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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:pentenoic acid
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Accession:CHEBI:25897 term browser browse the term
Definition:Any C5, straight-chain, monounsaturated fatty acid.
Synonyms:related_synonym: C5:1;   Formula=C5H8O2;   pentenoic acids


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pent-4-enoic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp4a1 cytochrome P450, family 4, subfamily a, polypeptide 1 increases expression EXP 4-pentenoic acid results in increased expression of CYP4A1 mRNA CTD PMID:12883083 NCBI chr 5:134,492,734...134,507,158
Ensembl chr 5:134,492,756...134,507,154
JBrowse link
G Hprt1 hypoxanthine phosphoribosyltransferase 1 increases expression EXP 4-pentenoic acid results in increased expression of HPRT1 mRNA CTD PMID:12883083 NCBI chr  X:158,196,640...158,228,815
Ensembl chr  X:158,197,149...158,228,749
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit increases expression EXP 4-pentenoic acid results in increased expression of JUN mRNA CTD PMID:12883083 NCBI chr 5:114,011,184...114,014,277
Ensembl chr 5:114,011,189...114,014,277
JBrowse link
G Rgn regucalcin decreases expression EXP 4-pentenoic acid results in decreased expression of RGN mRNA CTD PMID:12883083 NCBI chr  X:1,833,484...1,848,904
Ensembl chr  X:1,833,492...1,848,904
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19816
    chemical entity 19816
      atom 19814
        nonmetal atom 19690
          carbon atom 19597
            organic molecular entity 19597
              lipid 17059
                fatty acid 15990
                  short-chain fatty acid 15674
                    pentenoic acid 4
                      pent-2-enoic acid + 0
                      pent-3-enoic acid + 0
                      pent-4-enoic acid + 4
Path 2
Term Annotations click to browse term
  CHEBI ontology 19816
    subatomic particle 19814
      composite particle 19814
        hadron 19814
          baryon 19814
            nucleon 19814
              atomic nucleus 19814
                atom 19814
                  main group element atom 19702
                    p-block element atom 19702
                      carbon group element atom 19608
                        carbon atom 19597
                          organic molecular entity 19597
                            organic group 18537
                              organic divalent group 18530
                                organodiyl group 18530
                                  carbonyl group 18436
                                    carbonyl compound 18436
                                      carboxylic acid 18114
                                        monocarboxylic acid 17476
                                          fatty acid 15990
                                            unsaturated fatty acid 923
                                              monounsaturated fatty acid 420
                                                pentenoic acid 4
                                                  pent-2-enoic acid + 0
                                                  pent-3-enoic acid + 0
                                                  pent-4-enoic acid + 4
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