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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:dTDP
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Accession:CHEBI:18075 term browser browse the term
Definition:A thymidine phosphate having a diphosphate group at the 5'-position.
Synonyms:related_synonym: 2'-deoxyribosylthymine 5'-(trihydrogen diphosphate);   Deoxythymidine 5'-diphosphate;   Formula=C10H16N2O11P2;   InChI=1S/C10H16N2O11P2/c1-5-3-12(10(15)11-9(5)14)8-2-6(13)7(22-8)4-21-25(19,20)23-24(16,17)18/h3,6-8,13H,2,4H2,1H3,(H,19,20)(H,11,14,15)(H2,16,17,18)/t6-,7+,8+/m0/s1;   InChIKey=UJLXYODCHAELLY-XLPZGREQSA-N;   SMILES=Cc1cn([C@H]2C[C@H](O)[C@@H](COP(O)(=O)OP(O)(O)=O)O2)c(=O)[nH]c1=O;   deoxy-TDP;   thymidine 5'-(trihydrogen diphosphate);   thymidine 5'-diphosphate;   thymidine 5'-pyrophosphate
 alt_id: CHEBI:10500;   CHEBI:14077;   CHEBI:26998;   CHEBI:46061
 xref: Beilstein:64132;   CAS:491-97-4;   DrugBank:DB03103;   HMDB:HMDB0001274;   KEGG:C00363;   KNApSAcK:C00019696
 xref_mesh: MESH:C027923
 xref: MetaCyc:TDP;   PDBeChem:TYD;   PMID:20065942;   PMID:23394555;   Wikipedia:Thymidine_diphosphate
 cyclic_relationship: is_conjugate_acid_of CHEBI:58369


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dTDP term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gale UDP-galactose-4-epimerase affects binding ISO thymidine 5'-diphosphate binds to GALE protein CTD PMID:25526675 NCBI chr 5:148,193,886...148,198,392
Ensembl chr 5:148,194,791...148,198,388
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G Uxs1 UDP-glucuronate decarboxylase 1 multiple interactions ISO [thymidine 5'-diphosphate co-treated with NAD] binds to UXS1 protein CTD PMID:25526675 NCBI chr 9:653,740...731,121
Ensembl chr 9:653,659...756,334
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19821
    role 19769
      biological role 19769
        biochemical role 19389
          metabolite 19364
            thymidine 23
              thymidine phosphate 4
                dTDP 2
                  dTDP-sugar + 0
                  ethyl-dTDP 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19821
    subatomic particle 19819
      composite particle 19819
        hadron 19819
          baryon 19819
            nucleon 19819
              atomic nucleus 19819
                atom 19819
                  main group element atom 19716
                    p-block element atom 19716
                      chalcogen 19469
                        oxygen atom 19445
                          oxygen molecular entity 19445
                            hydroxides 19180
                              oxoacid 18498
                                pnictogen oxoacid 10685
                                  phosphorus oxoacid 9666
                                    phosphoric acids 8466
                                      phosphoric acid 8466
                                        phosphoric acid derivative 8172
                                          phosphate 8172
                                            organic phosphate 8171
                                              carbohydrate phosphate 1734
                                                phospho sugar 1659
                                                  aldose phosphate 1657
                                                    aldopentose phosphate 1651
                                                      deoxyaldopentose phosphate 9
                                                        2-deoxyribose phosphate 9
                                                          2'-deoxyribonucleotide 8
                                                            2'-deoxyribonucleoside 5'-phosphate 8
                                                              2'-deoxyribonucleoside 5'-diphosphate 2
                                                                pyrimidine 2'-deoxyribonucleoside 5'-diphosphate 2
                                                                  dTDP 2
                                                                    dTDP-sugar + 0
                                                                    ethyl-dTDP 0
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