Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   


Term:(5-hydroxyindol-3-yl)acetic acid
go back to main search page
Accession:CHEBI:27823 term browser browse the term
Definition:A member of the class of indole-3-acetic acids that is indole-3-acetic acid substituted by a hydroxy group at C-5.
Synonyms:exact_synonym: (5-hydroxy-1H-indol-3-yl)acetic acid
 related_synonym: 5-HIAA;   5-Hydroxy-1H-indole-3-acetic acid;   5-Hydroxyindol-3-ylacetic acid;   5-Hydroxyindole-3-acetic acid;   5-Hydroxyindoleacetic acid;   Formula=C10H9NO3;   InChI=1S/C10H9NO3/c12-7-1-2-9-8(4-7)6(5-11-9)3-10(13)14/h1-2,4-5,11-12H,3H2,(H,13,14);   InChIKey=DUUGKQCEGZLZNO-UHFFFAOYSA-N;   SMILES=OC(=O)Cc1c[nH]c2ccc(O)cc12
 alt_id: CHEBI:20585;   CHEBI:2071
 xref: Beilstein:168797 "Beilstein";   CAS:54-16-0 "ChemIDplus";   HMDB:HMDB0000763;   KEGG:C05635;   KNApSAcK:C00000104
 xref_mesh: MESH:D006897
 xref: MetaCyc:5-HYDROXYINDOLE_ACETATE;   PMID:11063613 "Europe PMC";   PMID:11113939 "Europe PMC";   PMID:22770225 "Europe PMC";   Reaxys:168797 "Reaxys";   Wikipedia:5-Hydroxyindoleacetic_acid
 cyclic_relationship: is_conjugate_acid_of CHEBI:62622

show annotations for term's descendants       view all columns           Sort by:
(5-hydroxyindol-3-yl)acetic acid term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adrb2 adrenoceptor beta 2 JBrowse link 18 57,513,792 57,515,834 RGD:6480464
G Otc ornithine carbamoyltransferase JBrowse link X 13,524,804 13,601,074 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19679
    role 19623
      application 19246
        food additive 14223
          food acidity regulator 11489
            acetic acid 10587
              indole-3-acetic acids 3169
                (5-hydroxyindol-3-yl)acetic acid 2
Path 2
Term Annotations click to browse term
  CHEBI ontology 19679
    subatomic particle 19675
      composite particle 19675
        hadron 19675
          baryon 19675
            nucleon 19675
              atomic nucleus 19675
                atom 19675
                  main group element atom 19555
                    p-block element atom 19555
                      carbon group element atom 19438
                        carbon atom 19430
                          organic molecular entity 19430
                            organic molecule 19353
                              organic cyclic compound 19102
                                organic heterocyclic compound 18170
                                  organic heteropolycyclic compound 17432
                                    organic heterobicyclic compound 15906
                                      benzopyrrole 5754
                                        indoles 5530
                                          indolyl carboxylic acid 3171
                                            indol-3-yl carboxylic acid 3170
                                              indole-3-acetic acids 3169
                                                (5-hydroxyindol-3-yl)acetic acid 2
paths to the root


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.