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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:deoxyribonucleoside
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Accession:CHEBI:23636 term browser browse the term
Synonyms:related_synonym: deoxyribonucleosides


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5-aza-2'-deoxycytidine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNMT1 DNA methyltransferase 1 multiple interactions EXP Decitabine inhibits the reaction [ochratoxin A results in increased expression of DNMT1 mRNA]; Decitabine inhibits the reaction [ochratoxin A results in increased expression of DNMT1 protein] CTD PMID:29080797 PMID:30923867 NCBI chr 2:68,981,564...69,040,364
Ensembl chr 2:68,981,564...69,029,919
JBrowse link
G JAK2 Janus kinase 2 multiple interactions
decreases phosphorylation
EXP Decitabine inhibits the reaction [ochratoxin A results in increased phosphorylation of JAK2 protein]
Decitabine results in decreased phosphorylation of JAK2 protein
CTD PMID:30923867 NCBI chr 1:216,849,744...217,002,310
Ensembl chr 1:216,848,686...217,002,148
JBrowse link
G LOC100522201 histone H2AX multiple interactions EXP Decitabine inhibits the reaction [ochratoxin A results in increased expression of H2AX protein] CTD PMID:30923867 NCBI chr 9:46,308,824...46,310,494
Ensembl chr 9:46,309,653...46,310,084
JBrowse link
G NEIL1 nei like DNA glycosylase 1 multiple interactions
increases expression
EXP Decitabine inhibits the reaction [ochratoxin A results in decreased expression of NEIL1 mRNA]
Decitabine results in increased expression of NEIL1 mRNA
CTD PMID:30923867 NCBI chr 7:58,261,761...58,269,001
Ensembl chr 7:58,261,761...58,283,092
JBrowse link
G NEIL3 nei like DNA glycosylase 3 multiple interactions
increases expression
EXP Decitabine inhibits the reaction [ochratoxin A results in decreased expression of NEIL3 mRNA]
Decitabine results in increased expression of NEIL3 mRNA
CTD PMID:30923867 NCBI chr15:39,416,073...39,632,313
Ensembl chr15:39,581,856...39,632,310
JBrowse link
G OGG1 8-oxoguanine DNA glycosylase increases expression
multiple interactions
EXP Decitabine results in increased expression of OGG1 mRNA
Decitabine inhibits the reaction [ochratoxin A results in decreased expression of OGG1 mRNA]
CTD PMID:30923867 NCBI chr13:66,038,669...66,045,478 JBrowse link
G SOCS3 suppressor of cytokine signaling 3 multiple interactions EXP Decitabine promotes the reaction [ochratoxin A results in increased expression of SOCS3 mRNA]; Decitabine promotes the reaction [ochratoxin A results in increased expression of SOCS3 protein] CTD PMID:30923867 NCBI chr12:3,643,832...3,647,015
Ensembl chr12:3,643,929...3,647,012
JBrowse link
G STAT3 signal transducer and activator of transcription 3 multiple interactions EXP Decitabine inhibits the reaction [ochratoxin A results in increased phosphorylation of STAT3 protein] CTD PMID:30923867 NCBI chr12:20,407,316...20,471,091
Ensembl chr12:20,407,233...20,472,993
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 880
    chemical entity 880
      atom 865
        nonmetal atom 845
          nitrogen atom 331
            nitrogen molecular entity 331
              nucleobase-containing molecular entity 27
                nucleoside 27
                  deoxyribonucleoside 8
                    (2S,3R,5S)-5-(6-aminopurin-9-yl)-2-methyl-3-oxolanol 0
                    (3R)-5-(6-aminopurin-9-yl)-2-methyl-3-oxolanol 0
                    2',3'-dideoxyribonucleoside + 0
                    2'-deoxyribonucleoside + 8
                    2'-deoxytubercidin 0
                    3'-deoxyribonucleoside + 0
                    5'-deoxyribonucleoside + 0
                    5-(6-aminopurin-9-yl)-2-methyl-3-oxolanol 0
                    purine deoxyribonucleoside + 0
                    pyrimidine deoxyribonucleoside + 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 880
    subatomic particle 865
      composite particle 865
        hadron 865
          baryon 865
            nucleon 865
              atomic nucleus 865
                atom 865
                  main group element atom 855
                    p-block element atom 852
                      carbon group element atom 828
                        carbon atom 827
                          organic molecular entity 827
                            heteroorganic entity 579
                              organochalcogen compound 525
                                organooxygen compound 460
                                  carbohydrates and carbohydrate derivatives 113
                                    carbohydrate 113
                                      carbohydrate derivative 102
                                        glycosyl compound 40
                                          N-glycosyl compound 27
                                            nucleoside 27
                                              deoxyribonucleoside 8
                                                (2S,3R,5S)-5-(6-aminopurin-9-yl)-2-methyl-3-oxolanol 0
                                                (3R)-5-(6-aminopurin-9-yl)-2-methyl-3-oxolanol 0
                                                2',3'-dideoxyribonucleoside + 0
                                                2'-deoxyribonucleoside + 8
                                                2'-deoxytubercidin 0
                                                3'-deoxyribonucleoside + 0
                                                5'-deoxyribonucleoside + 0
                                                5-(6-aminopurin-9-yl)-2-methyl-3-oxolanol 0
                                                purine deoxyribonucleoside + 0
                                                pyrimidine deoxyribonucleoside + 0
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