple interactions ISO Colchicine inhibits the reaction [Chenodeoxycholic Acid promotes the reaction [NR1H4 protein affects the localization of NCOA2 protein]] CTD PMID:25257666 NCBI chr 5:5,466,544...5,696,540
Ensembl chr 5:5,616,483...5,694,598
JBrowse link
G Ndufs4 NADH:ubiquinone oxidoreductase subunit S4 affects response to substance ISO NDUFS4 protein affects the susceptibility to Colchicine CTD PMID:21383081 NCBI chr 2:46,372,488...46,476,162
Ensembl chr 2:46,372,518...46,476,203
JBrowse link
G Nfatc4 nuclear factor of activated T-cells 4 decreases localization ISO Colchicine results in decreased localization of NFATC4 protein CTD PMID:17044076 NCBI chr15:34,493,163...34,502,238
Ensembl chr15:34,493,138...34,504,326
JBrowse link
G Nfkbia NFKB inhibitor alpha increases phosphorylation
multiple interactions
ISO Colchicine results in increased phosphorylation of NFKBIA protein
Colchicine results in decreased localization of [IKBKB protein binds to NFKBIA protein]
CTD PMID:17029595 NCBI chr 6:76,267,227...76,270,457
Ensembl chr 6:76,267,228...76,270,457
JBrowse link
G Nos1 nitric oxide synthase 1 increases expression EXP Colchicine results in increased expression of NOS1 protein CTD PMID:7537689 NCBI chr12:44,214,949...44,405,530
Ensembl chr12:44,213,943...44,520,341
JBrowse link
G Nos2 nitric oxide synthase 2 multiple interactions EXP Colchicine inhibits the reaction [Carbon Tetrachloride results in increased expression of NOS2 mRNA] CTD PMID:23146695 NCBI chr10:66,188,290...66,221,621
Ensembl chr10:66,189,786...66,313,190
JBrowse link
G Nptx1 neuronal pentraxin 1 increases expression EXP Colchicine results in increased expression of NPTX1 mRNA CTD PMID:18255150 NCBI chr10:108,682,637...108,691,592
Ensembl chr10:108,682,638...108,691,367
JBrowse link
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 multiple interactions ISO Colchicine inhibits the reaction [Chenodeoxycholic Acid promotes the reaction [NR1H4 protein affects the localization of NCOA2 protein]]; Colchicine inhibits the reaction [pregna-4,17-diene-3,16-dione results in decreased activity of NR1H4 protein] CTD PMID:25257666 NCBI chr 7:30,003,429...30,162,095
Ensembl chr 7:30,003,429...30,162,056
JBrowse link
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 multiple interactions
increases degradation
increases activity
ISO Colchicine results in decreased localization of and results in decreased activity of NR3C1 protein
Colchicine results in increased degradation of NR3C1 protein
Colchicine results in increased activity of NR3C1 protein
CTD PMID:15744361 PMID:20448266 NCBI chr18:31,728,373...32,704,022
Ensembl chr18:31,728,373...31,749,647
JBrowse link
G Nts neurotensin increases expression EXP Colchicine results in increased expression of NTS mRNA CTD PMID:1850078 NCBI chr 7:44,111,594...44,120,998
Ensembl chr 7:44,111,151...44,121,130
JBrowse link
G Odc1 ornithine decarboxylase 1 multiple interactions
increases expression
ISO
EXP
Colchicine inhibits the reaction [Tetradecanoylphorbol Acetate results in increased activity of ODC1 protein]
Colchicine results in increased expression of ODC1 mRNA
CTD PMID:3119359 PMID:9270009 NCBI chr 6:42,852,529...42,859,142
Ensembl chr 6:42,852,683...42,859,927
JBrowse link
G Orai3 ORAI calcium release-activated calcium modulator 3 decreases expression ISO Colchicine results in decreased expression of ORAI3 mRNA CTD PMID:24211769 NCBI chr 1:199,217,504...199,222,363
Ensembl chr 1:199,217,016...199,222,851
JBrowse link
G Palb2 partner and localizer of BRCA2 decreases expression ISO Colchicine results in decreased expression of PALB2 mRNA CTD PMID:24211769 NCBI chr 1:192,064,586...192,088,547
Ensembl chr 1:192,064,589...192,088,520
JBrowse link
G Pawr pro-apoptotic WT1 regulator increases expression
multiple interactions
EXP Colchicine results in increased expression of PAWR protein
alvocidib inhibits the reaction [Colchicine results in increased expression of PAWR protein]
CTD PMID:12941380 NCBI chr 7:51,273,764...51,353,700
Ensembl chr 7:51,273,771...51,353,068
JBrowse link
G Pelo pelota mRNA surveillance and ribosome rescue factor decreases expression ISO Colchicine results in decreased expression of PELO mRNA CTD PMID:24211769 NCBI chr 2:47,266,758...47,268,526
Ensembl chr 2:47,266,738...47,268,625
JBrowse link
G Phlda3 pleckstrin homology-like domain, family A, member 3 decreases expression ISO Colchicine results in decreased expression of PHLDA3 mRNA CTD PMID:24211769 NCBI chr13:52,588,917...52,592,002
Ensembl chr13:52,588,917...52,592,001
JBrowse link
G Pidd1 p53-induced death domain protein 1 decreases expression ISO Colchicine results in decreased expression of PIDD1 mRNA CTD PMID:24211769 NCBI chr 1:214,418,751...214,423,959
Ensembl chr 1:214,419,240...214,423,881
JBrowse link
G Plagl1 PLAG1 like zinc finger 1 increases expression EXP Colchicine results in increased expression of PLAGL1 mRNA CTD PMID:20624997 NCBI chr 1:7,219,587...7,270,169
Ensembl chr 1:7,252,349...7,259,035
JBrowse link
G Plat plasminogen activator, tissue type increases expression EXP Colchicine results in increased expression of PLAT mRNA CTD PMID:20624997 NCBI chr16:74,098,263...74,122,897
Ensembl chr16:74,098,260...74,122,889
JBrowse link
G Plaur plasminogen activator, urokinase receptor increases expression EXP Colchicine results in increased expression of PLAUR mRNA CTD PMID:20624997 NCBI chr 1:81,328,171...81,344,954
Ensembl chr 1:81,328,183...81,344,708
JBrowse link
G Plekhf1 pleckstrin homology and FYVE domain containing 1 decreases expression ISO Colchicine results in decreased expression of PLEKHF1 mRNA CTD PMID:24211769 NCBI chr 1:94,609,041...94,616,565
Ensembl chr 1:94,609,377...94,610,854
JBrowse link
G Plxnb2 plexin B2 decreases expression ISO Colchicine results in decreased expression of PLXNB2 mRNA CTD PMID:24211769 NCBI chr 7:130,135,484...130,161,568
Ensembl chr 7:130,135,464...130,151,880
JBrowse link
G Pomc proopiomelanocortin increases secretion EXP Colchicine results in increased secretion of POMC protein CTD PMID:2453250 NCBI chr 6:28,382,937...28,388,771
Ensembl chr 6:28,382,962...28,388,967
JBrowse link
G Ppm1d protein phosphatase, Mg2+/Mn2+ dependent, 1D decreases expression ISO Colchicine results in decreased expression of PPM1D mRNA CTD PMID:24211769 NCBI chr10:72,909,550...72,945,884
Ensembl chr10:72,909,550...72,945,884
JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha increases expression ISO Colchicine results in increased expression of PPP1CA protein CTD PMID:16495211 NCBI chr 1:219,439,953...219,443,570
Ensembl chr 1:219,439,953...219,443,570
JBrowse link
G Ppp1r15a protein phosphatase 1, regulatory subunit 15A increases expression EXP Colchicine results in increased expression of PPP1R15A mRNA CTD PMID:20624997 NCBI chr 1:101,511,899...101,515,043
Ensembl chr 1:101,511,901...101,514,974
JBrowse link
G Prkab1 protein kinase AMP-activated non-catalytic subunit beta 1 decreases expression ISO Colchicine results in decreased expression of PRKAB1 mRNA CTD PMID:24211769 NCBI chr12:46,316,298...46,326,789
Ensembl chr12:46,316,236...46,326,790
JBrowse link
G Psmc3ip PSMC3 interacting protein decreases expression ISO Colchicine results in decreased expression of PSMC3IP mRNA CTD PMID:24211769 NCBI chr10:89,002,109...89,006,075
Ensembl chr10:89,002,116...89,005,213
JBrowse link
G Ptk2b protein tyrosine kinase 2 beta multiple interactions
increases phosphorylation
ISO 2-cyclopentyl-5-(5-isoquinolylsulfonyl)-6-nitro-1H-benzo(D)imidazole inhibits the reaction [Colchicine results in increased phosphorylation of PTK2B protein] CTD PMID:11478917 NCBI chr15:42,827,306...42,947,796
Ensembl chr15:42,827,310...42,947,656
JBrowse link
G Ptp4a1 protein tyrosine phosphatase 4A1 decreases expression ISO Colchicine results in decreased expression of PTP4A1 mRNA CTD PMID:24211769 NCBI chr 9:37,223,363...37,254,222
Ensembl chr 9:37,223,729...37,231,291
JBrowse link
G Pus3 pseudouridine synthase 3 decreases expression ISO Colchicine results in decreased expression of PUS3 mRNA CTD PMID:24211769 NCBI chr 8:36,760,874...36,769,167
Ensembl chr 8:36,766,977...36,769,162
JBrowse link
G Rad51c RAD51 paralog C decreases expression ISO Colchicine results in decreased expression of RAD51C mRNA CTD PMID:24211769 NCBI chr10:74,697,713...74,724,004
Ensembl chr10:74,697,716...74,724,472
JBrowse link
G Ralbp1 ralA binding protein 1 multiple interactions
affects transport
ISO Colchicine inhibits the reaction [RALBP1 protein affects the transport of Leukotriene C4]
RALBP1 protein affects the transport of Colchicine
CTD PMID:15386349 NCBI chr 9:113,579,107...113,598,477
Ensembl chr 9:113,579,107...113,598,480
JBrowse link
G Rap2b RAP2B, member of RAS oncogene family decreases expression ISO Colchicine results in decreased expression of RAP2B mRNA CTD PMID:24211769 NCBI chr 2:151,685,251...151,685,802
Ensembl chr 2:151,685,251...151,685,802
JBrowse link
G Rassf1 Ras association domain family member 1 increases expression EXP Colchicine results in increased expression of RASSF1 mRNA CTD PMID:20624997 NCBI chr 8:116,307,149...116,318,289
Ensembl chr 8:116,307,141...116,318,289
JBrowse link
G Rb1 RB transcriptional corepressor 1 multiple interactions ISO Colchicine results in decreased phosphorylation of and results in decreased activity of RB1 protein CTD PMID:16495211 NCBI chr15:55,081,582...55,209,060
Ensembl chr15:55,083,140...55,209,342
JBrowse link
G Rbm34 RNA binding motif protein 34 decreases expression ISO Colchicine results in decreased expression of RBM34 mRNA CTD PMID:24211769 NCBI chr19:59,874,745...59,894,981
Ensembl chr19:59,874,752...59,894,937
JBrowse link
G Rfc1 replication factor C subunit 1 decreases expression ISO Colchicine results in decreased expression of RFC1 mRNA CTD PMID:24211769 NCBI chr14:44,627,528...44,702,205
Ensembl chr14:44,580,216...44,702,203
JBrowse link
G Rgs16 regulator of G-protein signaling 16 decreases expression ISO Colchicine results in decreased expression of RGS16 mRNA CTD PMID:24211769 NCBI chr13:71,163,411...71,185,147
Ensembl chr13:71,179,910...71,185,216
JBrowse link
G Rnf113a1 ring finger protein 113A1 decreases expression ISO Colchicine results in decreased expression of RNF113A mRNA CTD PMID:24211769 NCBI chr  X:123,806,922...123,808,049
Ensembl chr  X:124,516,949...124,518,077
JBrowse link
G Rnf19b ring finger protein 19B decreases expression ISO Colchicine results in decreased expression of RNF19B mRNA CTD PMID:24211769 NCBI chr 5:147,246,032...147,270,892
Ensembl chr 5:147,246,037...147,270,957
JBrowse link
G S100a8 S100 calcium binding protein A8 increases expression EXP Colchicine results in increased expression of S100A8 mRNA CTD PMID:20624997 NCBI chr 2:190,073,239...190,074,333
Ensembl chr 2:190,073,815...190,074,354
JBrowse link
G S100a9 S100 calcium binding protein A9 increases expression EXP Colchicine results in increased expression of S100A9 mRNA CTD PMID:20624997 NCBI chr 2:190,097,436...190,100,209
Ensembl chr 2:190,097,554...190,100,276
JBrowse link
G Sac3d1 SAC3 domain containing 1 decreases expression ISO Colchicine results in decreased expression of SAC3D1 mRNA CTD PMID:24211769 NCBI chr 1:221,484,210...221,486,669
Ensembl chr 1:221,484,316...221,486,633
JBrowse link
G Sct secretin multiple interactions EXP Colchicine inhibits the reaction [SCT results in increased susceptibility to Ursodeoxycholic Acid analog]; Colchicine inhibits the reaction [SCT results in increased susceptibility to Ursodeoxycholic Acid]; Colchicine inhibits the reaction [Ursodeoxycholic Acid analog results in increased activity of SCT] CTD PMID:22194894 NCBI chr 1:214,264,865...214,277,437
Ensembl chr 1:214,264,754...214,265,668
JBrowse link
G Sdc1 syndecan 1 decreases expression ISO Colchicine results in decreased expression of SDC1 mRNA CTD PMID:24211769 NCBI chr 6:33,885,576...33,908,038
Ensembl chr 6:33,885,495...33,908,016
JBrowse link
G Sdhaf1 succinate dehydrogenase complex assembly factor 1 decreases expression ISO Colchicine results in decreased expression of SDHAF1 mRNA CTD PMID:24211769 NCBI chr 1:88,779,476...88,780,425
Ensembl chr 1:90,948,976...90,949,332
JBrowse link
G Sele selectin E increases expression EXP Colchicine results in increased expression of SELE mRNA CTD PMID:20624997 NCBI chr13:82,355,234...82,365,323
Ensembl chr13:82,355,471...82,365,341
JBrowse link
G Serpina6 serpin family A member 6 decreases transport EXP Colchicine results in decreased transport of SERPINA6 protein CTD PMID:16700006 NCBI chr 6:127,523,948...127,534,178
Ensembl chr 6:127,523,906...127,534,247
JBrowse link
G Serpine1 serpin family E member 1 increases expression EXP Colchicine results in increased expression of SERPINE1 mRNA CTD PMID:20624997 NCBI chr12:22,641,104...22,651,482
Ensembl chr12:22,641,104...22,651,482
JBrowse link
G Sesn1 sestrin 1 increases expression
decreases expression
EXP
ISO
Colchicine results in increased expression of SESN1 mRNA
Colchicine results in decreased expression of SESN1 mRNA
CTD PMID:20624997 PMID:24211769 NCBI chr20:46,667,116...46,758,306
Ensembl chr20:46,667,121...46,758,305
JBrowse link
G Sgk1 serum/glucocorticoid regulated kinase 1 decreases expression ISO Colchicine results in decreased expression of SGK1 mRNA CTD PMID:24211769 NCBI chr 1:24,185,451...24,302,309
Ensembl chr 1:24,185,435...24,302,298
JBrowse link
G Slbp stem-loop binding protein decreases expression ISO Colchicine results in decreased expression of SLBP mRNA CTD PMID:24211769 NCBI chr14:82,356,916...82,366,368
Ensembl chr14:82,356,916...82,366,368
JBrowse link
G Slc1a5 solute carrier family 1 member 5 decreases expression ISO Colchicine results in decreased expression of SLC1A5 mRNA CTD PMID:24211769 NCBI chr 1:78,710,686...78,724,789
Ensembl chr 1:78,710,539...78,724,794
JBrowse link
G Spon1 spondin 1 increases expression EXP Colchicine results in increased expression of SPON1 mRNA CTD PMID:20624997 NCBI chr 1:178,568,777...178,935,715
Ensembl chr 1:178,636,544...178,935,051
JBrowse link
G Sptan1 spectrin, alpha, non-erythrocytic 1 multiple interactions
increases cleavage
ISO 3,9-bis((ethylthio)methyl)-K-252a inhibits the reaction [Colchicine results in increased cleavage of SPTAN1 protein] CTD PMID:16478524 NCBI chr 3:8,534,437...8,599,259
Ensembl chr 3:8,534,440...8,599,260
JBrowse link
G Srxn1 sulfiredoxin 1 increases expression ISO Colchicine results in increased expression of SRXN1 protein CTD PMID:27358234 NCBI chr 3:147,608,850...147,614,410
Ensembl chr 3:147,609,095...147,632,801
JBrowse link
G Stat1 signal transducer and activator of transcription 1 multiple interactions ISO Colchicine deficiency results in decreased activity of and affects the localization of STAT1 protein CTD PMID:28086195 NCBI chr 9:54,287,540...54,327,958
Ensembl chr 9:54,287,541...54,484,533
JBrowse link
G Tat tyrosine aminotransferase multiple interactions
decreases expression
ISO pyrazolanthrone inhibits the reaction [Colchicine results in decreased expression of TAT mRNA] CTD PMID:15744361 NCBI chr19:41,675,639...41,686,195
Ensembl chr19:41,675,355...41,686,229
JBrowse link
G Tbc1d4 TBC1 domain family, member 4 multiple interactions
affects phosphorylation
EXP Colchicine inhibits the reaction [Oligomycins results in increased phosphorylation of TBC1D4 protein]
Colchicine affects the phosphorylation of TBC1D4 protein
CTD PMID:18063688 NCBI chr15:85,927,978...86,105,829
Ensembl chr15:85,930,044...86,105,273
JBrowse link
G Tfpi2 tissue factor pathway inhibitor 2 increases expression EXP Colchicine results in increased expression of TFPI2 mRNA CTD PMID:20624997 NCBI chr 4:28,947,951...28,953,261
Ensembl chr 4:28,947,965...28,953,067
JBrowse link
G Tgfb1 transforming growth factor, beta 1 multiple interactions EXP Colchicine inhibits the reaction [Carbon Tetrachloride results in increased expression of TGFB1 protein]; Colchicine inhibits the reaction [Dimethylnitrosamine results in increased expression of TGFB1 protein]; Colchicine inhibits the reaction [Ethanol results in increased expression of TGFB1 protein] CTD PMID:14726149 PMID:22446813 PMID:23146695 NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
JBrowse link
G Thbd thrombomodulin increases expression EXP Colchicine results in increased expression of THBD mRNA CTD PMID:20624997 NCBI chr 3:142,748,673...142,752,325
Ensembl chr 3:142,748,674...142,752,325
JBrowse link
G Thbs1 thrombospondin 1 increases expression EXP Colchicine results in increased expression of THBS1 mRNA CTD PMID:20624997 NCBI chr 3:109,862,120...109,873,466
Ensembl chr 3:109,862,117...109,873,466
JBrowse link
G Thra thyroid hormone receptor alpha multiple interactions ISO Colchicine binds to and results in decreased activity of THRA protein CTD PMID:25752796 NCBI chr10:86,657,285...86,684,935
Ensembl chr10:86,657,285...86,684,933
JBrowse link
G Thrb thyroid hormone receptor beta multiple interactions ISO Colchicine binds to and results in decreased activity of THRB protein CTD PMID:25752796 NCBI chr15:8,890,578...9,239,815
Ensembl chr15:8,890,578...9,086,282
JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase decreases expression ISO Colchicine results in decreased expression of TIGAR mRNA CTD PMID:24211769 NCBI chr 4:159,635,145...159,654,108
Ensembl chr 4:159,635,153...159,654,063
JBrowse link
G Timp1 TIMP metallopeptidase inhibitor 1 increases expression EXP Colchicine results in increased expression of TIMP1 mRNA CTD PMID:20624997 NCBI chr  X:1,364,771...1,369,451
Ensembl chr  X:1,364,786...1,369,384
JBrowse link
G Tipin timeless interacting protein decreases expression ISO Colchicine results in decreased expression of TIPIN mRNA CTD PMID:24211769 NCBI chr 8:69,753,363...69,768,640
Ensembl chr 8:69,753,373...69,768,305
JBrowse link
G Tmem185b transmembrane protein 185B decreases expression ISO Colchicine results in decreased expression of TMEM185B mRNA CTD PMID:24211769 NCBI chr13:35,554,621...35,557,952
Ensembl chr13:35,554,964...35,556,016
JBrowse link
G Tnf tumor necrosis factor decreases expression
multiple interactions
ISO
EXP
Colchicine results in decreased expression of TNF protein
Colchicine inhibits the reaction [TNF protein results in increased expression of VCAM1 protein]; Paclitaxel inhibits the reaction [Colchicine inhibits the reaction [TNF protein results in increased expression of VCAM1 mRNA]]; Paclitaxel inhibits the reaction [Colchicine inhibits the reaction [TNF protein results in increased expression of VCAM1 protein]]
Colchicine inhibits the reaction [Carbon Tetrachloride results in increased expression of TNF protein]; Colchicine inhibits the reaction [Ethanol results in increased expression of TNF protein]
CTD PMID:1553933 PMID:11154858 PMID:22446813 PMID:23146695 NCBI chr20:5,189,382...5,192,000
Ensembl chr20:5,189,390...5,192,000
JBrowse link
G Tnfrsf1a TNF receptor superfamily member 1A affects response to substance ISO TNFRSF1A protein affects the susceptibility to Colchicine CTD PMID:20159942 NCBI chr 4:157,864,905...157,877,634
Ensembl chr 4:157,864,969...157,877,633
JBrowse link
G Tnfsf9 TNF superfamily member 9 decreases expression ISO Colchicine results in decreased expression of TNFSF9 mRNA CTD PMID:24211769 NCBI chr 9:9,909,942...9,912,276
Ensembl chr 9:9,909,948...9,912,276
JBrowse link
G Tnni3 troponin I3, cardiac type increases expression EXP Colchicine results in increased expression of TNNI3 protein CTD PMID:20624997 NCBI chr 1:72,882,806...72,886,490
Ensembl chr 1:72,882,806...72,886,488
JBrowse link
G Top3a DNA topoisomerase III alpha decreases expression ISO Colchicine results in decreased expression of TOP3A mRNA CTD PMID:24211769 NCBI chr10:46,980,646...47,018,728
Ensembl chr10:46,981,958...47,018,537
JBrowse link
G Tor1a torsin family 1, member A decreases expression ISO Colchicine results in decreased expression of TOR1A mRNA CTD PMID:24211769 NCBI chr 3:9,800,322...9,807,318
Ensembl chr 3:9,800,322...9,807,328
JBrowse link
G Tp53 tumor protein p53 multiple interactions ISO TP53 protein affects the reaction [Colchicine results in increased phosphorylation of JUN protein]; TP53 protein affects the reaction [Colchicine results in increased phosphorylation of MAPK8 protein]; TP53 protein affects the reaction [Colchicine results in increased phosphorylation of MAPK9 protein] CTD PMID:12221076 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
G Tpd52l1 TPD52 like 1 increases expression EXP Colchicine results in increased expression of TPD52L1 mRNA CTD PMID:20624997 NCBI chr 1:28,454,949...28,578,736
Ensembl chr 1:28,454,966...28,576,553
JBrowse link
G Traf2 Tnf receptor-associated factor 2 affects response to substance ISO TRAF2 protein affects the susceptibility to Colchicine CTD PMID:20159942 NCBI chr 3:2,746,061...2,770,690
Ensembl chr 3:2,746,075...2,770,620
JBrowse link
G Triap1 TP53 regulated inhibitor of apoptosis 1 decreases expression ISO Colchicine results in decreased expression of TRIAP1 mRNA CTD PMID:24211769 NCBI chr12:46,987,404...46,989,906
Ensembl chr12:46,987,404...46,989,897
Ensembl chr12:46,987,404...46,989,897
JBrowse link
G Trim26 tripartite motif-containing 26 decreases expression ISO Colchicine results in decreased expression of TRIM26 mRNA CTD PMID:24211769 NCBI chr20:2,201,685...2,224,481
Ensembl chr20:2,201,683...2,224,463
JBrowse link
G Trim32 tripartite motif-containing 32 decreases expression ISO Colchicine results in decreased expression of TRIM32 mRNA CTD PMID:24211769 NCBI chr 5:81,431,554...81,449,023
Ensembl chr 5:81,431,600...81,442,451
JBrowse link
G Trim38 tripartite motif containing 38 decreases expression ISO Colchicine results in decreased expression of TRIM38 mRNA CTD PMID:24211769 NCBI chr17:43,600,006...43,607,879 JBrowse link
G Tuba1b tubulin, alpha 1B decreases expression EXP Colchicine results in decreased expression of TUBA1B mRNA CTD PMID:20624997 NCBI chr 7:140,614,746...140,617,721
Ensembl chr 7:140,614,752...140,617,721
JBrowse link
G Tuba4a tubulin, alpha 4A decreases expression EXP Colchicine results in decreased expression of TUBA4A mRNA CTD PMID:20624997 NCBI chr 9:82,415,599...82,419,918
Ensembl chr 9:82,415,605...82,419,288
JBrowse link
G Tubb4b tubulin, beta 4B class IVb decreases expression EXP Colchicine results in decreased expression of TUBB4B mRNA CTD PMID:20624997 NCBI chr 3:2,441,585...2,444,369
Ensembl chr 3:2,441,733...2,444,281
JBrowse link
G Tubb5 tubulin, beta 5 class I decreases expression EXP Colchicine results in decreased expression of TUBB5 mRNA CTD PMID:20624997 NCBI chr20:3,422,448...3,426,420
Ensembl chr20:3,422,461...3,426,371
JBrowse link
G Tubg1 tubulin, gamma 1 decreases expression EXP Colchicine results in decreased expression of TUBG1 mRNA CTD PMID:20624997 NCBI chr10:89,030,865...89,037,455
Ensembl chr10:89,030,865...89,037,455
JBrowse link
G Utp3 UTP3, small subunit processome component decreases expression ISO Colchicine results in decreased expression of UTP3 mRNA CTD PMID:24211769 NCBI chr14:21,153,998...21,155,652
Ensembl chr14:21,154,000...21,155,652
JBrowse link
G Vcam1 vascular cell adhesion molecule 1 increases expression
multiple interactions
EXP
ISO
Colchicine results in increased expression of VCAM1 mRNA
Colchicine inhibits the reaction [IL1A protein results in increased expression of VCAM1 protein]; Colchicine inhibits the reaction [TNF protein results in increased expression of VCAM1 protein]; Paclitaxel inhibits the reaction [Colchicine inhibits the reaction [TNF protein results in increased expression of VCAM1 mRNA]]; Paclitaxel inhibits the reaction [Colchicine inhibits the reaction [TNF protein results in increased expression of VCAM1 protein]]
CTD PMID:11154858 PMID:20624997 NCBI chr 2:219,071,193...219,090,931
Ensembl chr 2:219,071,193...219,097,619
JBrowse link
G Vip vasoactive intestinal peptide increases expression EXP Colchicine results in increased expression of VIP mRNA; Colchicine results in increased expression of VIP protein CTD PMID:1850078 PMID:8837219 NCBI chr 1:42,169,307...42,177,582
Ensembl chr 1:42,169,501...42,177,582
JBrowse link
G Xpc XPC complex subunit, DNA damage recognition and repair factor decreases expression ISO Colchicine results in decreased expression of XPC mRNA CTD PMID:24211769 NCBI chr 4:123,134,457...123,161,985
Ensembl chr 4:123,134,457...123,161,985
JBrowse link
G Zbtb24 zinc finger and BTB domain containing 24 decreases expression ISO Colchicine results in decreased expression of ZBTB24 mRNA CTD PMID:24211769 NCBI chr20:46,168,149...46,189,806
Ensembl chr20:46,168,177...46,189,806
JBrowse link
G Zfp202 zinc finger protein 202 decreases expression ISO Colchicine results in decreased expression of ZNF202 mRNA CTD PMID:24211769 NCBI chr 8:44,047,586...44,068,990
Ensembl chr 8:44,047,592...44,068,003
JBrowse link
G Zfp36l1 zinc finger protein 36, C3H type-like 1 decreases expression ISO Colchicine results in decreased expression of ZFP36L1 mRNA CTD PMID:24211769 NCBI chr 6:103,308,032...103,313,074
Ensembl chr 6:103,308,045...103,313,074
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19841
    role 19792
      application 19465
        anti-inflammatory agent 14973
          (S)-colchicine 214
Path 2
Term Annotations click to browse term
  CHEBI ontology 19841
    subatomic particle 19839
      composite particle 19839
        hadron 19839
          baryon 19839
            nucleon 19839
              atomic nucleus 19839
                atom 19839
                  main group element atom 19732
                    p-block element atom 19732
                      carbon group element atom 19636
                        carbon atom 19625
                          organic molecular entity 19625
                            organic group 18537
                              organic divalent group 18528
                                organodiyl group 18528
                                  carbonyl group 18436
                                    carbonyl compound 18436
                                      carboxylic acid 18113
                                        carboacyl group 17377
                                          univalent carboacyl group 17377
                                            carbamoyl group 17164
                                              carboxamide 17164
                                                acetamides 12401
                                                  colchicine 214
                                                    (S)-colchicine 214
paths to the root