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ONTOLOGY REPORT - ANNOTATIONS


Term:synthetic auxin
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Accession:CHEBI:26841 term browser browse the term
Definition:A synthetic compound exhibiting auxin activity.
Synonyms:related_synonym: synthetic auxins


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(2,4,5-trichlorophenoxy)acetic acid term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abca7 ATP binding cassette subfamily A member 7 JBrowse link 7 12,742,433 12,762,423 RGD:6480464
G Abcb4 ATP binding cassette subfamily B member 4 JBrowse link 4 22,133,984 22,192,687 RGD:6480464
G Abcc2 ATP binding cassette subfamily C member 2 JBrowse link 1 263,554,426 263,612,556 RGD:6480464
G Acap3 ArfGAP with coiled-coil, ankyrin repeat and PH domains 3 JBrowse link 5 173,340,060 173,354,756 RGD:6480464
G Acer2 alkaline ceramidase 2 JBrowse link 5 105,230,540 105,279,732 RGD:6480464
G Adgrb2 adhesion G protein-coupled receptor B2 JBrowse link 5 148,168,530 148,231,587 RGD:6480464
G Adh4 alcohol dehydrogenase 4 (class II), pi polypeptide JBrowse link 2 243,702,035 243,720,063 RGD:6480464
G Alpi alkaline phosphatase, intestinal JBrowse link 9 94,197,616 94,201,910 RGD:6480464
G Ar androgen receptor JBrowse link X 67,656,253 67,828,998 RGD:6480464
G Arhgap32 Rho GTPase activating protein 32 JBrowse link 8 33,131,874 33,392,198 RGD:6480464
G Arsg arylsulfatase G JBrowse link 10 97,722,550 97,859,975 RGD:6480464
G Basp1 brain abundant, membrane attached signal protein 1 JBrowse link 2 77,586,424 77,632,626 RGD:6480464
G C1qtnf4 C1q and TNF related 4 JBrowse link 3 79,713,580 79,718,018 RGD:6480464
G Cacnb3 calcium voltage-gated channel auxiliary subunit beta 3 JBrowse link 7 140,311,120 140,324,902 RGD:6480464
G Camk1d calcium/calmodulin-dependent protein kinase ID JBrowse link 17 76,532,611 76,938,956 RGD:6480464
G Capn6 calpain 6 JBrowse link X 115,049,113 115,073,824 RGD:6480464
G Cdh1 cadherin 1 JBrowse link 19 38,768,467 38,838,395 RGD:6480464
G Cirbp cold inducible RNA binding protein JBrowse link 7 12,400,066 12,405,054 RGD:6480464
G Ckm creatine kinase, M-type JBrowse link 1 80,321,507 80,331,841 RGD:6480464
G Col15a1 collagen type XV alpha 1 chain JBrowse link 5 62,840,360 62,950,240 RGD:6480464
G Cyp7b1 cytochrome P450 family 7 subfamily B member 1 JBrowse link 2 102,701,903 102,871,257 RGD:6480464
G Ddc dopa decarboxylase JBrowse link 14 91,905,919 91,996,816 RGD:6480464
G Eepd1 endonuclease/exonuclease/phosphatase family domain containing 1 JBrowse link 8 26,651,241 26,758,330 RGD:6480464
G Ephx1 epoxide hydrolase 1 JBrowse link 13 99,271,390 99,300,580 RGD:6480464
G Ephx2 epoxide hydrolase 2 JBrowse link 15 42,757,241 42,794,211 RGD:6480464
G Esr1 estrogen receptor 1 JBrowse link 1 41,192,029 41,594,799 RGD:6480464
G Far1 fatty acyl CoA reductase 1 JBrowse link 1 178,351,674 178,412,838 RGD:6480464
G Fkbp5 FKBP prolyl isomerase 5 JBrowse link 20 7,976,704 8,097,290 RGD:6480464
G Fmo2 flavin containing dimethylaniline monoxygenase 2 JBrowse link 13 80,752,526 80,775,264 RGD:6480464
G G0s2 G0/G1switch 2 JBrowse link 13 112,004,140 112,005,052 RGD:6480464
G Gbf1 golgi brefeldin A resistant guanine nucleotide exchange factor 1 JBrowse link 1 265,904,616 266,033,107 RGD:6480464
G Gclc glutamate-cysteine ligase, catalytic subunit JBrowse link 8 85,059,051 85,097,471 RGD:6480464
G Gde1 glycerophosphodiester phosphodiesterase 1 JBrowse link 1 188,367,550 188,407,125 RGD:6480464
G Gfra1 GDNF family receptor alpha 1 JBrowse link 1 279,203,046 279,572,789 RGD:6480464
G Git2 GIT ArfGAP 2 JBrowse link 12 47,590,110 47,630,991 RGD:6480464
G Gmppb GDP-mannose pyrophosphorylase B JBrowse link 8 116,826,251 116,856,159 RGD:6480464
G Got1 glutamic-oxaloacetic transaminase 1 JBrowse link 1 263,246,248 263,269,762 RGD:6480464
G Gpm6a glycoprotein m6a JBrowse link 16 39,367,697 39,719,292 RGD:6480464
G Gpr12 G protein-coupled receptor 12 JBrowse link 12 10,253,710 10,257,135 RGD:6480464
G Gpr85 G protein-coupled receptor 85 JBrowse link 4 40,377,705 40,387,147 RGD:6480464
G Hapln1 hyaluronan and proteoglycan link protein 1 JBrowse link 2 18,354,542 18,419,077 RGD:6480464
G Hmox1 heme oxygenase 1 JBrowse link 19 14,508,634 14,515,455 RGD:6480464
G Hspa8 heat shock protein family A (Hsp70) member 8 JBrowse link 8 44,989,401 44,993,261 RGD:6480464
G Hspb1 heat shock protein family B (small) member 1 JBrowse link 12 23,839,390 23,841,051 RGD:6480464
G Hsph1 heat shock protein family H (Hsp110) member 1 JBrowse link 12 6,322,685 6,341,898 RGD:6480464
G Ido2 indoleamine 2,3-dioxygenase 2 JBrowse link 16 72,232,852 72,291,227 RGD:6480464
G Ihh Indian hedgehog signaling molecule JBrowse link 9 82,208,223 82,214,440 RGD:6480464
G Ikbke inhibitor of nuclear factor kappa B kinase subunit epsilon JBrowse link 13 48,031,325 48,056,394 RGD:6480464
G Il1r1 interleukin 1 receptor type 1 JBrowse link 9 46,962,291 47,038,139 RGD:6480464
G Insc INSC, spindle orientation adaptor protein JBrowse link 1 184,299,200 184,407,487 RGD:6480464
G Klf5 Kruppel-like factor 5 JBrowse link 15 83,703,796 83,722,921 RGD:6480464
G Limch1 LIM and calponin homology domains 1 JBrowse link 14 42,760,363 43,072,976 RGD:6480464
G Lmcd1 LIM and cysteine-rich domains 1 JBrowse link 4 144,192,989 144,252,554 RGD:6480464
G LOC102547963 leucine-rich repeat and transmembrane domain-containing protein 1-like JBrowse link 16 5,078,506 5,089,888 RGD:6480464
G LOC103690086 uncharacterized LOC103690086 JBrowse link 14 5,642,357 5,646,406 RGD:6480464
G Lpar4 lysophosphatidic acid receptor 4 JBrowse link X 78,042,859 78,056,347 RGD:6480464
G Lpin1 lipin 1 JBrowse link 6 41,796,214 41,905,149 RGD:6480464
G Lrtm1 leucine-rich repeats and transmembrane domains 1 JBrowse link 16 4,993,728 5,005,110 RGD:6480464
G Matk megakaryocyte-associated tyrosine kinase JBrowse link 7 11,325,246 11,334,311 RGD:6480464
G Mpdz multiple PDZ domain crumbs cell polarity complex component JBrowse link 5 99,413,184 99,566,356 RGD:6480464
G Mt1 metallothionein 1 JBrowse link 19 11,301,991 11,303,007 RGD:6480464
G Mt4 metallothionein 4 JBrowse link 19 11,339,767 11,341,863 RGD:6480464
G Mvd mevalonate diphosphate decarboxylase JBrowse link 19 55,258,910 55,268,933 RGD:6480464
G Mybph myosin binding protein H JBrowse link 13 51,034,228 51,041,903 RGD:6480464
G Ndrg4 NDRG family member 4 JBrowse link 19 9,766,439 9,802,396 RGD:6480464
G Nip7 nucleolar pre-rRNA processing protein NIP7 JBrowse link 19 39,257,586 39,259,728 RGD:6480464
G Nrg4 neuregulin 4 JBrowse link 8 59,782,789 59,849,433 RGD:6480464
G Ogn osteoglycin JBrowse link 17 14,607,442 14,628,274 RGD:6480464
G Olr346 olfactory receptor 346 JBrowse link 1 229,849,892 229,850,818 RGD:6480464
G Pdzd3 PDZ domain containing 3 JBrowse link 8 48,577,905 48,582,353 RGD:6480464
G Pfkp phosphofructokinase, platelet JBrowse link 17 68,510,765 68,574,387 RGD:6480464
G Plin4 perilipin 4 JBrowse link 9 10,963,494 10,972,360 RGD:6480464
G Por cytochrome p450 oxidoreductase JBrowse link 12 23,998,411 24,017,063 RGD:6480464
G Ppfibp1 PPFIA binding protein 1 JBrowse link 4 181,285,179 181,428,157 RGD:6480464
G Ppp1r3a protein phosphatase 1, regulatory subunit 3A JBrowse link 4 41,171,486 41,212,116 RGD:6480464
G Ppp1r3g protein phosphatase 1, regulatory subunit 3G JBrowse link 17 29,566,032 29,570,294 RGD:6480464
G Prok1 prokineticin 1 JBrowse link 2 209,986,503 209,994,438 RGD:6480464
G Prr9 proline rich 9 JBrowse link 2 192,025,457 192,036,073 RGD:6480464
G Ptp4a1 protein tyrosine phosphatase 4A1 JBrowse link 9 37,223,363 37,254,222 RGD:6480464
G Retreg1 reticulophagy regulator 1 JBrowse link 2 78,391,921 78,401,569 RGD:6480464
G Rprd1a regulation of nuclear pre-mRNA domain containing 1A JBrowse link 18 16,450,160 16,497,913 RGD:6480464
G Selenop selenoprotein P JBrowse link 2 53,105,912 53,116,198 RGD:6480464
G Sema3c semaphorin 3C JBrowse link 4 14,318,276 14,490,438 RGD:6480464
G Sgk2 serum/glucocorticoid regulated kinase 2 JBrowse link 3 159,361,313 159,385,843 RGD:6480464
G Slc24a2 solute carrier family 24 member 2 JBrowse link 5 105,336,287 105,579,959 RGD:6480464
G Slc25a32 solute carrier family 25 member 32 JBrowse link 7 77,983,885 78,005,058 RGD:6480464
G Slc66a1 solute carrier family 66 member 1 JBrowse link 5 157,744,945 157,759,370 RGD:6480464
G Slc6a15 solute carrier family 6 member 15 JBrowse link 7 45,328,207 45,381,920 RGD:6480464
G Snx7 sorting nexin 7 JBrowse link 2 221,015,302 221,099,810 RGD:6480464
G Spon2 spondin 2 JBrowse link 14 82,815,158 82,824,529 RGD:6480464
G Srebf1 sterol regulatory element binding transcription factor 1 JBrowse link 10 46,570,996 46,593,021 RGD:6480464
G Svil supervillin JBrowse link 17 55,230,298 55,425,967 RGD:6480464
G Tacc2 transforming, acidic coiled-coil containing protein 2 JBrowse link 1 201,140,264 201,329,612 RGD:6480464
G Tbc1d8 TBC1 domain family, member 8 JBrowse link 9 46,090,613 46,206,672 RGD:6480464
G Tcea2 transcription elongation factor A2 JBrowse link 3 177,187,686 177,195,898 RGD:6480464
G Thra thyroid hormone receptor alpha JBrowse link 10 86,657,285 86,684,935 RGD:6480464
G Thrb thyroid hormone receptor beta JBrowse link 15 8,890,578 9,239,815 RGD:6480464
G Tom1l2 target of myb1 like 2 membrane trafficking protein JBrowse link 10 46,599,392 46,720,921 RGD:6480464
G Trib3 tribbles pseudokinase 3 JBrowse link 3 147,814,056 147,819,650 RGD:6480464
G Tril TLR4 interactor with leucine-rich repeats JBrowse link 4 83,967,695 83,972,540 RGD:6480464
G Tsc22d1 TSC22 domain family, member 1 JBrowse link 15 58,554,358 58,658,156 RGD:6480464
G Ugt2a3 UDP glucuronosyltransferase family 2 member A3 JBrowse link 14 22,251,507 22,267,899 RGD:6480464
G Usp2 ubiquitin specific peptidase 2 JBrowse link 8 48,403,985 48,432,525 RGD:6480464
G Vcam1 vascular cell adhesion molecule 1 JBrowse link 2 219,071,193 219,090,931 RGD:6480464
G Veph1 ventricular zone expressed PH domain-containing 1 JBrowse link 2 157,869,383 158,156,266 RGD:6480464
G Wars2 tryptophanyl tRNA synthetase 2 (mitochondrial) JBrowse link 2 201,170,363 201,256,115 RGD:6480464
(4-chloro-2-methylphenoxy)acetic acid term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Clcnka chloride voltage-gated channel Ka JBrowse link 5 159,931,497 159,946,483 RGD:6480464
G Clcnkb chloride voltage-gated channel Kb JBrowse link 5 159,950,384 159,973,576 RGD:6480464
G Slc1a2 solute carrier family 1 member 2 JBrowse link 3 92,518,679 92,665,731 RGD:6480464
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:6480464
1-naphthylacetic acid term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ces2c carboxylesterase 2C JBrowse link 1 282,640,752 282,648,319 RGD:6480464
G Ifng interferon gamma JBrowse link 7 61,337,383 61,341,419 RGD:6480464
G Il2 interleukin 2 JBrowse link 2 123,847,150 123,851,854 RGD:6480464
G Il2ra interleukin 2 receptor subunit alpha JBrowse link 17 70,500,672 70,547,929 RGD:6480464
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:6480464
G Ugt2b17 UDP glucuronosyltransferase family 2 member B17 JBrowse link 14 22,724,399 22,736,148 RGD:6480464
2,4-D term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcb4 ATP binding cassette subfamily B member 4 JBrowse link 4 22,133,984 22,192,687 RGD:6480464
G Alb albumin JBrowse link 14 19,176,275 19,191,793 RGD:6480464
G Ar androgen receptor JBrowse link X 67,656,253 67,828,998 RGD:6480464
G Ccdc120 coiled-coil domain containing 120 JBrowse link X 15,610,230 15,616,727 RGD:6480464
G Ccl11 C-C motif chemokine ligand 11 JBrowse link 10 69,434,965 69,439,566 RGD:6480464
G Ccl2 C-C motif chemokine ligand 2 JBrowse link 10 69,412,065 69,413,863 RGD:6480464
G Ccl4 C-C motif chemokine ligand 4 JBrowse link 10 70,870,926 70,886,357 RGD:6480464
G Cldn1 claudin 1 JBrowse link 11 77,815,216 77,830,373 RGD:6480464
G Clk1 CDC-like kinase 1 JBrowse link 9 65,296,777 65,308,017 RGD:6480464
G Cnp 2',3'-cyclic nucleotide 3' phosphodiesterase JBrowse link 10 88,490,798 88,497,357 RGD:6480464
G Crat carnitine O-acetyltransferase JBrowse link 3 8,967,984 8,981,959 RGD:6480464
G Cyp17a1 cytochrome P450, family 17, subfamily a, polypeptide 1 JBrowse link 1 266,422,127 266,429,947 RGD:6480464
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 JBrowse link 8 62,472,087 62,478,122 RGD:6480464
G Cyp1a2 cytochrome P450, family 1, subfamily a, polypeptide 2 JBrowse link 8 62,451,360 62,458,244 RGD:6480464
G Cyp1b1 cytochrome P450, family 1, subfamily b, polypeptide 1 JBrowse link 6 2,308,179 2,316,739 RGD:6480464
G Dbh dopamine beta-hydroxylase JBrowse link 3 5,709,236 5,731,895 RGD:6480464
G Dclre1c DNA cross-link repair 1C JBrowse link 17 78,782,512 78,812,140 RGD:6480464
G Ddb2 damage specific DNA binding protein 2 JBrowse link 3 80,030,437 80,052,984 RGD:6480464
G Ephx1 epoxide hydrolase 1 JBrowse link 13 99,271,390 99,300,580 RGD:6480464
G Ephx2 epoxide hydrolase 2 JBrowse link 15 42,757,241 42,794,211 RGD:6480464
G Fth1 ferritin heavy chain 1 JBrowse link 1 226,030,940 226,033,228 RGD:6480464
G Ftl1 ferritin light chain 1 JBrowse link 1 101,448,190 101,450,034 RGD:6480464
G Gfap glial fibrillary acidic protein JBrowse link 10 90,990,762 90,999,435 RGD:6480464
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase JBrowse link 2 27,480,224 27,500,654 RGD:6480464
G Hmgcs1 3-hydroxy-3-methylglutaryl-CoA synthase 1 JBrowse link 2 52,427,351 52,445,082 RGD:6480464
G Ifng interferon gamma JBrowse link 7 61,337,383 61,341,419 RGD:6480464
G Il1rl1 interleukin 1 receptor-like 1 JBrowse link 9 47,133,483 47,184,316 RGD:6480464
G Il2 interleukin 2 JBrowse link 2 123,847,150 123,851,854 RGD:6480464
G Il2ra interleukin 2 receptor subunit alpha JBrowse link 17 70,500,672 70,547,929 RGD:6480464
G Il4 interleukin 4 JBrowse link 10 38,963,979 38,969,531 RGD:6480464
G Il5 interleukin 5 JBrowse link 10 39,066,716 39,069,587 RGD:6480464
G Il6 interleukin 6 JBrowse link 4 3,043,231 3,047,807 RGD:6480464
G Ldha lactate dehydrogenase A JBrowse link 1 102,900,288 102,909,713 RGD:6480464
G Mbp myelin basic protein JBrowse link 18 79,326,738 79,437,310 RGD:6480464
G Myc MYC proto-oncogene, bHLH transcription factor JBrowse link 7 102,586,313 102,591,240 RGD:6480464
G Nr1i2 nuclear receptor subfamily 1, group I, member 2 JBrowse link 11 65,022,100 65,058,546 RGD:6480464
G Ocln occludin JBrowse link 2 30,527,327 30,577,218 RGD:6480464
G Oxt oxytocin/neurophysin I prepropeptide JBrowse link 3 123,106,694 123,107,534 RGD:6480464
G Pcna proliferating cell nuclear antigen JBrowse link 3 124,880,698 124,884,570 RGD:6480464
G Pfkm phosphofructokinase, muscle JBrowse link 7 139,702,066 139,722,132 RGD:6480464
G Ppara peroxisome proliferator activated receptor alpha JBrowse link 7 126,618,872 126,687,282 RGD:6480464
G Prl prolactin JBrowse link 17 39,814,236 39,824,299 RGD:6480464
G Ptger3 prostaglandin E receptor 3 JBrowse link 2 263,895,093 263,979,682 RGD:6480464
G Slc16a3 solute carrier family 16 member 3 JBrowse link 10 110,138,519 110,148,360 RGD:6480464
G Slc22a12 solute carrier family 22 member 12 JBrowse link 1 221,910,787 221,919,277 RGD:6480464
G Slc22a20 solute carrier family 22, member 20 JBrowse link 1 221,327,608 221,344,367 RGD:6480464
G Slc22a6 solute carrier family 22 member 6 JBrowse link 1 224,824,809 224,833,284 RGD:6480464
G Slc2a3 solute carrier family 2 member 3 JBrowse link 4 155,549,991 155,626,018 RGD:6480464
G Th tyrosine hydroxylase JBrowse link 1 216,073,034 216,080,287 RGD:6480464
G Thrb thyroid hormone receptor beta JBrowse link 15 8,890,578 9,239,815 RGD:6480464
G Tjp1 tight junction protein 1 JBrowse link 1 126,146,489 126,515,359 RGD:6480464
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:6480464
G Usp19 ubiquitin specific peptidase 19 JBrowse link 8 117,280,690 117,291,729 RGD:6480464
G Vegfa vascular endothelial growth factor A JBrowse link 9 17,340,341 17,355,681 RGD:6480464
dicamba term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acox1 acyl-CoA oxidase 1 JBrowse link 10 104,724,534 104,748,003 RGD:6480464
G Adipoq adiponectin, C1Q and collagen domain containing JBrowse link 11 81,330,845 81,344,488 RGD:6480464
G Alb albumin JBrowse link 14 19,176,275 19,191,793 RGD:6480464
G Ins2 insulin 2 JBrowse link 1 215,856,967 215,858,034 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19614
    role 19557
      biological role 19550
        xenobiotic 18180
          synthetic auxin 163
            (2,4,5-trichlorophenoxy)acetic acid 106
            (4-chloro-2-methylphenoxy)acetic acid 4
            (R)-dichlorprop + 0
            1-naphthylacetic acid 6
            2,3,6-TBA 0
            2,4-D 54
            2,4-DB 0
            aminocyclopyrachlor + 0
            aminocyclopyrachlor-methyl 0
            benazolin + 0
            benazolin-dimethylammonium 0
            benazolin-ethyl 0
            benazolin-potassium 0
            chlorfenac 0
            chlorfenac(1-) + 0
            chlorfenac-ammonium 0
            chlorfenac-sodium 0
            dicamba 4
            dichlorprop 0
            florpyrauxifen + 0
            florpyrauxifen-benzyl 0
            halauxifen-methyl 0
            quinclorac + 0
            quinclorac-dimethylammonium 0
            quinmerac 0
            tricamba 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19614
    role 19557
      biological role 19550
        pharmacological role 18676
          agonist 17984
            hormone 17738
              plant hormone 4896
                auxin 1266
                  synthetic auxin 163
                    (2,4,5-trichlorophenoxy)acetic acid 106
                    (4-chloro-2-methylphenoxy)acetic acid 4
                    (R)-dichlorprop + 0
                    1-naphthylacetic acid 6
                    2,3,6-TBA 0
                    2,4-D 54
                    2,4-DB 0
                    aminocyclopyrachlor + 0
                    aminocyclopyrachlor-methyl 0
                    benazolin + 0
                    benazolin-dimethylammonium 0
                    benazolin-ethyl 0
                    benazolin-potassium 0
                    chlorfenac 0
                    chlorfenac(1-) + 0
                    chlorfenac-ammonium 0
                    chlorfenac-sodium 0
                    dicamba 4
                    dichlorprop 0
                    florpyrauxifen + 0
                    florpyrauxifen-benzyl 0
                    halauxifen-methyl 0
                    quinclorac + 0
                    quinclorac-dimethylammonium 0
                    quinmerac 0
                    tricamba 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.