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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:farnesal
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Accession:CHEBI:24012 term browser browse the term
Definition:A farnesane sesquiterpenoid that has formula C15H24O.
Synonyms:exact_synonym: 3,7,11-trimethyldodeca-2,6,10-trienal
 related_synonym: 3,7,11-trimethyl-2,6,10-dodecatrienal;   Formula=C15H24O;   InChI=1S/C15H24O/c1-13(2)7-5-8-14(3)9-6-10-15(4)11-12-16/h7,9,11-12H,5-6,8,10H2,1-4H3;   InChIKey=YHRUHBBTQZKMEX-UHFFFAOYSA-N;   SMILES=[H]C(=O)C=C(C)CCC=C(C)CCC=C(C)C
 xref: Beilstein:1723427;   CAS:19317-11-4;   Gmelin:1784234;   KEGG:C16501;   KNApSAcK:C00030246
 xref_mesh: MESH:C084519


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farnesal term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1b10 aldo-keto reductase family 1 member B10 increases reduction ISO AKR1B10 protein results in increased reduction of farnesal CTD PMID:21187079 NCBI chr 4:61,813,265...61,830,371
Ensembl chr 4:61,771,970...61,828,657
JBrowse link
G Akr1c2 aldo-keto reductase family 1, member C2 increases expression ISO farnesal results in increased expression of AKR1C2 mRNA CTD PMID:20491607 NCBI chr17:69,388,337...69,435,160
Ensembl chr17:69,388,335...69,404,341
JBrowse link
G Akr1c3 aldo-keto reductase family 1, member C3 increases reduction ISO AKR1C3 protein results in increased reduction of farnesal CTD PMID:21187079 NCBI chr17:69,761,126...69,778,021
Ensembl chr17:69,761,118...69,778,021
JBrowse link
G Gclc glutamate-cysteine ligase, catalytic subunit increases expression ISO farnesal results in increased expression of GCLC mRNA CTD PMID:20491607 NCBI chr 8:85,059,051...85,097,471
Ensembl chr 8:85,059,051...85,097,468
JBrowse link
G Mt2A metallothionein 2A increases expression ISO farnesal results in increased expression of MT2A mRNA CTD PMID:20491607 NCBI chr19:11,307,966...11,308,740
Ensembl chr19:11,307,967...11,308,740
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19770
    chemical entity 19769
      atom 19768
        nonmetal atom 19642
          carbon atom 19539
            organic molecular entity 19539
              olefinic compound 14449
                enal 1295
                  farnesal 5
                    (2-cis,6-trans)-farnesal 0
                    (2-trans,6-trans)-farnesal 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19770
    subatomic particle 19768
      composite particle 19768
        hadron 19768
          baryon 19768
            nucleon 19768
              atomic nucleus 19768
                atom 19768
                  main group element atom 19655
                    p-block element atom 19655
                      carbon group element atom 19550
                        carbon atom 19539
                          organic molecular entity 19539
                            organic group 18488
                              organic divalent group 18481
                                organodiyl group 18481
                                  carbonyl group 18384
                                    carbonyl compound 18384
                                      carboxylic acid 18054
                                        carboacyl group 17334
                                          univalent carboacyl group 17334
                                            formyl group 7840
                                              aldehyde 7840
                                                alpha,beta-unsaturated aldehyde 1295
                                                  enal 1295
                                                    farnesal 5
                                                      (2-cis,6-trans)-farnesal 0
                                                      (2-trans,6-trans)-farnesal 0
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