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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:camalexin
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Accession:CHEBI:22990 term browser browse the term
Definition:An indole phytoalexin that is indole substituted at position 3 by a 1,3-thiazol-2-yl group.
Synonyms:exact_synonym: 3-(1,3-thiazol-2-yl)-1H-indole
 related_synonym: 3-thiazol-2'-yl-indole;   Formula=C11H8N2S;   InChI=1S/C11H8N2S/c1-2-4-10-8(3-1)9(7-13-10)11-12-5-6-14-11/h1-7,13H;   InChIKey=IYODIJVWGPRBGQ-UHFFFAOYSA-N;   SMILES=C=1(C=2SC=CN2)C=3C(=CC=CC3)NC1
 xref: Beilstein:4310041
 xref_mesh: MESH:C102405
 xref: MetaCyc:THIAZOL-YL-INDOLE;   PMID:19567706;   PMID:21239642;   PMID:21910963;   PMID:21985584;   PMID:22209038;   PMID:22295908;   PMID:22342657;   PMID:22350766;   PMID:22392279;   PMID:22522512;   PMID:22624950;   PMID:22783269;   Reaxys:4310041


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camalexin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bax BCL2 associated X, apoptosis regulator increases expression ISO camalexin metabolite results in increased expression of BAX mRNA CTD PMID:23339777 NCBI chr 1:101,451,801...101,457,207
Ensembl chr 1:101,451,802...101,457,207
JBrowse link
G Bcl2 BCL2, apoptosis regulator decreases expression ISO camalexin metabolite results in decreased expression of BCL2 mRNA CTD PMID:23339777 NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374
JBrowse link
G Bcl2l1 Bcl2-like 1 decreases expression ISO camalexin metabolite results in decreased expression of BCL2L1 mRNA CTD PMID:23339777 NCBI chr 3:148,259,594...148,314,191
Ensembl chr 3:148,259,596...148,313,810
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19785
    role 19732
      biological role 19732
        biochemical role 19281
          metabolite 19262
            camalexin 3
              6-methoxycamalexin 0
              dihydrocamalexic acid + 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19785
    subatomic particle 19782
      composite particle 19782
        hadron 19782
          baryon 19782
            nucleon 19782
              atomic nucleus 19782
                atom 19782
                  main group element atom 19670
                    p-block element atom 19670
                      carbon group element atom 19572
                        carbon atom 19561
                          organic molecular entity 19561
                            organic molecule 19486
                              organic cyclic compound 19282
                                organic heterocyclic compound 18407
                                  organic heteropolycyclic compound 17820
                                    organic heterobicyclic compound 16742
                                      benzopyrrole 9339
                                        indoles 9193
                                          indole phytoalexin 6
                                            camalexin 3
                                              6-methoxycamalexin 0
                                              dihydrocamalexic acid + 0
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