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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term:dTDP
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Accession:CHEBI:18075 term browser browse the term
Definition:A thymidine phosphate having a diphosphate group at the 5'-position.
Synonyms:exact_synonym: thymidine 5'-(trihydrogen diphosphate)
 related_synonym: 2'-deoxyribosylthymine 5'-(trihydrogen diphosphate);   Deoxythymidine 5'-diphosphate;   Formula=C10H16N2O11P2;   InChI=1S/C10H16N2O11P2/c1-5-3-12(10(15)11-9(5)14)8-2-6(13)7(22-8)4-21-25(19,20)23-24(16,17)18/h3,6-8,13H,2,4H2,1H3,(H,19,20)(H,11,14,15)(H2,16,17,18)/t6-,7+,8+/m0/s1;   InChIKey=UJLXYODCHAELLY-XLPZGREQSA-N;   SMILES=Cc1cn([C@H]2C[C@H](O)[C@@H](COP(O)(=O)OP(O)(O)=O)O2)c(=O)[nH]c1=O;   deoxy-TDP;   thymidine 5'-diphosphate;   thymidine 5'-pyrophosphate
 alt_id: CHEBI:10500;   CHEBI:14077;   CHEBI:26998;   CHEBI:46061
 xref: Beilstein:64132;   CAS:491-97-4;   DrugBank:DB03103;   HMDB:HMDB0001274;   KEGG:C00363;   KNApSAcK:C00019696
 xref_mesh: MESH:C027923
 xref: MetaCyc:TDP;   PDBeChem:TYD;   PMID:20065942;   PMID:23394555;   Wikipedia:Thymidine_diphosphate
 cyclic_relationship: is_conjugate_acid_of CHEBI:58369


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dTDP term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gale UDP-galactose-4-epimerase affects binding ISO thymidine 5'-diphosphate binds to GALE protein CTD PMID:25526675 NCBI chr 5:153,477,420...153,481,926
Ensembl chr 5:153,478,325...153,481,922 		JBrowse link
G Uxs1 UDP-glucuronate decarboxylase 1 multiple interactions ISO [thymidine 5'-diphosphate co-treated with NAD] binds to UXS1 protein CTD PMID:25526675 NCBI chr 9:740,929...818,310
Ensembl chr 9:740,724...818,319 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 20862
    role 20820
      biological role 20818
        biochemical role 20264
          metabolite 20245
            thymidine 25
              thymidine phosphate 4
                dTDP 2
                  dTDP-sugar + 0
                  ethyl-dTDP 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 20862
    subatomic particle 20860
      composite particle 20860
        hadron 20860
          baryon 20860
            nucleon 20860
              atomic nucleus 20860
                atom 20860
                  main group element atom 20781
                    p-block element atom 20781
                      chalcogen 20491
                        oxygen atom 20457
                          oxygen molecular entity 20457
                            hydroxides 20230
                              oxoacid 19289
                                pnictogen oxoacid 15112
                                  phosphorus oxoacid 14667
                                    phosphoric acids 13987
                                      phosphoric acid 13987
                                        phosphoric acid derivative 13899
                                          phosphate 13898
                                            organic phosphate 13898
                                              carbohydrate phosphate 1976
                                                phospho sugar 1819
                                                  aldose phosphate 1816
                                                    aldopentose phosphate 1808
                                                      deoxyaldopentose phosphate 9
                                                        2-deoxyribose phosphate 9
                                                          2'-deoxyribonucleotide 8
                                                            2'-deoxyribonucleoside 5'-phosphate 8
                                                              2'-deoxyribonucleoside 5'-diphosphate 2
                                                                pyrimidine 2'-deoxyribonucleoside 5'-diphosphate 2
                                                                  dTDP 2
                                                                    dTDP-sugar + 0
                                                                    ethyl-dTDP 0
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