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ONTOLOGY REPORT - ANNOTATIONS


Term:selenomethionine
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Accession:CHEBI:27585 term browser browse the term
Definition:A selenoamino acid that is the selenium analogue of methionine.
Synonyms:related_synonym: 2-amino-4-methylseleno-butanoic acid;   Formula=C5H11NO2Se;   InChI=1S/C5H11NO2Se/c1-9-3-2-4(6)5(7)8/h4H,2-3,6H2,1H3,(H,7,8);   InChIKey=RJFAYQIBOAGBLC-UHFFFAOYSA-N;   SMILES=C[Se]CCC(N)C(O)=O;   Selenium methionine;   Seleno-DL-methionine
 alt_id: CHEBI:26638;   CHEBI:9098
 xref: CAS:1464-42-2 "ChemIDplus";   CAS:1464-42-2 "NIST Chemistry WebBook";   HMDB:HMDB0003966
 xref_mesh: MESH:D012645
 xref: MetaCyc:SELENOMETHIONINE;   PMID:14969538 "Europe PMC";   PMID:20740325 "Europe PMC";   PMID:21259435 "Europe PMC";   PMID:21286848 "Europe PMC";   PMID:21366307 "Europe PMC";   PMID:21524942 "Europe PMC";   PMID:21603917 "Europe PMC";   PMID:21766323 "Europe PMC";   PMID:21870603 "Europe PMC";   PMID:21877325 "Europe PMC";   Reaxys:1758204 "Reaxys";   Wikipedia:Selenomethionine


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selenomethionine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acd ACD, shelterin complex subunit and telomerase recruitment factor JBrowse link 19 37,665,289 37,668,043 RGD:6480464
G Aco2 aconitase 2 JBrowse link 7 123,102,493 123,145,608 RGD:6480464
G App amyloid beta precursor protein JBrowse link 11 24,425,013 24,641,872 RGD:6480464
G Ar androgen receptor JBrowse link X 67,656,253 67,828,998 RGD:6480464
G Atf2 activating transcription factor 2 JBrowse link 3 60,721,137 60,795,951 RGD:6480464
G Atp6v0a1 ATPase H+ transporting V0 subunit a1 JBrowse link 10 88,914,264 88,967,736 RGD:6480464
G Casp3 caspase 3 JBrowse link 16 48,845,011 48,863,249 RGD:6480464
G Cat catalase JBrowse link 3 93,379,872 93,412,058 RGD:6480464
G Cbx6 chromobox 6 JBrowse link 7 121,047,996 121,058,109 RGD:6480464
G Cdkn1a cyclin-dependent kinase inhibitor 1A JBrowse link 20 6,348,422 6,358,864 RGD:6480464
G Cfl2 cofilin 2 JBrowse link 6 75,759,140 75,763,185 RGD:6480464
G Clstn3 calsyntenin 3 JBrowse link 4 157,044,736 157,078,013 RGD:6480464
G Cnnm3 cyclin and CBS domain divalent metal cation transport mediator 3 JBrowse link 9 43,093,120 43,108,486 RGD:6480464
G Col6a1 collagen type VI alpha 1 chain JBrowse link 20 12,657,913 12,676,370 RGD:6480464
G Crmp1 collapsin response mediator protein 1 JBrowse link 14 78,266,931 78,312,777 RGD:6480464
G Cyhr1 cysteine and histidine rich 1 JBrowse link 7 117,720,909 117,722,734 RGD:6480464
G Ddit3 DNA-damage inducible transcript 3 JBrowse link 7 70,578,564 70,585,074 RGD:6480464
G Dst dystonin JBrowse link 9 37,902,336 38,296,961 RGD:6480464
G Dusp3 dual specificity phosphatase 3 JBrowse link 10 89,904,578 89,918,296 RGD:6480464
G Ece2 endothelin-converting enzyme 2 JBrowse link 11 83,948,896 83,985,429 RGD:6480464
G Ecsit ECSIT signaling integrator JBrowse link 8 23,085,598 23,099,064 RGD:6480464
G Egfr epidermal growth factor receptor JBrowse link 14 99,919,485 100,104,136 RGD:6480464
G Ehd1 EH-domain containing 1 JBrowse link 1 221,644,867 221,667,242 RGD:6480464
G Eif2s1 eukaryotic translation initiation factor 2 subunit alpha JBrowse link 6 102,048,372 102,073,041 RGD:6480464
G Fam102a family with sequence similarity 102, member A JBrowse link 3 11,554,084 11,586,315 RGD:6480464
G Fos Fos proto-oncogene, AP-1 transcription factor subunit JBrowse link 6 109,300,433 109,303,299 RGD:6480464
G Gck glucokinase JBrowse link 14 86,149,146 86,191,589 RGD:6480464
G Gclc glutamate-cysteine ligase, catalytic subunit JBrowse link 8 85,059,051 85,097,471 RGD:6480464
G Gpx1 glutathione peroxidase 1 JBrowse link 8 117,117,430 117,118,528 RGD:6480464
G Grk6 G protein-coupled receptor kinase 6 JBrowse link 17 9,705,917 9,721,921 RGD:6480464
G Gsr glutathione-disulfide reductase JBrowse link 16 62,197,617 62,239,987 RGD:6480464
G Gstp1 glutathione S-transferase pi 1 JBrowse link 1 219,291,679 219,294,147 RGD:6480464
G Hpn hepsin JBrowse link 1 89,534,112 89,549,575 RGD:6480464
G Hspa1a heat shock protein family A (Hsp70) member 1A JBrowse link 20 4,875,834 4,881,751 RGD:6480464
G Hspa5 heat shock protein family A (Hsp70) member 5 JBrowse link 3 13,838,304 13,842,763 RGD:6480464
G Hspe1 heat shock protein family E (Hsp10) member 1 JBrowse link 9 61,691,246 61,724,948 RGD:6480464
G Ifng interferon gamma JBrowse link 7 61,337,383 61,341,419 RGD:6480464
G Ikbkb inhibitor of nuclear factor kappa B kinase subunit beta JBrowse link 16 74,177,233 74,230,809 RGD:6480464
G Il4 interleukin 4 JBrowse link 10 38,963,979 38,969,531 RGD:6480464
G Itm2c integral membrane protein 2C JBrowse link 9 92,916,469 92,930,306 RGD:6480464
G Klhdc3 kelch domain containing 3 JBrowse link 9 16,612,429 16,618,761 RGD:6480464
G L3mbtl4 L3MBTL histone methyl-lysine binding protein 4 JBrowse link 9 116,521,937 116,689,388 RGD:6480464
G Lasp1 LIM and SH3 protein 1 JBrowse link 10 85,744,662 85,785,130 RGD:6480464
G Ltbr lymphotoxin beta receptor JBrowse link 4 157,822,838 157,829,291 RGD:6480464
G Map3k11 mitogen-activated protein kinase kinase kinase 11 JBrowse link 1 221,043,119 221,056,420 RGD:6480464
G Mapk1 mitogen activated protein kinase 1 JBrowse link 11 88,203,863 88,273,301 RGD:6480464
G Mapk3 mitogen activated protein kinase 3 JBrowse link 1 198,192,773 198,198,975 RGD:6480464
G Mapk8 mitogen-activated protein kinase 8 JBrowse link 16 9,620,854 9,709,342 RGD:6480464
G Mrpl54 mitochondrial ribosomal protein L54 JBrowse link 7 11,321,057 11,323,577 RGD:6480464
G Narf nuclear prelamin A recognition factor JBrowse link 10 110,445,765 110,463,735 RGD:6480464
G Ndufv1 NADH:ubiquinone oxidoreductase core subunit V1 JBrowse link 1 219,254,293 219,259,328 RGD:6480464
G Nme6 NME/NM23 nucleoside diphosphate kinase 6 JBrowse link 8 117,920,912 117,928,148 RGD:6480464
G Nos1 nitric oxide synthase 1 JBrowse link 12 44,214,949 44,405,530 RGD:6480464
G Nos2 nitric oxide synthase 2 JBrowse link 10 66,188,290 66,221,621 RGD:6480464
G Nqo1 NAD(P)H quinone dehydrogenase 1 JBrowse link 19 38,422,210 38,437,103 RGD:6480464
G Parvb parvin, beta JBrowse link 7 125,189,827 125,275,977 RGD:6480464
G Pck2 phosphoenolpyruvate carboxykinase 2 (mitochondrial) JBrowse link 15 34,216,735 34,224,357 RGD:6480464
G Pcna proliferating cell nuclear antigen JBrowse link 3 124,880,698 124,884,570 RGD:6480464
G Pcnx3 pecanex 3 JBrowse link 1 221,019,091 221,041,959 RGD:6480464
G Pigu phosphatidylinositol glycan anchor biosynthesis, class U JBrowse link 3 150,803,096 150,885,597 RGD:6480464
G Plg plasminogen JBrowse link 1 48,521,828 48,563,895 RGD:6480464
G Pmvk phosphomevalonate kinase JBrowse link 2 188,784,329 188,793,890 RGD:6480464
G Poll DNA polymerase lambda JBrowse link 1 265,290,337 265,298,847 RGD:6480464
G Ppm1b protein phosphatase, Mg2+/Mn2+ dependent, 1B JBrowse link 6 8,219,385 8,280,127 RGD:6480464
G Prkcz protein kinase C, zeta JBrowse link 5 172,658,071 172,769,492 RGD:6480464
G Rap2a RAP2A, member of RAS oncogene family JBrowse link 15 105,851,543 105,852,033 RGD:6480464
G Rela RELA proto-oncogene, NF-kB subunit JBrowse link 1 220,992,770 221,003,249 RGD:6480464
G Rpusd1 RNA pseudouridine synthase domain containing 1 JBrowse link 10 15,099,104 15,102,968 RGD:6480464
G Scarb1 scavenger receptor class B, member 1 JBrowse link 12 36,694,952 36,761,445 RGD:6480464
G Selenoh selenoprotein H JBrowse link 3 72,070,342 72,071,909 RGD:6480464
G Sema5a semaphorin 5A JBrowse link 2 85,377,318 85,808,970 RGD:6480464
G Shc1 SHC adaptor protein 1 JBrowse link 2 188,745,503 188,757,066 RGD:6480464
G Slc25a1 solute carrier family 25 member 1 JBrowse link 11 87,204,248 87,207,265 RGD:6480464
G Slc3a1 solute carrier family 3 member 1 JBrowse link 6 8,284,937 8,318,649 RGD:6480464
G Slc6a19 solute carrier family 6 member 19 JBrowse link 1 32,199,869 32,218,628 RGD:6480464
G Sod1 superoxide dismutase 1 JBrowse link 11 30,363,282 30,368,858 RGD:6480464
G Sod2 superoxide dismutase 2 JBrowse link 1 47,914,757 47,921,587 RGD:6480464
G Srebf1 sterol regulatory element binding transcription factor 1 JBrowse link 10 46,570,996 46,593,021 RGD:6480464
G Srrt serrate, RNA effector molecule JBrowse link 12 22,457,898 22,471,090 RGD:6480464
G Ssbp1 single stranded DNA binding protein 1 JBrowse link 4 68,634,844 68,645,112 RGD:6480464
G Stx17 syntaxin 17 JBrowse link 5 63,866,346 63,926,276 RGD:6480464
G Taok2 TAO kinase 2 JBrowse link 1 198,301,789 198,354,601 RGD:6480464
G Tbx1 T-box transcription factor 1 JBrowse link 11 86,552,022 86,561,647 RGD:6480464
G Tead3 TEA domain transcription factor 3 JBrowse link 20 7,911,562 7,930,949 RGD:6480464
G Tp53 tumor protein p53 JBrowse link 10 56,186,299 56,198,449 RGD:6480464
G Trex1 three prime repair exonuclease 1 JBrowse link 8 117,796,127 117,797,427 RGD:6480464
G Tsc22d4 TSC22 domain family, member 4 JBrowse link 12 22,008,956 22,021,814 RGD:6480464
G Txnrd1 thioredoxin reductase 1 JBrowse link 7 26,946,124 26,984,400 RGD:6480464
G Txnrd2 thioredoxin reductase 2 JBrowse link 11 86,667,994 86,716,063 RGD:6480464
G Ube2s ubiquitin-conjugating enzyme E2S JBrowse link 1 72,580,424 72,584,484 RGD:6480464
G Vps4a vacuolar protein sorting 4 homolog A JBrowse link 19 39,230,050 39,243,298 RGD:6480464
G Wwp2 WW domain containing E3 ubiquitin protein ligase 2 JBrowse link 19 39,543,246 39,614,624 RGD:6480464
G Xpa XPA, DNA damage recognition and repair factor JBrowse link 5 61,749,767 61,793,641 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19669
    chemical entity 19667
      atom 19665
        nonmetal atom 19531
          selenium atom 3121
            selenium molecular entity 3121
              selenomethionines 93
                selenomethionine 93
                  D-selenomethionine + 0
                  L-selenomethionine + 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19669
    subatomic particle 19665
      composite particle 19665
        hadron 19665
          baryon 19665
            nucleon 19665
              atomic nucleus 19665
                atom 19665
                  main group element atom 19545
                    p-block element atom 19545
                      carbon group element atom 19428
                        carbon atom 19420
                          organic molecular entity 19420
                            heteroorganic entity 19003
                              organochalcogen compound 18718
                                organoselenium compound 590
                                  selenoamino acid 156
                                    selenomethionine 93
                                      D-selenomethionine + 0
                                      L-selenomethionine + 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.