Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:camalexin
go back to main search page
Accession:CHEBI:22990 term browser browse the term
Definition:An indole phytoalexin that is indole substituted at position 3 by a 1,3-thiazol-2-yl group.
Synonyms:exact_synonym: 3-(1,3-thiazol-2-yl)-1H-indole
 related_synonym: 3-thiazol-2'-yl-indole;   Formula=C11H8N2S;   InChI=1S/C11H8N2S/c1-2-4-10-8(3-1)9(7-13-10)11-12-5-6-14-11/h1-7,13H;   InChIKey=IYODIJVWGPRBGQ-UHFFFAOYSA-N;   SMILES=C=1(C=2SC=CN2)C=3C(=CC=CC3)NC1
 xref: Beilstein:4310041
 xref_mesh: MESH:C102405
 xref: MetaCyc:THIAZOL-YL-INDOLE;   PMID:19567706;   PMID:21239642;   PMID:21910963;   PMID:21985584;   PMID:22209038;   PMID:22295908;   PMID:22342657;   PMID:22350766;   PMID:22392279;   PMID:22522512;   PMID:22624950;   PMID:22783269;   Reaxys:4310041


show annotations for term's descendants           Sort by:
 
camalexin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bax BCL2 associated X, apoptosis regulator increases expression ISO camalexin metabolite results in increased expression of BAX mRNA CTD PMID:23339777 NCBI chr 1:95,940,001...95,945,407
Ensembl chr 1:95,938,808...95,945,368
JBrowse link
G Bcl2 BCL2, apoptosis regulator decreases expression ISO camalexin metabolite results in decreased expression of BCL2 mRNA CTD PMID:23339777 NCBI chr13:22,689,783...22,853,920 JBrowse link
G Bcl2l1 Bcl2-like 1 decreases expression ISO camalexin metabolite results in decreased expression of BCL2L1 mRNA CTD PMID:23339777 NCBI chr 3:141,253,508...141,304,582
Ensembl chr 3:141,253,523...141,303,479
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19812
    role 19761
      biological role 19761
        biochemical role 19381
          metabolite 19356
            camalexin 3
              6-methoxycamalexin 0
              dihydrocamalexic acid + 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19812
    subatomic particle 19811
      composite particle 19811
        hadron 19811
          baryon 19811
            nucleon 19811
              atomic nucleus 19811
                atom 19811
                  main group element atom 19708
                    p-block element atom 19708
                      carbon group element atom 19630
                        carbon atom 19620
                          organic molecular entity 19620
                            organic molecule 19560
                              organic cyclic compound 19351
                                organic heterocyclic compound 18582
                                  organic heteropolycyclic compound 18059
                                    organic heterobicyclic compound 16869
                                      benzopyrrole 9559
                                        indoles 9231
                                          indole phytoalexin 6
                                            camalexin 3
                                              6-methoxycamalexin 0
                                              dihydrocamalexic acid + 0
paths to the root