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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term:pentenoic acid
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Accession:CHEBI:25897 term browser browse the term
Definition:Any C5, straight-chain, monounsaturated fatty acid.
Synonyms:related_synonym: C5:1;   Formula=C5H8O2;   pentenoic acids


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pent-4-enoic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp4a1 cytochrome P450, family 4, subfamily a, polypeptide 1 increases expression EXP 4-pentenoic acid results in increased expression of CYP4A1 mRNA CTD PMID:12883083 NCBI chr 5:129,123,323...129,137,464
Ensembl chr 5:129,123,336...129,137,464 		JBrowse link
G Hprt1 hypoxanthine phosphoribosyltransferase 1 increases expression EXP 4-pentenoic acid results in increased expression of HPRT1 mRNA CTD PMID:12883083 NCBI chr  X:132,736,175...132,768,149
Ensembl chr  X:132,736,096...132,768,154 		JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit increases expression EXP 4-pentenoic acid results in increased expression of JUN mRNA CTD PMID:12883083 NCBI chr 5:109,894,175...109,897,268
Ensembl chr 5:109,893,145...109,897,656 		JBrowse link
G Rgn regucalcin decreases expression EXP 4-pentenoic acid results in decreased expression of RGN mRNA CTD PMID:12883083 NCBI chr  X:1,619,030...1,634,456
Ensembl chr  X:1,619,032...1,634,450 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19932
    chemical entity 19930
      atom 19930
        nonmetal atom 19859
          carbon atom 19812
            organic molecular entity 19812
              lipid 18000
                fatty acid 16852
                  short-chain fatty acid 15937
                    pentenoic acid 4
                      pent-2-enoic acid + 0
                      pent-3-enoic acid + 0
                      pent-4-enoic acid + 4
Path 2
Term Annotations click to browse term
  CHEBI ontology 19932
    subatomic particle 19930
      composite particle 19930
        hadron 19930
          baryon 19930
            nucleon 19930
              atomic nucleus 19930
                atom 19930
                  main group element atom 19876
                    p-block element atom 19876
                      carbon group element atom 19816
                        carbon atom 19812
                          organic molecular entity 19812
                            heteroorganic entity 19559
                              organochalcogen compound 19317
                                organooxygen compound 19231
                                  carbon oxoacid 18687
                                    carboxylic acid 18684
                                      monocarboxylic acid 18025
                                        fatty acid 16852
                                          unsaturated fatty acid 1676
                                            monounsaturated fatty acid 608
                                              pentenoic acid 4
                                                pent-2-enoic acid + 0
                                                pent-3-enoic acid + 0
                                                pent-4-enoic acid + 4
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