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ONTOLOGY REPORT - ANNOTATIONS


Term:cytidine 5'-phosphate
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Accession:CHEBI:23521 term browser browse the term
Synonyms:related_synonym: cytidine 5'-phosphates


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CDP-choline term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Casp3 caspase 3 JBrowse link 8 46,617,291 46,639,698 RGD:6480464
G Icam1 intercellular adhesion molecule 1 JBrowse link 9 21,015,940 21,028,814 RGD:6480464
G Nceh1 neutral cholesterol ester hydrolase 1 JBrowse link 3 27,183,004 27,245,266 RGD:6480464
G Parp1 poly (ADP-ribose) polymerase family, member 1 JBrowse link 1 180,568,891 180,600,999 RGD:6480464
G Sirt1 sirtuin 1 JBrowse link 10 63,319,005 63,339,035 RGD:6480464
CMP-N-acetyl-beta-neuraminic acid term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cmas cytidine monophospho-N-acetylneuraminic acid synthetase JBrowse link 6 142,756,686 142,775,714 RGD:6480464
CTP term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ahr aryl-hydrocarbon receptor JBrowse link 12 35,497,979 35,534,989 RGD:6480464
G App amyloid beta (A4) precursor protein JBrowse link 16 84,952,666 85,175,255 RGD:6480464
cytidine 5'-monophosphate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cdipt CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase) JBrowse link 7 126,975,914 126,980,501 RGD:6480464
poly(cytidylic acid) term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gria1 glutamate receptor, ionotropic, AMPA1 (alpha 1) JBrowse link 11 57,011,571 57,330,244 RGD:6480464
G Grin2a glutamate receptor, ionotropic, NMDA2A (epsilon 1) JBrowse link 16 9,567,901 9,996,083 RGD:6480464
G Grin2c glutamate receptor, ionotropic, NMDA2C (epsilon 3) JBrowse link 11 115,249,169 115,267,297 RGD:6480464
G Il1b interleukin 1 beta JBrowse link 2 129,364,569 129,371,164 RGD:6480464
poly(I:C) term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ahr aryl-hydrocarbon receptor JBrowse link 12 35,497,979 35,534,989 RGD:6480464
G Appl1 adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1 JBrowse link 14 26,918,986 26,970,611 RGD:6480464
G Atf3 activating transcription factor 3 JBrowse link 1 191,170,296 191,183,333 RGD:6480464
G Bax BCL2-associated X protein JBrowse link 7 45,461,695 45,466,903 RGD:6480464
G Bcl2 B cell leukemia/lymphoma 2 JBrowse link 1 106,538,176 106,714,290 RGD:6480464
G Bdnf brain derived neurotrophic factor JBrowse link 2 109,674,700 109,727,043 RGD:6480464
G Bid BH3 interacting domain death agonist JBrowse link 6 120,893,119 120,917,062 RGD:6480464
G Birc5 baculoviral IAP repeat-containing 5 JBrowse link 11 117,849,237 117,855,743 RGD:6480464
G Casp3 caspase 3 JBrowse link 8 46,617,291 46,639,698 RGD:6480464
G Casp8 caspase 8 JBrowse link 1 58,795,233 58,847,503 RGD:6480464
G Casp9 caspase 9 JBrowse link 4 141,793,612 141,815,978 RGD:6480464
G Cat catalase JBrowse link 2 103,453,904 103,485,153 RGD:6480464
G Ccl1 chemokine (C-C motif) ligand 1 JBrowse link 11 82,176,666 82,179,812 RGD:6480464
G Ccl11 chemokine (C-C motif) ligand 11 JBrowse link 11 82,057,832 82,062,955 RGD:6480464
G Ccl2 chemokine (C-C motif) ligand 2 JBrowse link 11 82,035,577 82,037,452 RGD:6480464
G Ccl3 chemokine (C-C motif) ligand 3 JBrowse link 11 83,647,843 83,649,378 RGD:6480464
G Ccl4 chemokine (C-C motif) ligand 4 JBrowse link 11 83,648,624 83,664,683 RGD:6480464
G Ccl5 chemokine (C-C motif) ligand 5 JBrowse link 11 83,525,778 83,530,518 RGD:6480464
G Cd40 CD40 antigen JBrowse link 2 165,055,614 165,071,654 RGD:6480464
G Cd80 CD80 antigen JBrowse link 16 38,457,430 38,495,958 RGD:6480464
G Cd83 CD83 antigen JBrowse link 13 43,785,112 43,803,133 RGD:6480464
G Cd86 CD86 antigen JBrowse link 16 36,568,956 36,666,158 RGD:6480464
G Cdx2 caudal type homeobox 2 JBrowse link 5 147,300,900 147,307,249 RGD:6480464
G Cnr2 cannabinoid receptor 2 (macrophage) JBrowse link 4 135,895,189 135,920,219 RGD:6480464
G Csf2 colony stimulating factor 2 (granulocyte-macrophage) JBrowse link 11 54,247,270 54,249,899 RGD:6480464
G Cxcl1 chemokine (C-X-C motif) ligand 1 JBrowse link 5 90,891,245 90,893,121 RGD:6480464
G Cxcl10 chemokine (C-X-C motif) ligand 10 JBrowse link 5 92,346,638 92,348,889 RGD:6480464
G Cxcl15 chemokine (C-X-C motif) ligand 15 JBrowse link 5 90,794,534 90,803,067 RGD:6480464
G Cxcl2 chemokine (C-X-C motif) ligand 2 JBrowse link 5 90,903,899 90,905,938 RGD:6480464
G Cxcl3 chemokine (C-X-C motif) ligand 3 JBrowse link 5 90,786,101 90,788,093 RGD:6480464
G Cxcl9 chemokine (C-X-C motif) ligand 9 JBrowse link 5 92,321,331 92,328,079 RGD:6480464
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 JBrowse link 9 57,687,928 57,703,824 RGD:6480464
G Cyp2c38 cytochrome P450, family 2, subfamily c, polypeptide 38 JBrowse link 19 39,389,556 39,463,103 RGD:6480464
G Cyp2c52-ps cytochrome P450, family 2, subfamily c, polypeptide 52, pseudogene JBrowse link 19 38,976,662 39,003,627 RGD:6480464
G Ddx58 DEAD/H box helicase 58 JBrowse link 4 40,203,777 40,239,825 RGD:6480464
G Defb4 defensin beta 4 JBrowse link 8 19,198,704 19,201,547 RGD:6480464
G Dnm2 dynamin 2 JBrowse link 9 21,424,908 21,507,759 RGD:6480464
G Egr1 early growth response 1 JBrowse link 18 34,861,207 34,864,956 RGD:6480464
G Eif2ak2 eukaryotic translation initiation factor 2-alpha kinase 2 JBrowse link 17 78,850,504 78,882,572 RGD:6480464
G F11r F11 receptor JBrowse link 1 171,437,561 171,464,593 RGD:6480464
G Fabp4 fatty acid binding protein 4, adipocyte JBrowse link 3 10,204,342 10,208,616 RGD:6480464
G Fmr1 FMRP translational regulator 1 JBrowse link X 68,678,536 68,717,963 RGD:6480464
G Gfap glial fibrillary acidic protein JBrowse link 11 102,887,336 102,897,200 RGD:6480464
G Gh growth hormone JBrowse link 11 106,300,261 106,303,703 RGD:6480464
G Gsr glutathione reductase JBrowse link 8 33,653,238 33,698,162 RGD:6480464
G Gzmb granzyme B JBrowse link 14 56,258,836 56,262,334 RGD:6480464
G Hmox1 heme oxygenase 1 JBrowse link 8 75,093,618 75,100,593 RGD:6480464
G Hsp90aa1 heat shock protein 90, alpha (cytosolic), class A member 1 JBrowse link 12 110,691,036 110,696,395 RGD:6480464
G Hspa1a heat shock protein 1A JBrowse link 17 34,969,359 34,972,156 RGD:6480464
G Hspa8 heat shock protein 8 JBrowse link 9 40,801,276 40,805,202 RGD:6480464
G Htr2a 5-hydroxytryptamine (serotonin) receptor 2A JBrowse link 14 74,640,874 74,706,859 RGD:6480464
G Ido1 indoleamine 2,3-dioxygenase 1 JBrowse link 8 24,584,133 24,596,952 RGD:6480464
G Ido2 indoleamine 2,3-dioxygenase 2 JBrowse link 8 24,531,892 24,576,414 RGD:6480464
G Ifih1 interferon induced with helicase C domain 1 JBrowse link 2 62,595,618 62,646,255 RGD:6480464
G Ifit1bl1 interferon induced protein with tetratricpeptide repeats 1B like 1 JBrowse link 19 34,592,888 34,662,981 RGD:6480464
G Ifnb1 interferon beta 1, fibroblast JBrowse link 4 88,522,025 88,522,794 RGD:6480464
G Ifng interferon gamma JBrowse link 10 118,441,046 118,445,894 RGD:6480464
G Igf1 insulin-like growth factor 1 JBrowse link 10 87,858,265 87,937,047 RGD:6480464
G Igfbp3 insulin-like growth factor binding protein 3 JBrowse link 11 7,206,086 7,215,498 RGD:6480464
G Ikbke inhibitor of kappaB kinase epsilon JBrowse link 1 131,254,600 131,279,601 RGD:6480464
G Il10 interleukin 10 JBrowse link 1 131,019,845 131,024,970 RGD:6480464
G Il12a interleukin 12a JBrowse link 3 68,690,644 68,698,550 RGD:6480464
G Il12b interleukin 12b JBrowse link 11 44,400,063 44,414,677 RGD:6480464
G Il17a interleukin 17A JBrowse link 1 20,730,905 20,734,496 RGD:6480464
G Il1b interleukin 1 beta JBrowse link 2 129,364,569 129,371,164 RGD:6480464
G Il2 interleukin 2 JBrowse link 3 37,120,713 37,125,954 RGD:6480464
G Il27 interleukin 27 JBrowse link 7 126,589,009 126,595,035 RGD:6480464
G Il33 interleukin 33 JBrowse link 19 29,925,113 29,960,718 RGD:6480464
G Il4 interleukin 4 JBrowse link 11 53,612,460 53,618,665 RGD:6480464
G Il6 interleukin 6 JBrowse link 5 30,013,114 30,019,975 RGD:6480464
G Irf3 interferon regulatory factor 3 JBrowse link 7 44,997,648 45,002,848 RGD:6480464
G Irf7 interferon regulatory factor 7 JBrowse link 7 141,263,183 141,266,499 RGD:6480464
G Irf9 interferon regulatory factor 9 JBrowse link 14 55,603,985 55,610,030 RGD:6480464
G Isg15 ISG15 ubiquitin-like modifier JBrowse link 4 156,199,424 156,200,818 RGD:6480464
G Itgam integrin alpha M JBrowse link 7 128,062,640 128,118,491 RGD:6480464
G Klf4 Kruppel-like factor 4 (gut) JBrowse link 4 55,527,137 55,532,475 RGD:6480464
G Klrk1 killer cell lectin-like receptor subfamily K, member 1 JBrowse link 6 129,610,323 129,623,903 RGD:6480464
G Map3k11 mitogen-activated protein kinase kinase kinase 11 JBrowse link 19 5,688,411 5,702,865 RGD:6480464
G Mapk1 mitogen-activated protein kinase 1 JBrowse link 16 16,983,382 17,047,453 RGD:6480464
G Mapk3 mitogen-activated protein kinase 3 JBrowse link 7 126,759,626 126,765,816 RGD:6480464
G Mir155 microRNA 155 JBrowse link 16 84,714,140 84,714,204 RGD:6480464
G Mir26a-1 microRNA 26a-1 JBrowse link 9 119,031,796 119,031,885 RGD:6480464
G Msi1 musashi RNA-binding protein 1 JBrowse link 5 115,359,059 115,455,560 RGD:6480464
G Mx2 MX dynamin-like GTPase 2 JBrowse link 16 97,536,081 97,560,901 RGD:6480464
G Myc myelocytomatosis oncogene JBrowse link 15 61,985,341 61,990,361 RGD:6480464
G Myd88 myeloid differentiation primary response gene 88 JBrowse link 9 119,335,934 119,340,018 RGD:6480464
G Nfkbia nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, alpha JBrowse link 12 55,489,409 55,492,647 RGD:6480464
G Nos2 nitric oxide synthase 2, inducible JBrowse link 11 78,920,787 78,960,226 RGD:6480464
G Oas1g 2'-5' oligoadenylate synthetase 1G JBrowse link 5 120,876,142 120,887,613 RGD:6480464
G Oas2 2'-5' oligoadenylate synthetase 2 JBrowse link 5 120,730,333 120,749,886 RGD:6480464
G P2rx7 purinergic receptor P2X, ligand-gated ion channel, 7 JBrowse link 5 122,643,927 122,692,336 RGD:6480464
G P2ry2 purinergic receptor P2Y, G-protein coupled 2 JBrowse link 7 100,996,568 101,012,053 RGD:6480464
G Plcb1 phospholipase C, beta 1 JBrowse link 2 134,786,164 135,475,258 RGD:6480464
G Pou5f1 POU domain, class 5, transcription factor 1 JBrowse link 17 35,506,032 35,510,777 RGD:6480464
G Prf1 perforin 1 (pore forming protein) JBrowse link 10 61,297,751 61,304,684 RGD:6480464
G Prl2b1 prolactin family 2, subfamily b, member 1 JBrowse link 13 27,383,345 27,390,846 RGD:6480464
G Ptgs2 prostaglandin-endoperoxide synthase 2 JBrowse link 1 150,100,031 150,108,234 RGD:6480464
G Rela v-rel reticuloendotheliosis viral oncogene homolog A (avian) JBrowse link 19 5,637,442 5,648,134 RGD:6480464
G Rgs4 regulator of G-protein signaling 4 JBrowse link 1 169,741,477 169,747,642 RGD:6480464
G Serpine1 serine (or cysteine) peptidase inhibitor, clade E, member 1 JBrowse link 5 137,061,504 137,072,272 RGD:6480464
G Sesn2 sestrin 2 JBrowse link 4 132,492,804 132,510,456 RGD:6480464
G Socs1 suppressor of cytokine signaling 1 JBrowse link 16 10,783,808 10,785,536 RGD:6480464
G Socs3 suppressor of cytokine signaling 3 JBrowse link 11 117,966,079 117,970,336 RGD:6480464
G Sod2 superoxide dismutase 2, mitochondrial JBrowse link 17 13,007,839 13,018,119 RGD:6480464
G Sox2 SRY (sex determining region Y)-box 2 JBrowse link 3 34,649,995 34,652,461 RGD:6480464
G Stat1 signal transducer and activator of transcription 1 JBrowse link 1 52,119,438 52,161,865 RGD:6480464
G Stat2 signal transducer and activator of transcription 2 JBrowse link 10 128,270,498 128,292,853 RGD:6480464
G Stat3 signal transducer and activator of transcription 3 JBrowse link 11 100,886,806 100,939,594 RGD:6480464
G Tbk1 TANK-binding kinase 1 JBrowse link 10 121,546,455 121,586,794 RGD:6480464
G Ticam1 toll-like receptor adaptor molecule 1 JBrowse link 17 56,269,462 56,276,767 RGD:6480464
G Timp1 tissue inhibitor of metalloproteinase 1 JBrowse link X 20,870,166 20,874,737 RGD:6480464
G Tlr2 toll-like receptor 2 JBrowse link 3 83,836,272 83,841,824 RGD:6480464
G Tlr3 toll-like receptor 3 JBrowse link 8 45,395,665 45,411,075 RGD:6480464
G Tlr7 toll-like receptor 7 JBrowse link X 167,303,380 167,330,574 RGD:6480464
G Tmprss2 transmembrane protease, serine 2 JBrowse link 16 97,564,682 97,659,541 RGD:6480464
G Tnf tumor necrosis factor JBrowse link 17 35,199,367 35,202,007 RGD:6480464
G Tnfsf10 tumor necrosis factor (ligand) superfamily, member 10 JBrowse link 3 27,317,077 27,339,665 RGD:6480464
G Traf6 TNF receptor-associated factor 6 JBrowse link 2 101,678,420 101,701,668 RGD:6480464
G Trp53 transformation related protein 53 JBrowse link 11 69,580,348 69,591,873 RGD:6480464
G Tslp thymic stromal lymphopoietin JBrowse link 18 32,815,383 32,819,799 RGD:6480464
G Txn1 thioredoxin 1 JBrowse link 4 57,943,373 57,956,411 RGD:6480464
G Ugt2b1 UDP glucuronosyltransferase 2 family, polypeptide B1 JBrowse link 5 86,916,639 86,926,503 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 21260
    role 21244
      application 20679
        solvent 17380
          phosphoric acid 7811
            phosphoric acid derivative 7471
              organic phosphate 7470
                nucleoside phosphate 1515
                  cytidine phosphate 132
                    cytidine 5'-phosphate 132
                      5'-O-\{(S)-hydroxy[(3-\{[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]amino\}propanoyl)oxy]phosphoryl\}cytidine 0
                      CDP + 5
                      CMP-5'-phosphonoformic acid 0
                      CTP + 2
                      cytidine 5'-monophosphate + 127
                      cytidine 5'-phosphate 2',3'-cyclic phosphate 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 21260
    subatomic particle 21256
      composite particle 21256
        hadron 21256
          baryon 21256
            nucleon 21256
              atomic nucleus 21256
                atom 21256
                  main group element atom 21122
                    p-block element atom 21122
                      chalcogen 20163
                        oxygen atom 20151
                          oxygen molecular entity 20151
                            hydroxides 19763
                              oxoacid 19098
                                pnictogen oxoacid 10171
                                  phosphorus oxoacid 9042
                                    phosphoric acids 7811
                                      phosphoric acid 7811
                                        phosphoric acid derivative 7471
                                          phosphate 7471
                                            organic phosphate 7470
                                              nucleoside phosphate 1515
                                                cytidine phosphate 132
                                                  cytidine 5'-phosphate 132
                                                    5'-O-\{(S)-hydroxy[(3-\{[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]amino\}propanoyl)oxy]phosphoryl\}cytidine 0
                                                    CDP + 5
                                                    CMP-5'-phosphonoformic acid 0
                                                    CTP + 2
                                                    cytidine 5'-monophosphate + 127
                                                    cytidine 5'-phosphate 2',3'-cyclic phosphate 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.