Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:cyanidin cation
go back to main search page
Accession:CHEBI:27843 term browser browse the term
Definition:An anthocyanidin cation that is flavylium substituted at positions 3, 3', 4', 5 and 7 by hydroxy groups.
Synonyms:exact_synonym: 2-(3,4-dihydroxyphenyl)-3,5,7-trihydroxychromenium
 related_synonym: 2-(3,4-Dihydroxyphenyl)-3,5,7-trihydroxy-1-Benzopyrylium;   2-(3,4-dihydroxyphenyl)-3,5,7-trihydroxychromenylium;   3,5,7,3',4'-Pentahydroxyflavylium;   Cyanidin;   Cyanidine;   Cyanidol;   Formula=C15H11O6;   InChI=1S/C15H10O6/c16-8-4-11(18)9-6-13(20)15(21-14(9)5-8)7-1-2-10(17)12(19)3-7/h1-6H,(H4-,16,17,18,19,20)/p+1;   InChIKey=VEVZSMAEJFVWIL-UHFFFAOYSA-O;   SMILES=Oc1cc(O)c2cc(O)c([o+]c2c1)-c1ccc(O)c(O)c1
 alt_id: CHEBI:23425;   CHEBI:3970
 xref: Beilstein:1690254;   CAS:13306-05-3;   KEGG:C05905;   KNApSAcK:C00006614;   LIPID_MAPS_instance:LMPK12010002
 xref_mesh: MESH:C017154
 xref: MetaCyc:CPD-591;   PMID:23123597;   PMID:23360684;   PMID:23375153;   PMID:23389674;   Reaxys:1690254;   Wikipedia:Cyanidin
 cyclic_relationship: is_conjugate_acid_of CHEBI:71682



show annotations for term's descendants           Sort by:
 
cyanidin cation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahr aryl hydrocarbon receptor increases activity ISO cyanidin results in increased activity of AHR protein CTD PMID:23419638 NCBI chr 6:52,234,089...52,271,568
Ensembl chr 6:52,234,089...52,271,568
JBrowse link
G Ccn1 cellular communication network factor 1 multiple interactions ISO
EXP
cyanidin inhibits the reaction [[IL17A protein co-treated with Freund's Adjuvant] results in increased expression of CCN1 protein]
cyanidin inhibits the reaction [Freund's Adjuvant results in increased expression of CCN1 protein]
CTD PMID:32044269 NCBI chr 2:234,562,410...234,565,370
Ensembl chr 2:234,562,408...234,565,484
JBrowse link
G Csf2 colony stimulating factor 2 multiple interactions EXP
ISO
cyanidin inhibits the reaction [Freund's Adjuvant results in increased expression of CSF2 protein]
cyanidin inhibits the reaction [[IL17A protein co-treated with Freund's Adjuvant] results in increased expression of CSF2 mRNA]; cyanidin inhibits the reaction [[IL17A protein co-treated with Freund's Adjuvant] results in increased expression of CSF2 protein]
CTD PMID:32044269 NCBI chr10:38,386,945...38,388,926
Ensembl chr10:38,386,945...38,389,199
JBrowse link
G Hbegf heparin-binding EGF-like growth factor multiple interactions ISO cyanidin inhibits the reaction [Sodium Chloride results in increased expression of HBEGF mRNA] CTD PMID:26800359 NCBI chr18:28,106,284...28,116,167
Ensembl chr18:28,105,760...28,116,441
JBrowse link
G Hlcs holocarboxylase synthetase decreases activity ISO cyanidin results in decreased activity of HLCS protein CTD PMID:26303405 NCBI chr11:33,455,806...33,635,197
Ensembl chr11:33,455,809...33,624,222
JBrowse link
G Hmox1 heme oxygenase 1 affects expression ISO cyanidin affects the expression of HMOX1 protein CTD PMID:26505893 NCBI chr19:13,466,287...13,474,082
Ensembl chr19:13,467,244...13,474,079
JBrowse link
G Il17a interleukin 17A multiple interactions ISO [cyanidin inhibits the reaction [[IL17A protein co-treated with Freund's Adjuvant] results in increased expression of and results in increased phosphorylation of STAT3 protein]] which results in increased expression of PIAS3 protein; cyanidin inhibits the reaction [[IL17A protein co-treated with Freund's Adjuvant] results in increased expression of and results in increased phosphorylation of STAT3 protein]; cyanidin inhibits the reaction [[IL17A protein co-treated with Freund's Adjuvant] results in increased expression of CCN1 protein]; cyanidin inhibits the reaction [[IL17A protein co-treated with Freund's Adjuvant] results in increased expression of CSF2 mRNA]; cyanidin inhibits the reaction [[IL17A protein co-treated with Freund's Adjuvant] results in increased expression of CSF2 protein]; cyanidin inhibits the reaction [[IL17A protein co-treated with Freund's Adjuvant] results in increased expression of IL17RA mRNA]; cyanidin inhibits the reaction [[IL17A protein co-treated with Freund's Adjuvant] results in increased expression of IL17RA protein]; cyanidin inhibits the reaction [[IL17A protein co-treated with Freund's Adjuvant] results in increased expression of IL23A mRNA]; cyanidin inhibits the reaction [[IL17A protein co-treated with Freund's Adjuvant] results in increased expression of IL23A protein]; cyanidin inhibits the reaction [[IL17A protein co-treated with Freund's Adjuvant] results in increased expression of PCNA protein]; cyanidin inhibits the reaction [[IL17A protein co-treated with Freund's Adjuvant] results in increased expression of TLR3 protein]; cyanidin inhibits the reaction [[IL17A protein co-treated with Freund's Adjuvant] results in increased phosphorylation of JAK1 protein]; cyanidin inhibits the reaction [[IL17A protein co-treated with Freund's Adjuvant] results in increased phosphorylation of JAK3 protein]; cyanidin inhibits the reaction [IL17A protein promotes the reaction [Freund's Adjuvant results in increased expression of TLR3 protein]] CTD PMID:32044269 NCBI chr 9:23,144,402...23,147,889
Ensembl chr 9:23,144,402...23,147,889
JBrowse link
G Il17ra interleukin 17 receptor A multiple interactions ISO cyanidin inhibits the reaction [[IL17A protein co-treated with Freund's Adjuvant] results in increased expression of IL17RA mRNA]; cyanidin inhibits the reaction [[IL17A protein co-treated with Freund's Adjuvant] results in increased expression of IL17RA protein] CTD PMID:32044269 NCBI chr 4:153,667,534...153,690,174
Ensembl chr 4:153,667,534...153,690,174
JBrowse link
G Il23a interleukin 23 subunit alpha multiple interactions ISO
EXP
cyanidin inhibits the reaction [[IL17A protein co-treated with Freund's Adjuvant] results in increased expression of IL23A mRNA]; cyanidin inhibits the reaction [[IL17A protein co-treated with Freund's Adjuvant] results in increased expression of IL23A protein]
cyanidin inhibits the reaction [Freund's Adjuvant results in increased expression of IL23A protein]
CTD PMID:32044269 NCBI chr 7:721,809...723,923
Ensembl chr 7:721,809...723,923
JBrowse link
G Jak1 Janus kinase 1 multiple interactions ISO cyanidin inhibits the reaction [[IL17A protein co-treated with Freund's Adjuvant] results in increased phosphorylation of JAK1 protein] CTD PMID:32044269 NCBI chr 5:115,780,248...115,888,841
Ensembl chr 5:115,780,248...115,888,926
JBrowse link
G Jak3 Janus kinase 3 multiple interactions ISO cyanidin inhibits the reaction [[IL17A protein co-treated with Freund's Adjuvant] results in increased phosphorylation of JAK3 protein] CTD PMID:32044269 NCBI chr16:18,386,330...18,398,542
Ensembl chr16:18,386,405...18,398,536
JBrowse link
G Nfe2l2 NFE2 like bZIP transcription factor 2 increases activity
affects expression
EXP
ISO
cyanidin results in increased activity of NFE2L2 protein
cyanidin affects the expression of NFE2L2 protein
CTD PMID:26505893 PMID:27166148 NCBI chr 3:60,594,239...60,621,785
Ensembl chr 3:60,594,242...60,621,737
JBrowse link
G Nos3 nitric oxide synthase 3 increases expression ISO cyanidin results in increased expression of NOS3 mRNA CTD PMID:15740983 NCBI chr 4:10,793,834...10,814,170
Ensembl chr 4:10,793,834...10,814,166
JBrowse link
G Pcna proliferating cell nuclear antigen multiple interactions ISO cyanidin inhibits the reaction [[IL17A protein co-treated with Freund's Adjuvant] results in increased expression of PCNA protein] CTD PMID:32044269 NCBI chr 3:119,499,039...119,502,911
Ensembl chr 3:119,498,810...119,502,995
JBrowse link
G Pdgfa platelet derived growth factor subunit A multiple interactions ISO cyanidin inhibits the reaction [[PDGFA protein co-treated with PDGFB protein] results in increased abundance of Reactive Oxygen Species]; cyanidin inhibits the reaction [[PDGFA protein co-treated with PDGFB protein] results in increased secretion of VEGFA protein] CTD PMID:16921400 NCBI chr12:15,645,549...15,667,056
Ensembl chr12:15,645,541...15,666,497
JBrowse link
G Pdgfb platelet derived growth factor subunit B multiple interactions ISO cyanidin inhibits the reaction [[PDGFA protein co-treated with PDGFB protein] results in increased abundance of Reactive Oxygen Species]; cyanidin inhibits the reaction [[PDGFA protein co-treated with PDGFB protein] results in increased secretion of VEGFA protein] CTD PMID:16921400 NCBI chr 7:111,539,444...111,557,984
Ensembl chr 7:111,540,345...111,557,984
JBrowse link
G Pias3 protein inhibitor of activated STAT, 3 multiple interactions ISO [cyanidin inhibits the reaction [[IL17A protein co-treated with Freund's Adjuvant] results in increased expression of and results in increased phosphorylation of STAT3 protein]] which results in increased expression of PIAS3 protein CTD PMID:32044269 NCBI chr 2:184,232,546...184,241,455
Ensembl chr 2:184,232,571...184,241,480
JBrowse link
G Stat3 signal transducer and activator of transcription 3 multiple interactions ISO
EXP
[cyanidin inhibits the reaction [[IL17A protein co-treated with Freund's Adjuvant] results in increased expression of and results in increased phosphorylation of STAT3 protein]] which results in increased expression of PIAS3 protein; cyanidin inhibits the reaction [[IL17A protein co-treated with Freund's Adjuvant] results in increased expression of and results in increased phosphorylation of STAT3 protein]
cyanidin inhibits the reaction [Freund's Adjuvant results in increased phosphorylation of STAT3 protein]
CTD PMID:32044269 NCBI chr10:85,811,206...85,863,057
Ensembl chr10:85,811,218...85,863,057
JBrowse link
G Tlr3 toll-like receptor 3 multiple interactions ISO
EXP
cyanidin inhibits the reaction [[IL17A protein co-treated with Freund's Adjuvant] results in increased expression of TLR3 protein]; cyanidin inhibits the reaction [IL17A protein promotes the reaction [Freund's Adjuvant results in increased expression of TLR3 protein]]
cyanidin inhibits the reaction [Freund's Adjuvant results in increased expression of TLR3 protein]
CTD PMID:32044269 NCBI chr16:46,821,980...46,837,900
Ensembl chr16:46,822,039...46,836,545
JBrowse link
G Tnf tumor necrosis factor multiple interactions ISO cyanidin inhibits the reaction [Benzo(a)pyrene results in increased expression of TNF mRNA] CTD PMID:28533128 NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
JBrowse link
G Ucp2 uncoupling protein 2 multiple interactions ISO cyanidin inhibits the reaction [Benzo(a)pyrene results in increased expression of UCP2 mRNA] CTD PMID:28533128 NCBI chr 1:154,839,242...154,845,612
Ensembl chr 1:154,839,209...154,845,611
JBrowse link
G Vegfa vascular endothelial growth factor A multiple interactions ISO cyanidin inhibits the reaction [[PDGFA protein co-treated with PDGFB protein] results in increased secretion of VEGFA protein]; cyanidin inhibits the reaction [cobaltous chloride results in increased expression of VEGFA mRNA] CTD PMID:16921400 PMID:26800359 NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19795
    role 19746
      chemical role 19316
        antioxidant 14437
          cyanidin cation 22
            6-hydroxycyanidin 0
            cyanidin 3,3',5-tri-O-glucoside 0
            cyanidin 3,7-di-O-beta-D-glucoside 0
            cyanidin 3,7-di-O-beta-D-glucoside betaine 0
            cyanidin 3-O-(2''-O-galloyl-beta-D-galactopyranoside) 0
            cyanidin 3-O-(2-O-beta-D-glucuronosyl)-beta-D-glucoside 0
            cyanidin 3-O-(2-O-beta-D-glucuronosyl)-beta-D-glucoside betaine 0
            cyanidin 3-O-(2-O-beta-D-glucuronosyl)-beta-D-glucoside(2-) 0
            cyanidin 3-O-(6-O-(E)-4-coumaroyl-beta-D-glucoside) 0
            cyanidin 3-O-(6-O-acetyl-beta-D-glucoside) 0
            cyanidin 3-O-(6-O-glucosyl-2-O-xylosylgalactoside) 0
            cyanidin 3-O-(6-O-malonyl-beta-D-glucoside) 0
            cyanidin 3-O-[6-O-(4-O-beta-D-glucosyl-p-coumaroyl)-2-O-(2-O-sinapoyl-beta-D-xylosyl)-beta-D-glucosyl]-5-O-(6-O-malonyl-beta-D-glucoside) 0
            cyanidin 3-O-[6-O-(4-O-beta-D-glucosyl-p-coumaroyl)-2-O-(beta-D-xylosyl)-beta-D-glucosyl]-5-O-(6-O-malonyl-beta-D-glucoside) 0
            cyanidin 3-O-[beta-D-xylosyl-(1->2)-beta-D-galactoside] 0
            cyanidin 3-O-[beta-D-xylosyl-(1->2)-beta-D-galactoside](1-) 0
            cyanidin 3-O-\ 0
            cyanidin 3-O-\ 0
            cyanidin 3-O-beta-D-galactoside + 0
            cyanidin 3-O-beta-D-galactoside betaine 0
            cyanidin 3-O-beta-D-glucoside 0
            cyanidin 3-O-beta-D-glucoside(1-) 0
            cyanidin 3-O-beta-D-sambubioside 0
            cyanidin 3-O-rutinoside + 0
            cyanidin 3-O-rutinoside 5-O-beta-D-glucoside 0
            cyanin + 0
            cyanin betaine 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19795
    subatomic particle 19794
      composite particle 19794
        hadron 19794
          baryon 19794
            nucleon 19794
              atomic nucleus 19794
                atom 19794
                  main group element atom 19693
                    p-block element atom 19693
                      carbon group element atom 19614
                        carbon atom 19604
                          organic molecular entity 19604
                            organic molecule 19545
                              organic cyclic compound 19339
                                organic heterocyclic compound 18579
                                  oxacycle 17602
                                    benzopyran 11160
                                      1-benzopyran 10901
                                        chromenes 3027
                                          chromene 136
                                            2H-chromene 136
                                              chromenyliums 136
                                                chromenylium 136
                                                  flavylium 136
                                                    anthocyanidin cation 136
                                                      5-hydroxyanthocyanidin 87
                                                        cyanidin cation 22
                                                          6-hydroxycyanidin 0
                                                          cyanidin 3,3',5-tri-O-glucoside 0
                                                          cyanidin 3,7-di-O-beta-D-glucoside 0
                                                          cyanidin 3,7-di-O-beta-D-glucoside betaine 0
                                                          cyanidin 3-O-(2''-O-galloyl-beta-D-galactopyranoside) 0
                                                          cyanidin 3-O-(2-O-beta-D-glucuronosyl)-beta-D-glucoside 0
                                                          cyanidin 3-O-(2-O-beta-D-glucuronosyl)-beta-D-glucoside betaine 0
                                                          cyanidin 3-O-(2-O-beta-D-glucuronosyl)-beta-D-glucoside(2-) 0
                                                          cyanidin 3-O-(6-O-(E)-4-coumaroyl-beta-D-glucoside) 0
                                                          cyanidin 3-O-(6-O-acetyl-beta-D-glucoside) 0
                                                          cyanidin 3-O-(6-O-glucosyl-2-O-xylosylgalactoside) 0
                                                          cyanidin 3-O-(6-O-malonyl-beta-D-glucoside) 0
                                                          cyanidin 3-O-[6-O-(4-O-beta-D-glucosyl-p-coumaroyl)-2-O-(2-O-sinapoyl-beta-D-xylosyl)-beta-D-glucosyl]-5-O-(6-O-malonyl-beta-D-glucoside) 0
                                                          cyanidin 3-O-[6-O-(4-O-beta-D-glucosyl-p-coumaroyl)-2-O-(beta-D-xylosyl)-beta-D-glucosyl]-5-O-(6-O-malonyl-beta-D-glucoside) 0
                                                          cyanidin 3-O-[beta-D-xylosyl-(1->2)-beta-D-galactoside] 0
                                                          cyanidin 3-O-[beta-D-xylosyl-(1->2)-beta-D-galactoside](1-) 0
                                                          cyanidin 3-O-\ 0
                                                          cyanidin 3-O-\ 0
                                                          cyanidin 3-O-beta-D-galactoside + 0
                                                          cyanidin 3-O-beta-D-galactoside betaine 0
                                                          cyanidin 3-O-beta-D-glucoside 0
                                                          cyanidin 3-O-beta-D-glucoside(1-) 0
                                                          cyanidin 3-O-beta-D-sambubioside 0
                                                          cyanidin 3-O-rutinoside + 0
                                                          cyanidin 3-O-rutinoside 5-O-beta-D-glucoside 0
                                                          cyanin + 0
                                                          cyanin betaine 0
paths to the root