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ONTOLOGY REPORT - ANNOTATIONS


Term:prostaglandins D
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Accession:CHEBI:26337 term browser browse the term
Synonyms:related_synonym: Formula=C5H6O2R2;   PGD;   SMILES=O[C@H]1CC(=O)[C@H]([*])[C@H]1[*]


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13,14-dihydro-15-ketoprostaglandin D2 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CXCL2 C-X-C motif chemokine ligand 2 JBrowse link 4 74,097,040 74,099,195 RGD:6480464
G GATA3 GATA binding protein 3 JBrowse link 10 8,045,420 8,075,198 RGD:6480464
G IL4 interleukin 4 JBrowse link 5 132,673,986 132,682,678 RGD:6480464
G PTGDR prostaglandin D2 receptor JBrowse link 14 52,267,256 52,276,724 RGD:6480464
G PTGDR2 prostaglandin D2 receptor 2 JBrowse link 11 60,850,933 60,855,950 RGD:6480464
13,14-dihydro-Delta(12)-prostaglandin J2 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BDNF brain derived neurotrophic factor JBrowse link 11 27,654,893 27,722,030 RGD:6480464
G GDNF glial cell derived neurotrophic factor JBrowse link 5 37,812,677 37,840,044 RGD:6480464
G NFE2L2 nuclear factor, erythroid 2 like 2 JBrowse link 2 177,230,303 177,265,131 RGD:6480464
G NGF nerve growth factor JBrowse link 1 115,285,915 115,338,253 RGD:6480464
15-deoxy-Delta(12,14)-prostaglandin J2 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ABCC1 ATP binding cassette subfamily C member 1 JBrowse link 16 15,949,616 16,143,062 RGD:6480464
G ABCC3 ATP binding cassette subfamily C member 3 JBrowse link 17 50,634,881 50,692,253 RGD:6480464
G AGT angiotensinogen JBrowse link 1 230,702,523 230,745,583 RGD:6480464
G AKR1C3 aldo-keto reductase family 1 member C3 JBrowse link 10 5,048,766 5,107,686 RGD:6480464
G AKT1 AKT serine/threonine kinase 1 JBrowse link 14 104,769,349 104,795,748 RGD:6480464
G BGLAP bone gamma-carboxyglutamate protein JBrowse link 1 156,242,184 156,243,317 RGD:6480464
G BIRC2 baculoviral IAP repeat containing 2 JBrowse link 11 102,347,182 102,378,670 RGD:6480464
G BIRC3 baculoviral IAP repeat containing 3 JBrowse link 11 102,317,373 102,339,403 RGD:6480464
G CASP3 caspase 3 JBrowse link 4 184,627,696 184,649,475 RGD:6480464
G CASP8 caspase 8 JBrowse link 2 201,233,443 201,287,711 RGD:6480464
G CASP9 caspase 9 JBrowse link 1 15,491,401 15,524,912 RGD:6480464
G CAT catalase JBrowse link 11 34,438,934 34,472,060 RGD:6480464
G CCL2 C-C motif chemokine ligand 2 JBrowse link 17 34,255,285 34,257,203 RGD:6480464
G CCL5 C-C motif chemokine ligand 5 JBrowse link 17 35,871,491 35,880,360 RGD:6480464
G CCN2 cellular communication network factor 2 JBrowse link 6 131,948,176 131,951,372 RGD:6480464
G CCNA2 cyclin A2 JBrowse link 4 121,816,444 121,823,883 RGD:6480464
G CCNB1 cyclin B1 JBrowse link 5 69,167,010 69,178,245 RGD:6480464
G CCND3 cyclin D3 JBrowse link 6 41,934,933 42,048,894 RGD:6480464
G CCNE1 cyclin E1 JBrowse link 19 29,811,991 29,824,312 RGD:6480464
G CDK2 cyclin dependent kinase 2 JBrowse link 12 55,966,830 55,972,789 RGD:6480464
G CDKN1A cyclin dependent kinase inhibitor 1A JBrowse link 6 36,676,463 36,687,332 RGD:6480464
G CDKN1B cyclin dependent kinase inhibitor 1B JBrowse link 12 12,717,368 12,722,369 RGD:6480464
G CEBPA CCAAT enhancer binding protein alpha JBrowse link 19 33,299,934 33,302,564 RGD:6480464
G CFLAR CASP8 and FADD like apoptosis regulator JBrowse link 2 201,116,104 201,176,687 RGD:6480464
G CGB3 chorionic gonadotropin subunit beta 3 JBrowse link 19 49,022,869 49,024,375 RGD:6480464
G CHUK component of inhibitor of nuclear factor kappa B kinase complex JBrowse link 10 100,188,298 100,229,610 RGD:6480464
G COL1A1 collagen type I alpha 1 chain JBrowse link 17 50,184,096 50,201,649 RGD:6480464
G CSF2 colony stimulating factor 2 JBrowse link 5 132,073,789 132,076,170 RGD:6480464
G CXCL8 C-X-C motif chemokine ligand 8 JBrowse link 4 73,740,569 73,743,716 RGD:6480464
G CYP4A11 cytochrome P450 family 4 subfamily A member 11 JBrowse link 1 46,929,177 46,941,476 RGD:6480464
G DDX58 DExD/H-box helicase 58 JBrowse link 9 32,455,302 32,526,196 RGD:6480464
G EGR1 early growth response 1 JBrowse link 5 138,465,479 138,469,303 RGD:6480464
G FABP4 fatty acid binding protein 4 JBrowse link 8 81,478,419 81,483,233 RGD:6480464
G FAS Fas cell surface death receptor JBrowse link 10 88,968,429 89,017,059 RGD:6480464
G FOS Fos proto-oncogene, AP-1 transcription factor subunit JBrowse link 14 75,278,828 75,282,230 RGD:6480464
G GCLC glutamate-cysteine ligase catalytic subunit JBrowse link 6 53,497,341 53,545,101 RGD:6480464
G GFAP glial fibrillary acidic protein JBrowse link 17 44,903,159 44,915,552 RGD:6480464
G GSTA3 glutathione S-transferase alpha 3 JBrowse link 6 52,896,646 52,909,799 RGD:6480464
G GSTM1 glutathione S-transferase mu 1 JBrowse link 1 109,687,817 109,693,745 RGD:6480464
G GSTP1 glutathione S-transferase pi 1 JBrowse link 11 67,583,812 67,586,653 RGD:6480464
G HDAC1 histone deacetylase 1 JBrowse link 1 32,292,083 32,333,628 RGD:6480464
G HDAC2 histone deacetylase 2 JBrowse link 6 113,933,028 113,971,148 RGD:6480464
G HDAC3 histone deacetylase 3 JBrowse link 5 141,620,876 141,636,856 RGD:6480464
G HIF1A hypoxia inducible factor 1 subunit alpha JBrowse link 14 61,695,513 61,748,259 RGD:6480464
G HMOX1 heme oxygenase 1 JBrowse link 22 35,381,096 35,394,207 RGD:6480464
G HSF1 heat shock transcription factor 1 JBrowse link 8 144,291,603 144,314,720 RGD:6480464
G HSPB1 heat shock protein family B (small) member 1 JBrowse link 7 76,302,673 76,304,292 RGD:6480464
G IFNG interferon gamma JBrowse link 12 68,154,768 68,159,740 RGD:6480464
G IL1A interleukin 1 alpha JBrowse link 2 112,773,925 112,784,493 RGD:6480464
G IL1B interleukin 1 beta JBrowse link 2 112,829,751 112,836,843 RGD:6480464
G IL1RN interleukin 1 receptor antagonist JBrowse link 2 113,099,365 113,134,016 RGD:6480464
G IL4 interleukin 4 JBrowse link 5 132,673,986 132,682,678 RGD:6480464
G IL6 interleukin 6 JBrowse link 7 22,725,889 22,732,002 RGD:6480464
G INS insulin JBrowse link 11 2,159,779 2,161,209 RGD:6480464
G IRF1 interferon regulatory factor 1 JBrowse link 5 132,481,609 132,490,789 RGD:6480464
G JAK2 Janus kinase 2 JBrowse link 9 4,985,086 5,129,948 RGD:6480464
G JUN Jun proto-oncogene, AP-1 transcription factor subunit JBrowse link 1 58,780,791 58,784,047 RGD:6480464
G KLF6 Kruppel like factor 6 JBrowse link 10 3,775,996 3,785,281 RGD:6480464
G LEP leptin JBrowse link 7 128,241,201 128,257,629 RGD:6480464
G LIF LIF interleukin 6 family cytokine JBrowse link 22 30,240,453 30,257,487 RGD:6480464
G LPL lipoprotein lipase JBrowse link 8 19,939,253 19,967,259 RGD:6480464
G MAPK1 mitogen-activated protein kinase 1 JBrowse link 22 21,759,657 21,867,680 RGD:6480464
G MAPK3 mitogen-activated protein kinase 3 JBrowse link 16 30,114,105 30,123,309 RGD:6480464
G MED1 mediator complex subunit 1 JBrowse link 17 39,404,285 39,451,281 RGD:6480464
G MMP1 matrix metallopeptidase 1 JBrowse link 11 102,789,919 102,798,160 RGD:6480464
G MMP9 matrix metallopeptidase 9 JBrowse link 20 46,008,908 46,016,561 RGD:6480464
G MTOR mechanistic target of rapamycin kinase JBrowse link 1 11,106,535 11,273,497 RGD:6480464
G NES nestin JBrowse link 1 156,668,763 156,677,407 RGD:6480464
G NFE2L2 nuclear factor, erythroid 2 like 2 JBrowse link 2 177,230,303 177,265,131 RGD:6480464
G NFKB1 nuclear factor kappa B subunit 1 JBrowse link 4 102,501,266 102,617,302 RGD:6480464
G NFKBIA NFKB inhibitor alpha JBrowse link 14 35,401,513 35,404,749 RGD:6480464
G NOS2 nitric oxide synthase 2 JBrowse link 17 27,756,766 27,800,529 RGD:6480464
G NOS3 nitric oxide synthase 3 JBrowse link 7 150,991,017 151,014,588 RGD:6480464
G NR3C1 nuclear receptor subfamily 3 group C member 1 JBrowse link 5 143,277,931 143,435,512 RGD:6480464
G PARK7 Parkinsonism associated deglycase JBrowse link 1 7,961,654 7,985,505 RGD:6480464
G PARP1 poly(ADP-ribose) polymerase 1 JBrowse link 1 226,360,691 226,408,093 RGD:6480464
G PCK1 phosphoenolpyruvate carboxykinase 1 JBrowse link 20 57,561,110 57,568,121 RGD:6480464
G PPARA peroxisome proliferator activated receptor alpha JBrowse link 22 46,150,526 46,243,756 RGD:6480464
G PPARD peroxisome proliferator activated receptor delta JBrowse link 6 35,342,558 35,428,191 RGD:6480464
G PPARG peroxisome proliferator activated receptor gamma JBrowse link 3 12,287,368 12,434,344 RGD:6480464
G PTEN phosphatase and tensin homolog JBrowse link 10 87,863,625 87,971,930 RGD:6480464
G PTGDR prostaglandin D2 receptor JBrowse link 14 52,267,256 52,276,724 RGD:6480464
G PTGDR2 prostaglandin D2 receptor 2 JBrowse link 11 60,850,933 60,855,950 RGD:6480464
G PTGS1 prostaglandin-endoperoxide synthase 1 JBrowse link 9 122,369,906 122,395,703 RGD:6480464
G PTGS2 prostaglandin-endoperoxide synthase 2 JBrowse link 1 186,671,791 186,680,423 RGD:6480464
G PTPN11 protein tyrosine phosphatase non-receptor type 11 JBrowse link 12 112,418,915 112,509,918 RGD:6480464
G RAF1 Raf-1 proto-oncogene, serine/threonine kinase JBrowse link 3 12,583,601 12,664,117 RGD:6480464
G RARB retinoic acid receptor beta JBrowse link 3 24,829,323 25,597,932 RGD:6480464
G RB1 RB transcriptional corepressor 1 JBrowse link 13 48,303,751 48,481,890 RGD:6480464
G RELA RELA proto-oncogene, NF-kB subunit JBrowse link 11 65,653,596 65,662,972 RGD:6480464
G RPS6KA1 ribosomal protein S6 kinase A1 JBrowse link 1 26,529,761 26,575,028 RGD:6480464
G RPS6KB1 ribosomal protein S6 kinase B1 JBrowse link 17 59,893,046 59,950,574 RGD:6480464
G RUNX2 RUNX family transcription factor 2 JBrowse link 6 45,328,317 45,551,082 RGD:6480464
G RXRA retinoid X receptor alpha JBrowse link 9 134,326,455 134,440,586 RGD:6480464
G SERPINE1 serpin family E member 1 JBrowse link 7 101,127,104 101,139,247 RGD:6480464
G SMAD2 SMAD family member 2 JBrowse link 18 47,808,957 47,931,188 RGD:6480464
G SOCS1 suppressor of cytokine signaling 1 JBrowse link 16 11,254,417 11,256,182 RGD:6480464
G SOCS3 suppressor of cytokine signaling 3 JBrowse link 17 78,356,778 78,360,925 RGD:6480464
G SPP1 secreted phosphoprotein 1 JBrowse link 4 87,975,650 87,983,411 RGD:6480464
G STAT1 signal transducer and activator of transcription 1 JBrowse link 2 190,968,989 191,014,250 RGD:6480464
G STAT3 signal transducer and activator of transcription 3 JBrowse link 17 42,313,324 42,388,502 RGD:6480464
G TBXA2R thromboxane A2 receptor JBrowse link 19 3,594,507 3,608,749 RGD:6480464
G TG thyroglobulin JBrowse link 8 132,866,943 133,134,902 RGD:6480464
G TGFB1 transforming growth factor beta 1 JBrowse link 19 41,330,323 41,353,922 RGD:6480464
G TH tyrosine hydroxylase JBrowse link 11 2,163,929 2,174,081 RGD:6480464
G TLR2 toll like receptor 2 JBrowse link 4 153,684,080 153,710,643 RGD:6480464
G TNF tumor necrosis factor JBrowse link 6 31,575,565 31,578,336 RGD:6480464
G TSHB thyroid stimulating hormone subunit beta JBrowse link 1 115,029,826 115,035,935 RGD:6480464
G TSLP thymic stromal lymphopoietin JBrowse link 5 111,070,080 111,078,026 RGD:6480464
G VIM vimentin JBrowse link 10 17,228,241 17,237,593 RGD:6480464
G WNT10B Wnt family member 10B JBrowse link 12 48,965,340 48,979,587 RGD:6480464
G XIAP X-linked inhibitor of apoptosis JBrowse link X 123,859,708 123,913,972 RGD:6480464
prostaglandin D2 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AKR1C3 aldo-keto reductase family 1 member C3 JBrowse link 10 5,048,766 5,107,686 RGD:6480464
G ARHGDIB Rho GDP dissociation inhibitor beta JBrowse link 12 14,942,015 14,961,601 RGD:6480464
G CASP3 caspase 3 JBrowse link 4 184,627,696 184,649,475 RGD:6480464
G CRYAB crystallin alpha B JBrowse link 11 111,908,564 111,923,740 RGD:6480464
G CXCL2 C-X-C motif chemokine ligand 2 JBrowse link 4 74,097,040 74,099,195 RGD:6480464
G EGF epidermal growth factor JBrowse link 4 109,912,883 110,013,766 RGD:6480464
G EPHX2 epoxide hydrolase 2 JBrowse link 8 27,491,143 27,597,559 RGD:6480464
G FABP4 fatty acid binding protein 4 JBrowse link 8 81,478,419 81,483,233 RGD:6480464
G HCAR3 hydroxycarboxylic acid receptor 3 JBrowse link 12 122,714,756 122,716,811 RGD:6480464
G HPGDS hematopoietic prostaglandin D synthase JBrowse link 4 94,298,535 94,342,876 RGD:6480464
G IL1B interleukin 1 beta JBrowse link 2 112,829,751 112,836,843 RGD:6480464
G IL4 interleukin 4 JBrowse link 5 132,673,986 132,682,678 RGD:6480464
G IL6 interleukin 6 JBrowse link 7 22,725,889 22,732,002 RGD:6480464
G LYPLA2 lysophospholipase 2 JBrowse link 1 23,790,789 23,795,539 RGD:6480464
G MAPK1 mitogen-activated protein kinase 1 JBrowse link 22 21,759,657 21,867,680 RGD:6480464
G MAPK3 mitogen-activated protein kinase 3 JBrowse link 16 30,114,105 30,123,309 RGD:6480464
G MYC MYC proto-oncogene, bHLH transcription factor JBrowse link 8 127,735,434 127,742,951 RGD:6480464
G PARP1 poly(ADP-ribose) polymerase 1 JBrowse link 1 226,360,691 226,408,093 RGD:6480464
G PPARG peroxisome proliferator activated receptor gamma JBrowse link 3 12,287,368 12,434,344 RGD:6480464
G PPARGC1A PPARG coactivator 1 alpha JBrowse link 4 23,792,021 24,472,905 RGD:6480464
G PPP1R12A protein phosphatase 1 regulatory subunit 12A JBrowse link 12 79,773,563 79,935,455 RGD:6480464
G PTGDR prostaglandin D2 receptor JBrowse link 14 52,267,256 52,276,724 RGD:6480464
G PTGDR2 prostaglandin D2 receptor 2 JBrowse link 11 60,850,933 60,855,950 RGD:6480464
G PTGER2 prostaglandin E receptor 2 JBrowse link 14 52,314,312 52,328,598 RGD:6480464
G PTGS2 prostaglandin-endoperoxide synthase 2 JBrowse link 1 186,671,791 186,680,423 RGD:6480464
G RORC RAR related orphan receptor C JBrowse link 1 151,806,071 151,832,451 RGD:6480464
G TAC1 tachykinin precursor 1 JBrowse link 7 97,732,086 97,740,472 RGD:6480464
G TG thyroglobulin JBrowse link 8 132,866,943 133,134,902 RGD:6480464
G TGFB1 transforming growth factor beta 1 JBrowse link 19 41,330,323 41,353,922 RGD:6480464
G TNF tumor necrosis factor JBrowse link 6 31,575,565 31,578,336 RGD:6480464
G TNFRSF11B TNF receptor superfamily member 11b JBrowse link 8 118,923,557 118,951,885 RGD:6480464
G TSHB thyroid stimulating hormone subunit beta JBrowse link 1 115,029,826 115,035,935 RGD:6480464
G UCP2 uncoupling protein 2 JBrowse link 11 73,974,671 73,983,202 RGD:6480464
prostaglandin D3 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G IL1B interleukin 1 beta JBrowse link 2 112,829,751 112,836,843 RGD:6480464
G PTGS2 prostaglandin-endoperoxide synthase 2 JBrowse link 1 186,671,791 186,680,423 RGD:6480464
prostaglandin J2 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ABCA1 ATP binding cassette subfamily A member 1 JBrowse link 9 104,781,006 104,928,232 RGD:6480464
G AKR1C3 aldo-keto reductase family 1 member C3 JBrowse link 10 5,048,766 5,107,686 RGD:6480464
G APOA1 apolipoprotein A1 JBrowse link 11 116,835,751 116,837,950 RGD:6480464
G ARHGDIB Rho GDP dissociation inhibitor beta JBrowse link 12 14,942,015 14,961,601 RGD:6480464
G CASP3 caspase 3 JBrowse link 4 184,627,696 184,649,475 RGD:6480464
G CEBPB CCAAT enhancer binding protein beta JBrowse link 20 50,190,583 50,192,690 RGD:6480464
G CES1 carboxylesterase 1 JBrowse link 16 55,802,851 55,833,127 RGD:6480464
G CRYAB crystallin alpha B JBrowse link 11 111,908,564 111,923,740 RGD:6480464
G EP300 E1A binding protein p300 JBrowse link 22 41,092,592 41,180,077 RGD:6480464
G GCLC glutamate-cysteine ligase catalytic subunit JBrowse link 6 53,497,341 53,545,101 RGD:6480464
G GCLM glutamate-cysteine ligase modifier subunit JBrowse link 1 93,885,199 93,910,370 RGD:6480464
G GDF15 growth differentiation factor 15 JBrowse link 19 18,382,170 18,389,176 RGD:6480464
G GSTA1 glutathione S-transferase alpha 1 JBrowse link 6 52,791,371 52,803,827 RGD:6480464
G GSTA2 glutathione S-transferase alpha 2 JBrowse link 6 52,750,087 52,763,475 RGD:6480464
G GSTM1 glutathione S-transferase mu 1 JBrowse link 1 109,687,817 109,693,745 RGD:6480464
G JUN Jun proto-oncogene, AP-1 transcription factor subunit JBrowse link 1 58,780,791 58,784,047 RGD:6480464
G NFE2L2 nuclear factor, erythroid 2 like 2 JBrowse link 2 177,230,303 177,265,131 RGD:6480464
G NR1H3 nuclear receptor subfamily 1 group H member 3 JBrowse link 11 47,248,300 47,269,033 RGD:6480464
G PARP1 poly(ADP-ribose) polymerase 1 JBrowse link 1 226,360,691 226,408,093 RGD:6480464
G PPARG peroxisome proliferator activated receptor gamma JBrowse link 3 12,287,368 12,434,344 RGD:6480464
G PTGDR prostaglandin D2 receptor JBrowse link 14 52,267,256 52,276,724 RGD:6480464
G RXRA retinoid X receptor alpha JBrowse link 9 134,326,455 134,440,586 RGD:6480464
G SLC2A4 solute carrier family 2 member 4 JBrowse link 17 7,281,718 7,288,257 RGD:6480464
G TG thyroglobulin JBrowse link 8 132,866,943 133,134,902 RGD:6480464
G TSHB thyroid stimulating hormone subunit beta JBrowse link 1 115,029,826 115,035,935 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 23909
    chemical entity 23872
      molecular entity 23821
        polyatomic entity 23730
          heteroatomic molecular entity 23321
            hydroxides 22145
              organic hydroxy compound 20533
                alcohol 15728
                  secondary alcohol 7479
                    prostaglandins D 142
                      13,14-dihydro-15-ketoprostaglandin D2 5
                      15-dehydro-prostaglandin D2 0
                      15-deoxy-Delta(12,14)-prostaglandin D2 0
                      prostaglandin D1 0
                      prostaglandin D2 + 142
                      prostaglandin D2 1-glyceryl ester 0
                      prostaglandin D2 2-glyceryl ester 0
                      prostaglandin D3 2
Path 2
Term Annotations click to browse term
  CHEBI ontology 23909
    subatomic particle 23860
      composite particle 23860
        hadron 23860
          baryon 23860
            nucleon 23860
              atomic nucleus 23860
                atom 23860
                  main group element atom 23681
                    p-block element atom 23681
                      carbon group element atom 23401
                        carbon atom 23358
                          organic molecular entity 23358
                            organic group 22026
                              organic divalent group 22000
                                organodiyl group 22000
                                  carbonyl group 21975
                                    carbonyl compound 21975
                                      carboxylic acid 21030
                                        monocarboxylic acid 19814
                                          fatty acid 18120
                                            fatty acid derivative 1036
                                              icosanoid 460
                                                prostanoid 399
                                                  prostaglandin 394
                                                    prostaglandins D 142
                                                      13,14-dihydro-15-ketoprostaglandin D2 5
                                                      15-dehydro-prostaglandin D2 0
                                                      15-deoxy-Delta(12,14)-prostaglandin D2 0
                                                      prostaglandin D1 0
                                                      prostaglandin D2 + 142
                                                      prostaglandin D2 1-glyceryl ester 0
                                                      prostaglandin D2 2-glyceryl ester 0
                                                      prostaglandin D3 2
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.