Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term:(Z)-glucosinolate(1-)
go back to main search page
Accession:CHEBI:183098 term browser browse the term
Synonyms:related_synonym: Formula=C7H11NO9S2R;   SMILES=[C@H]1(O[C@@H]([C@@H](O)[C@@H]([C@H]1O)O)CO)S/C(=N\\OS([O-])(=O)=O)/*;   a (Z)-glucosinolate
 xref: MetaCyc:Glucosinolates


show annotations for term's descendants           Sort by:
glucoerucin(1-) term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP1A1 cytochrome P450 family 1 subfamily A member 1 increases expression ISO glucoerucin results in increased expression of CYP1A1 protein CTD PMID:20833222 NCBI chr15:74,719,542...74,725,528
Ensembl chr15:74,719,542...74,725,536 		JBrowse link
G CYP1A2 cytochrome P450 family 1 subfamily A member 2 increases expression ISO glucoerucin results in increased expression of CYP1A2 protein CTD PMID:20833222 NCBI chr15:74,748,845...74,756,607
Ensembl chr15:74,748,845...74,756,607 		JBrowse link
G CYP1B1 cytochrome P450 family 1 subfamily B member 1 increases expression ISO glucoerucin results in increased expression of CYP1B1 protein CTD PMID:20833222 NCBI chr 2:38,067,509...38,076,151
Ensembl chr 2:38,066,973...38,109,902 		JBrowse link
G EPHX1 epoxide hydrolase 1 increases expression ISO glucoerucin results in increased expression of EPHX1 protein CTD PMID:21132492 NCBI chr 1:225,810,124...225,845,563
Ensembl chr 1:225,810,124...225,845,563 		JBrowse link
G NQO1 NAD(P)H quinone dehydrogenase 1 increases activity ISO glucoerucin results in increased activity of NQO1 protein CTD PMID:20833222 NCBI chr16:69,709,401...69,726,560
Ensembl chr16:69,706,996...69,726,668 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 26439
    role 26271
      biological role 26250
        biochemical role 25453
          metabolite 25387
            eukaryotic metabolite 24850
              plant metabolite 20969
                glucosinolate 5
                  (Z)-glucosinolate(1-) 5
                    (Z)-alkenyl glucosinolate(1-) 0
                    (Z)-progoitrin(1-) 0
                    glucoerucin(1-) 5
                    glucoraphanin(1-) + 0
                    glucotropeolin(1-) + 0
                    sinigrin(1-) + 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 26439
    subatomic particle 26415
      composite particle 26415
        hadron 26415
          baryon 26415
            nucleon 26415
              atomic nucleus 26415
                atom 26415
                  main group element atom 26161
                    p-block element atom 26161
                      chalcogen 25071
                        oxygen atom 24874
                          oxygen molecular entity 24874
                            oxide 13806
                              oxoanion 10872
                                chalcogen oxoanion 725
                                  sulfur oxoanion 723
                                    glycosinolate 5
                                      glucosinolate 5
                                        (Z)-glucosinolate(1-) 5
                                          (Z)-alkenyl glucosinolate(1-) 0
                                          (Z)-progoitrin(1-) 0
                                          glucoerucin(1-) 5
                                          glucoraphanin(1-) + 0
                                          glucotropeolin(1-) + 0
                                          sinigrin(1-) + 0
paths to the root