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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:UDP-D-galactose
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Accession:CHEBI:18307 term browser browse the term
Definition:A UDP-sugar having D-galactose as the sugar component.
Synonyms:exact_synonym: uridine 5'-[3-(D-galactopyranosyl) dihydrogen diphosphate]
 related_synonym: Formula=C15H24N2O17P2;   InChI=1S/C15H24N2O17P2/c18-3-5-8(20)10(22)12(24)14(32-5)33-36(28,29)34-35(26,27)30-4-6-9(21)11(23)13(31-6)17-2-1-7(19)16-15(17)25/h1-2,5-6,8-14,18,20-24H,3-4H2,(H,26,27)(H,28,29)(H,16,19,25)/t5-,6-,8+,9-,10+,11-,12-,13-,14?/m1/s1;   InChIKey=HSCJRCZFDFQWRP-LNYDKVEPSA-N;   SMILES=OC[C@H]1OC(OP(O)(=O)OP(O)(=O)OC[C@H]2O[C@H]([C@H](O)[C@@H]2O)n2ccc(=O)[nH]c2=O)[C@H](O)[C@@H](O)[C@H]1O;   UDP-D-galactopyranose;   UDPgalactose;   Udp galactose;   Udpgal;   Uridine 5'-(trihydrogen diphosphate), P'-alpha-D-galactopyranosyl ester;   Uridine diphosphate galactose;   Uridine diphosphogalactose;   Uridine pyrophosphogalactose;   Uridinediphosphogalactose
 alt_id: CHEBI:13487;   CHEBI:13495;   CHEBI:22100;   CHEBI:42751;   CHEBI:9811
 xref: Beilstein:773447;   CAS:2956-16-3;   DrugBank:DB03501;   HMDB:HMDB0000302;   KEGG:C00052
 xref_mesh: MESH:D014531
 xref: PDBeChem:GDU;   PMID:19699703;   PMID:24041039;   Reaxys:773447
 cyclic_relationship: is_conjugate_acid_of CHEBI:58439


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UDP-D-galactose term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gale UDP-galactose-4-epimerase affects binding ISO Uridine Diphosphate Galactose binds to GALE protein CTD PMID:25526675 NCBI chr 5:154,310,453...154,314,959
Ensembl chr 5:154,310,453...154,314,955
JBrowse link
G Gpr17 G protein-coupled receptor 17 increases activity ISO Uridine Diphosphate Galactose results in increased activity of GPR17 protein CTD PMID:18974869 NCBI chr18:24,733,306...24,739,194
Ensembl chr18:24,734,330...24,735,349
JBrowse link
G Uxs1 UDP-glucuronate decarboxylase 1 multiple interactions ISO [Uridine Diphosphate Galactose co-treated with NAD] binds to UXS1 protein CTD PMID:25526675 NCBI chr 9:11,165,006...11,240,329
Ensembl chr 9:11,164,715...11,339,790
JBrowse link
UDP-alpha-D-galactose term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gale UDP-galactose-4-epimerase affects binding ISO Uridine Diphosphate Galactose binds to GALE protein CTD PMID:25526675 NCBI chr 5:154,310,453...154,314,959
Ensembl chr 5:154,310,453...154,314,955
JBrowse link
G Gpr17 G protein-coupled receptor 17 increases activity ISO Uridine Diphosphate Galactose results in increased activity of GPR17 protein CTD PMID:18974869 NCBI chr18:24,733,306...24,739,194
Ensembl chr18:24,734,330...24,735,349
JBrowse link
G Uxs1 UDP-glucuronate decarboxylase 1 multiple interactions ISO [Uridine Diphosphate Galactose co-treated with NAD] binds to UXS1 protein CTD PMID:25526675 NCBI chr 9:11,165,006...11,240,329
Ensembl chr 9:11,164,715...11,339,790
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19783
    role 19728
      biological role 19728
        biochemical role 19314
          metabolite 19295
            eukaryotic metabolite 18967
              animal metabolite 18795
                mammalian metabolite 18794
                  human metabolite 18300
                    UDP-D-galactose 3
                      UDP-alpha-D-galactose 3
Path 2
Term Annotations click to browse term
  CHEBI ontology 19783
    subatomic particle 19782
      composite particle 19782
        hadron 19782
          baryon 19782
            nucleon 19782
              atomic nucleus 19782
                atom 19782
                  main group element atom 19670
                    p-block element atom 19670
                      chalcogen 19399
                        oxygen atom 19362
                          oxygen molecular entity 19362
                            hydroxides 19085
                              oxoacid 18282
                                pnictogen oxoacid 10309
                                  phosphorus oxoacid 9231
                                    phosphoric acids 7952
                                      phosphoric acid 7952
                                        phosphoric acid derivative 7633
                                          phosphate 7633
                                            organic phosphate 7632
                                              carbohydrate phosphate 1714
                                                phospho sugar 1639
                                                  aldose phosphate 1637
                                                    aldopentose phosphate 1631
                                                      ribose phosphate 1626
                                                        ribonucleotide 1587
                                                          ribonucleoside 5'-phosphate 601
                                                            ribonucleoside 5'-diphosphate 111
                                                              pyrimidine ribonucleoside 5'-diphosphate 21
                                                                UDP 16
                                                                  UDP-sugar 8
                                                                    UDP-D-galactose 3
                                                                      UDP-alpha-D-galactose 3
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