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ONTOLOGY REPORT - ANNOTATIONS


Term:cytidine 5'-phosphate
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Accession:CHEBI:23521 term browser browse the term
Synonyms:related_synonym: cytidine 5'-phosphates


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CDP-choline term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CASP3 caspase 3 JBrowse link 4 184,627,696 184,649,475 RGD:6480464
G ICAM1 intercellular adhesion molecule 1 JBrowse link 19 10,271,120 10,286,615 RGD:6480464
G NCEH1 neutral cholesterol ester hydrolase 1 JBrowse link 3 172,630,249 172,711,067 RGD:6480464
G PARP1 poly(ADP-ribose) polymerase 1 JBrowse link 1 226,360,691 226,408,093 RGD:6480464
G SIRT1 sirtuin 1 JBrowse link 10 67,884,656 67,918,390 RGD:6480464
CMP-N-acetyl-beta-neuraminic acid term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CMAS cytidine monophosphate N-acetylneuraminic acid synthetase JBrowse link 12 22,046,174 22,065,674 RGD:6480464
CTP term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AHR aryl hydrocarbon receptor JBrowse link 7 17,298,652 17,346,147 RGD:6480464
G APP amyloid beta precursor protein JBrowse link 21 25,880,550 26,171,128 RGD:6480464
cytidine 5'-monophosphate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CDIPT CDP-diacylglycerol--inositol 3-phosphatidyltransferase JBrowse link 16 29,858,357 29,863,226 RGD:6480464
poly(cytidylic acid) term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G GRIA1 glutamate ionotropic receptor AMPA type subunit 1 JBrowse link 5 153,490,524 153,813,873 RGD:6480464
G GRIN2A glutamate ionotropic receptor NMDA type subunit 2A JBrowse link 16 9,753,404 10,182,928 RGD:6480464
G GRIN2C glutamate ionotropic receptor NMDA type subunit 2C JBrowse link 17 74,842,021 74,860,843 RGD:6480464
G IL1B interleukin 1 beta JBrowse link 2 112,829,751 112,836,843 RGD:6480464
poly(I:C) term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AHR aryl hydrocarbon receptor JBrowse link 7 17,298,652 17,346,147 RGD:6480464
G APPL1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 JBrowse link 3 57,227,729 57,273,471 RGD:6480464
G ATF3 activating transcription factor 3 JBrowse link 1 212,565,334 212,620,777 RGD:6480464
G BAX BCL2 associated X, apoptosis regulator JBrowse link 19 48,954,825 48,961,798 RGD:6480464
G BCL2 BCL2 apoptosis regulator JBrowse link 18 63,123,346 63,320,280 RGD:6480464
G BDNF brain derived neurotrophic factor JBrowse link 11 27,654,893 27,722,030 RGD:6480464
G BID BH3 interacting domain death agonist JBrowse link 22 17,734,138 17,774,665 RGD:6480464
G BIRC5 baculoviral IAP repeat containing 5 JBrowse link 17 78,214,253 78,225,635 RGD:6480464
G CASP3 caspase 3 JBrowse link 4 184,627,696 184,649,475 RGD:6480464
G CASP8 caspase 8 JBrowse link 2 201,233,443 201,287,711 RGD:6480464
G CASP9 caspase 9 JBrowse link 1 15,491,401 15,524,912 RGD:6480464
G CAT catalase JBrowse link 11 34,438,934 34,472,060 RGD:6480464
G CCL1 C-C motif chemokine ligand 1 JBrowse link 17 34,360,328 34,363,233 RGD:6480464
G CCL11 C-C motif chemokine ligand 11 JBrowse link 17 34,285,742 34,288,334 RGD:6480464
G CCL2 C-C motif chemokine ligand 2 JBrowse link 17 34,255,285 34,257,203 RGD:6480464
G CCL3 C-C motif chemokine ligand 3 JBrowse link 17 36,088,256 36,090,143 RGD:6480464
G CCL4 C-C motif chemokine ligand 4 JBrowse link 17 36,103,827 36,105,614 RGD:6480464
G CCL5 C-C motif chemokine ligand 5 JBrowse link 17 35,871,491 35,880,360 RGD:6480464
G CD40 CD40 molecule JBrowse link 20 46,118,242 46,129,858 RGD:6480464
G CD80 CD80 molecule JBrowse link 3 119,524,293 119,559,614 RGD:6480464
G CD83 CD83 molecule JBrowse link 6 14,117,256 14,136,918 RGD:6480464
G CD86 CD86 molecule JBrowse link 3 122,055,362 122,121,143 RGD:6480464
G CDX2 caudal type homeobox 2 JBrowse link 13 27,960,918 27,969,368 RGD:6480464
G CNR2 cannabinoid receptor 2 JBrowse link 1 23,870,515 23,913,362 RGD:6480464
G CSF2 colony stimulating factor 2 JBrowse link 5 132,073,789 132,076,170 RGD:6480464
G CXCL1 C-X-C motif chemokine ligand 1 JBrowse link 4 73,869,393 73,871,308 RGD:6480464
G CXCL10 C-X-C motif chemokine ligand 10 JBrowse link 4 76,021,118 76,023,497 RGD:6480464
G CXCL2 C-X-C motif chemokine ligand 2 JBrowse link 4 74,097,040 74,099,195 RGD:6480464
G CXCL8 C-X-C motif chemokine ligand 8 JBrowse link 4 73,740,569 73,743,716 RGD:6480464
G CXCL9 C-X-C motif chemokine ligand 9 JBrowse link 4 76,001,275 76,007,509 RGD:6480464
G CYP1A1 cytochrome P450 family 1 subfamily A member 1 JBrowse link 15 74,719,542 74,725,528 RGD:6480464
G CYP2C19 cytochrome P450 family 2 subfamily C member 19 JBrowse link 10 94,762,681 94,855,547 RGD:6480464
G DDX58 DExD/H-box helicase 58 JBrowse link 9 32,455,302 32,526,196 RGD:6480464
G DEFB4A defensin beta 4A JBrowse link 8 7,894,677 7,896,716 RGD:6480464
G DNM2 dynamin 2 JBrowse link 19 10,718,053 10,831,910 RGD:6480464
G EGR1 early growth response 1 JBrowse link 5 138,465,479 138,469,303 RGD:6480464
G EIF2AK2 eukaryotic translation initiation factor 2 alpha kinase 2 JBrowse link 2 37,099,210 37,157,065 RGD:6480464
G F11R F11 receptor JBrowse link 1 160,995,211 161,021,152 RGD:6480464
G FABP4 fatty acid binding protein 4 JBrowse link 8 81,478,419 81,483,233 RGD:6480464
G FMR1 FMRP translational regulator 1 JBrowse link X 147,911,919 147,951,127 RGD:6480464
G GFAP glial fibrillary acidic protein JBrowse link 17 44,903,159 44,915,552 RGD:6480464
G GH1 growth hormone 1 JBrowse link 17 63,917,203 63,918,839 RGD:6480464
G GSR glutathione-disulfide reductase JBrowse link 8 30,678,061 30,727,999 RGD:6480464
G GZMB granzyme B JBrowse link 14 24,630,954 24,634,190 RGD:6480464
G HMOX1 heme oxygenase 1 JBrowse link 22 35,381,096 35,394,207 RGD:6480464
G HSP90AA1 heat shock protein 90 alpha family class A member 1 JBrowse link 14 102,080,742 102,139,749 RGD:6480464
G HSPA1A heat shock protein family A (Hsp70) member 1A JBrowse link 6 31,815,543 31,817,942 RGD:6480464
G HSPA8 heat shock protein family A (Hsp70) member 8 JBrowse link 11 123,057,489 123,062,366 RGD:6480464
G HTR2A 5-hydroxytryptamine receptor 2A JBrowse link 13 46,831,542 46,897,076 RGD:6480464
G IDO1 indoleamine 2,3-dioxygenase 1 JBrowse link 8 39,913,891 39,928,790 RGD:6480464
G IDO2 indoleamine 2,3-dioxygenase 2 JBrowse link 8 39,934,955 40,016,391 RGD:6480464
G IFIH1 interferon induced with helicase C domain 1 JBrowse link 2 162,267,074 162,318,684 RGD:6480464
G IFIT1 interferon induced protein with tetratricopeptide repeats 1 JBrowse link 10 89,392,546 89,406,487 RGD:6480464
G IFNB1 interferon beta 1 JBrowse link 9 21,077,104 21,077,942 RGD:6480464
G IFNG interferon gamma JBrowse link 12 68,154,768 68,159,740 RGD:6480464
G IGF1 insulin like growth factor 1 JBrowse link 12 102,395,860 102,481,839 RGD:6480464
G IGFBP3 insulin like growth factor binding protein 3 JBrowse link 7 45,912,245 45,921,272 RGD:6480464
G IKBKE inhibitor of nuclear factor kappa B kinase subunit epsilon JBrowse link 1 206,470,243 206,496,890 RGD:6480464
G IL10 interleukin 10 JBrowse link 1 206,767,602 206,772,494 RGD:6480464
G IL12A interleukin 12A JBrowse link 3 159,988,835 159,996,019 RGD:6480464
G IL12B interleukin 12B JBrowse link 5 159,314,780 159,330,487 RGD:6480464
G IL17A interleukin 17A JBrowse link 6 52,186,375 52,190,638 RGD:6480464
G IL1B interleukin 1 beta JBrowse link 2 112,829,751 112,836,843 RGD:6480464
G IL2 interleukin 2 JBrowse link 4 122,449,479 122,456,725 RGD:6480464
G IL27 interleukin 27 JBrowse link 16 28,499,362 28,526,730 RGD:6480464
G IL33 interleukin 33 JBrowse link 9 6,214,591 6,257,983 RGD:6480464
G IL4 interleukin 4 JBrowse link 5 132,673,986 132,682,678 RGD:6480464
G IL6 interleukin 6 JBrowse link 7 22,725,889 22,732,002 RGD:6480464
G IRF3 interferon regulatory factor 3 JBrowse link 19 49,659,569 49,665,875 RGD:6480464
G IRF7 interferon regulatory factor 7 JBrowse link 11 612,555 615,999 RGD:6480464
G IRF9 interferon regulatory factor 9 JBrowse link 14 24,161,265 24,166,565 RGD:6480464
G ISG15 ISG15 ubiquitin like modifier JBrowse link 1 1,013,497 1,014,540 RGD:6480464
G ITGAM integrin subunit alpha M JBrowse link 16 31,259,975 31,332,877 RGD:6480464
G KLF4 Kruppel like factor 4 JBrowse link 9 107,484,852 107,489,769 RGD:6480464
G KLRK1 killer cell lectin like receptor K1 JBrowse link 12 10,372,353 10,390,041 RGD:6480464
G MAP3K11 mitogen-activated protein kinase kinase kinase 11 JBrowse link 11 65,597,755 65,614,221 RGD:6480464
G MAPK1 mitogen-activated protein kinase 1 JBrowse link 22 21,759,657 21,867,680 RGD:6480464
G MAPK3 mitogen-activated protein kinase 3 JBrowse link 16 30,114,105 30,123,309 RGD:6480464
G MIR155 microRNA 155 JBrowse link 21 25,573,980 25,574,044 RGD:6480464
G MIR26A1 microRNA 26a-1 JBrowse link 3 37,969,404 37,969,480 RGD:6480464
G MSI1 musashi RNA binding protein 1 JBrowse link 12 120,339,662 120,369,174 RGD:6480464
G MX1 MX dynamin like GTPase 1 JBrowse link 21 41,420,329 41,459,214 RGD:6480464
G MYC MYC proto-oncogene, bHLH transcription factor JBrowse link 8 127,735,434 127,742,951 RGD:6480464
G MYD88 MYD88 innate immune signal transduction adaptor JBrowse link 3 38,138,661 38,143,022 RGD:6480464
G NFKBIA NFKB inhibitor alpha JBrowse link 14 35,401,513 35,404,749 RGD:6480464
G NOS2 nitric oxide synthase 2 JBrowse link 17 27,756,766 27,800,529 RGD:6480464
G OAS1 2'-5'-oligoadenylate synthetase 1 JBrowse link 12 112,906,777 112,933,219 RGD:6480464
G OAS2 2'-5'-oligoadenylate synthetase 2 JBrowse link 12 112,978,466 113,011,723 RGD:6480464
G P2RX7 purinergic receptor P2X 7 JBrowse link 12 121,132,819 121,188,032 RGD:6480464
G P2RY2 purinergic receptor P2Y2 JBrowse link 11 73,200,416 73,246,743 RGD:6480464
G PLCB1 phospholipase C beta 1 JBrowse link 20 8,132,266 8,884,900 RGD:6480464
G POU5F1 POU class 5 homeobox 1 JBrowse link 6 31,164,337 31,170,682 RGD:6480464
G PRF1 perforin 1 JBrowse link 10 70,597,348 70,602,788 RGD:6480464
G PTGS2 prostaglandin-endoperoxide synthase 2 JBrowse link 1 186,671,791 186,680,423 RGD:6480464
G RELA RELA proto-oncogene, NF-kB subunit JBrowse link 11 65,653,596 65,662,972 RGD:6480464
G RGS4 regulator of G protein signaling 4 JBrowse link 1 163,068,606 163,076,802 RGD:6480464
G SERPINE1 serpin family E member 1 JBrowse link 7 101,127,104 101,139,247 RGD:6480464
G SESN2 sestrin 2 JBrowse link 1 28,259,452 28,282,491 RGD:6480464
G SOCS1 suppressor of cytokine signaling 1 JBrowse link 16 11,254,417 11,256,182 RGD:6480464
G SOCS3 suppressor of cytokine signaling 3 JBrowse link 17 78,356,777 78,360,079 RGD:6480464
G SOD2 superoxide dismutase 2 JBrowse link 6 159,669,069 159,762,281 RGD:6480464
G SOX2 SRY-box transcription factor 2 JBrowse link 3 181,711,925 181,714,436 RGD:6480464
G STAT1 signal transducer and activator of transcription 1 JBrowse link 2 190,968,989 191,014,250 RGD:6480464
G STAT2 signal transducer and activator of transcription 2 JBrowse link 12 56,341,597 56,360,161 RGD:6480464
G STAT3 signal transducer and activator of transcription 3 JBrowse link 17 42,313,324 42,388,502 RGD:6480464
G TBK1 TANK binding kinase 1 JBrowse link 12 64,452,105 64,502,114 RGD:6480464
G TICAM1 toll like receptor adaptor molecule 1 JBrowse link 19 4,815,932 4,831,712 RGD:6480464
G TIMP1 TIMP metallopeptidase inhibitor 1 JBrowse link X 47,582,408 47,586,789 RGD:6480464
G TLR2 toll like receptor 2 JBrowse link 4 153,684,080 153,710,643 RGD:6480464
G TLR3 toll like receptor 3 JBrowse link 4 186,069,156 186,088,073 RGD:6480464
G TLR7 toll like receptor 7 JBrowse link X 12,867,072 12,890,361 RGD:6480464
G TMPRSS2 transmembrane serine protease 2 JBrowse link 21 41,464,305 41,508,158 RGD:6480464
G TNF tumor necrosis factor JBrowse link 6 31,575,565 31,578,336 RGD:6480464
G TNFSF10 TNF superfamily member 10 JBrowse link 3 172,505,508 172,523,430 RGD:6480464
G TP53 tumor protein p53 JBrowse link 17 7,668,402 7,687,550 RGD:6480464
G TRAF6 TNF receptor associated factor 6 JBrowse link 11 36,483,769 36,510,313 RGD:6480464
G TSLP thymic stromal lymphopoietin JBrowse link 5 111,070,080 111,078,026 RGD:6480464
G TXN thioredoxin JBrowse link 9 110,243,810 110,256,507 RGD:6480464
G UGT2B17 UDP glucuronosyltransferase family 2 member B17 JBrowse link 4 68,537,184 68,576,354 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 23841
    role 23728
      application 23139
        solvent 17857
          phosphoric acid 8128
            phosphoric acid derivative 7794
              organic phosphate 7793
                nucleoside phosphate 1554
                  cytidine phosphate 129
                    cytidine 5'-phosphate 129
                      5'-O-\{(S)-hydroxy[(3-\{[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]amino\}propanoyl)oxy]phosphoryl\}cytidine 0
                      CDP + 5
                      CMP-5'-phosphonoformic acid 0
                      CTP + 2
                      cytidine 5'-monophosphate + 124
                      cytidine 5'-phosphate 2',3'-cyclic phosphate 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 23841
    subatomic particle 23792
      composite particle 23792
        hadron 23792
          baryon 23792
            nucleon 23792
              atomic nucleus 23792
                atom 23792
                  main group element atom 23610
                    p-block element atom 23610
                      chalcogen 22850
                        oxygen atom 22807
                          oxygen molecular entity 22807
                            hydroxides 22058
                              oxoacid 21210
                                pnictogen oxoacid 10609
                                  phosphorus oxoacid 9368
                                    phosphoric acids 8128
                                      phosphoric acid 8128
                                        phosphoric acid derivative 7794
                                          phosphate 7794
                                            organic phosphate 7793
                                              nucleoside phosphate 1554
                                                cytidine phosphate 129
                                                  cytidine 5'-phosphate 129
                                                    5'-O-\{(S)-hydroxy[(3-\{[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]amino\}propanoyl)oxy]phosphoryl\}cytidine 0
                                                    CDP + 5
                                                    CMP-5'-phosphonoformic acid 0
                                                    CTP + 2
                                                    cytidine 5'-monophosphate + 124
                                                    cytidine 5'-phosphate 2',3'-cyclic phosphate 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.