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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:hydroxy-amino acid
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Accession:CHEBI:24662 term browser browse the term
Definition:A non-proteinogenic alpha-amino acid bearing one or more hydroxy groups at unspecified positions.


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3-hydroxykynurenine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kmo kynurenine 3-monooxygenase multiple interactions EXP [KMO protein results in increased hydroxylation of Kynurenine] which results in increased chemical synthesis of 3-hydroxykynurenine CTD PMID:32243540 NCBI chr13:93,684,324...93,715,378
Ensembl chr13:93,684,437...93,716,227
JBrowse link
5-hydroxytryptophan term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddc dopa decarboxylase multiple interactions EXP [DDC protein results in decreased carboxylation of 5-Hydroxytryptophan] which results in increased chemical synthesis of Serotonin CTD PMID:32243540 NCBI chr14:91,905,919...91,996,816
Ensembl chr14:91,905,919...91,996,774
JBrowse link
G Tph1 tryptophan hydroxylase 1 multiple interactions EXP [TPH1 protein results in increased hydroxylation of Tryptophan] which results in increased chemical synthesis of 5-Hydroxytryptophan CTD PMID:32243540 NCBI chr 1:102,669,868...102,699,442
Ensembl chr 1:102,669,868...102,699,442
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19773
    role 19723
      application 19413
        refrigerant 17474
          ammonia 17008
            organic amino compound 17007
              amino acid 14111
                alpha-amino acid 11596
                  non-proteinogenic alpha-amino acid 1558
                    hydroxy-amino acid 3
                      2-methylserine + 0
                      3-hydroxyaspartic acid + 0
                      3-hydroxylysine 0
                      4-hydroxy-4-methylglutamic acid 0
                      4-hydroxy-L-threonine 0
                      4-hydroxyphenylglycine + 0
                      N-hydroxy-alpha-amino-acid + 0
                      alpha-hydroxyglycine + 0
                      hydroxy-L-arginine + 0
                      hydroxy-L-glutamic acid + 0
                      hydroxy-L-isoleucine + 0
                      hydroxy-L-lysine + 0
                      hydroxy-L-valine + 0
                      hydroxyarginine + 0
                      hydroxykynurenine + 1
                      hydroxylysine + 0
                      hydroxyphenylalanine + 0
                      hydroxyproline + 0
                      hydroxytryptophan + 2
                      monohydroxyproline + 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19773
    subatomic particle 19771
      composite particle 19771
        hadron 19771
          baryon 19771
            nucleon 19771
              atomic nucleus 19771
                atom 19771
                  main group element atom 19665
                    p-block element atom 19665
                      carbon group element atom 19583
                        carbon atom 19573
                          organic molecular entity 19573
                            organic group 18603
                              organic divalent group 18594
                                organodiyl group 18594
                                  carbonyl group 18507
                                    carbonyl compound 18507
                                      carboxylic acid 18159
                                        amino acid 14111
                                          alpha-amino acid 11596
                                            non-proteinogenic alpha-amino acid 1558
                                              hydroxy-amino acid 3
                                                2-methylserine + 0
                                                3-hydroxyaspartic acid + 0
                                                3-hydroxylysine 0
                                                4-hydroxy-4-methylglutamic acid 0
                                                4-hydroxy-L-threonine 0
                                                4-hydroxyphenylglycine + 0
                                                N-hydroxy-alpha-amino-acid + 0
                                                alpha-hydroxyglycine + 0
                                                hydroxy-L-arginine + 0
                                                hydroxy-L-glutamic acid + 0
                                                hydroxy-L-isoleucine + 0
                                                hydroxy-L-lysine + 0
                                                hydroxy-L-valine + 0
                                                hydroxyarginine + 0
                                                hydroxykynurenine + 1
                                                hydroxylysine + 0
                                                hydroxyphenylalanine + 0
                                                hydroxyproline + 0
                                                hydroxytryptophan + 2
                                                monohydroxyproline + 0
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