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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:dTDP
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Accession:CHEBI:18075 term browser browse the term
Definition:A thymidine phosphate having a diphosphate group at the 5'-position.
Synonyms:related_synonym: 2'-deoxyribosylthymine 5'-(trihydrogen diphosphate);   Deoxythymidine 5'-diphosphate;   Formula=C10H16N2O11P2;   InChI=1S/C10H16N2O11P2/c1-5-3-12(10(15)11-9(5)14)8-2-6(13)7(22-8)4-21-25(19,20)23-24(16,17)18/h3,6-8,13H,2,4H2,1H3,(H,19,20)(H,11,14,15)(H2,16,17,18)/t6-,7+,8+/m0/s1;   InChIKey=UJLXYODCHAELLY-XLPZGREQSA-N;   SMILES=Cc1cn([C@H]2C[C@H](O)[C@@H](COP(O)(=O)OP(O)(O)=O)O2)c(=O)[nH]c1=O;   deoxy-TDP;   thymidine 5'-(trihydrogen diphosphate);   thymidine 5'-diphosphate;   thymidine 5'-pyrophosphate
 alt_id: CHEBI:10500;   CHEBI:14077;   CHEBI:26998;   CHEBI:46061
 xref: Beilstein:64132;   CAS:491-97-4;   DrugBank:DB03103;   HMDB:HMDB0001274;   KEGG:C00363;   KNApSAcK:C00019696
 xref_mesh: MESH:C027923
 xref: MetaCyc:TDP;   PDBeChem:TYD;   PMID:20065942;   PMID:23394555;   Wikipedia:Thymidine_diphosphate
 cyclic_relationship: is_conjugate_acid_of CHEBI:58369


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dTDP term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gale UDP-galactose-4-epimerase affects binding ISO thymidine 5'-diphosphate binds to GALE protein CTD PMID:25526675 NCBI chr 5:154,310,453...154,314,959
Ensembl chr 5:154,310,453...154,314,955
JBrowse link
G Uxs1 UDP-glucuronate decarboxylase 1 multiple interactions ISO [thymidine 5'-diphosphate co-treated with NAD] binds to UXS1 protein CTD PMID:25526675 NCBI chr 9:11,165,006...11,240,329
Ensembl chr 9:11,164,715...11,339,790
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19810
    role 19758
      biological role 19758
        biochemical role 19304
          metabolite 19285
            thymidine 23
              thymidine phosphate 4
                dTDP 2
                  dTDP-sugar + 0
                  ethyl-dTDP 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19810
    subatomic particle 19808
      composite particle 19808
        hadron 19808
          baryon 19808
            nucleon 19808
              atomic nucleus 19808
                atom 19808
                  main group element atom 19696
                    p-block element atom 19696
                      chalcogen 19391
                        oxygen atom 19353
                          oxygen molecular entity 19353
                            hydroxides 19103
                              oxoacid 18235
                                pnictogen oxoacid 10181
                                  phosphorus oxoacid 9072
                                    phosphoric acids 7831
                                      phosphoric acid 7831
                                        phosphoric acid derivative 7511
                                          phosphate 7511
                                            organic phosphate 7510
                                              carbohydrate phosphate 1536
                                                phospho sugar 1462
                                                  aldose phosphate 1460
                                                    aldopentose phosphate 1454
                                                      deoxyaldopentose phosphate 9
                                                        2-deoxyribose phosphate 9
                                                          2'-deoxyribonucleotide 8
                                                            2'-deoxyribonucleoside 5'-phosphate 8
                                                              2'-deoxyribonucleoside 5'-diphosphate 2
                                                                pyrimidine 2'-deoxyribonucleoside 5'-diphosphate 2
                                                                  dTDP 2
                                                                    dTDP-sugar + 0
                                                                    ethyl-dTDP 0
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