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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:dTDP
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Accession:CHEBI:18075 term browser browse the term
Definition:A thymidine phosphate having a diphosphate group at the 5'-position.
Synonyms:related_synonym: 2'-deoxyribosylthymine 5'-(trihydrogen diphosphate);   Deoxythymidine 5'-diphosphate;   Formula=C10H16N2O11P2;   InChI=1S/C10H16N2O11P2/c1-5-3-12(10(15)11-9(5)14)8-2-6(13)7(22-8)4-21-25(19,20)23-24(16,17)18/h3,6-8,13H,2,4H2,1H3,(H,19,20)(H,11,14,15)(H2,16,17,18)/t6-,7+,8+/m0/s1;   InChIKey=UJLXYODCHAELLY-XLPZGREQSA-N;   SMILES=Cc1cn([C@H]2C[C@H](O)[C@@H](COP(O)(=O)OP(O)(O)=O)O2)c(=O)[nH]c1=O;   deoxy-TDP;   thymidine 5'-(trihydrogen diphosphate);   thymidine 5'-diphosphate;   thymidine 5'-pyrophosphate
 alt_id: CHEBI:10500;   CHEBI:14077;   CHEBI:26998;   CHEBI:46061
 xref: Beilstein:64132;   CAS:491-97-4;   DrugBank:DB03103;   HMDB:HMDB0001274;   KEGG:C00363;   KNApSAcK:C00019696
 xref_mesh: MESH:C027923
 xref: MetaCyc:TDP;   PDBeChem:TYD;   PMID:20065942;   PMID:23394555;   Wikipedia:Thymidine_diphosphate
 cyclic_relationship: is_conjugate_acid_of CHEBI:58369


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dTDP term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gale UDP-galactose-4-epimerase affects binding ISO thymidine 5'-diphosphate binds to GALE protein CTD PMID:25526675 NCBI chr 5:154,310,453...154,314,959
Ensembl chr 5:154,310,453...154,314,955
JBrowse link
G Uxs1 UDP-glucuronate decarboxylase 1 multiple interactions ISO [thymidine 5'-diphosphate co-treated with NAD] binds to UXS1 protein CTD PMID:25526675 NCBI chr 9:11,165,006...11,240,329
Ensembl chr 9:11,164,715...11,339,790
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19775
    role 19722
      biological role 19722
        biochemical role 19323
          metabolite 19302
            thymidine 23
              thymidine phosphate 4
                dTDP 2
                  dTDP-sugar + 0
                  ethyl-dTDP 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19775
    subatomic particle 19774
      composite particle 19774
        hadron 19774
          baryon 19774
            nucleon 19774
              atomic nucleus 19774
                atom 19774
                  main group element atom 19665
                    p-block element atom 19665
                      chalcogen 19403
                        oxygen atom 19368
                          oxygen molecular entity 19368
                            hydroxides 19097
                              oxoacid 18340
                                pnictogen oxoacid 10658
                                  phosphorus oxoacid 9637
                                    phosphoric acids 8431
                                      phosphoric acid 8431
                                        phosphoric acid derivative 8132
                                          phosphate 8132
                                            organic phosphate 8131
                                              carbohydrate phosphate 1733
                                                phospho sugar 1658
                                                  aldose phosphate 1656
                                                    aldopentose phosphate 1650
                                                      deoxyaldopentose phosphate 9
                                                        2-deoxyribose phosphate 9
                                                          2'-deoxyribonucleotide 8
                                                            2'-deoxyribonucleoside 5'-phosphate 8
                                                              2'-deoxyribonucleoside 5'-diphosphate 2
                                                                pyrimidine 2'-deoxyribonucleoside 5'-diphosphate 2
                                                                  dTDP 2
                                                                    dTDP-sugar + 0
                                                                    ethyl-dTDP 0
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