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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:thiocyanate
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Accession:CHEBI:18022 term browser browse the term
Definition:A pseudohalide anion obtained by deprotonation of the thiol group of thiocyanic acid.
Synonyms:exact_synonym: nitridosulfidocarbonate(1-);   nitridothiocarbonate(1-);   nitridothiocarbonate(IV)
 related_synonym: Formula=CNS;   InChI=1S/CHNS/c2-1-3/h3H/p-1;   InChIKey=ZMZDMBWJUHKJPS-UHFFFAOYSA-M;   NCS-;   Rhodanid;   SCN;   SMILES=[S-]C#N;   THIOCYANATE ION;   Thiozyanat;   [S-]C#N;   rhodanide;   thiocyanate ion (1-)
 alt_id: CHEBI:15234;   CHEBI:24926;   CHEBI:26954;   CHEBI:45576
 xref: Beilstein:1901207;   CAS:302-04-5;   Gmelin:1089
 xref_mesh: MESH:C031760
 xref: PDBeChem:SCN;   UM-BBD_compID:c0560
 cyclic_relationship: is_conjugate_base_of CHEBI:24928;   is_conjugate_base_of CHEBI:29200


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thiocyanate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cftr CF transmembrane conductance regulator affects transport ISO CFTR protein affects the transport of thiocyanate CTD PMID:15345749 NCBI chr 4:42,693,263...42,860,679
Ensembl chr 4:42,692,836...42,860,676
JBrowse link
G Slc5a5 solute carrier family 5 member 5 multiple interactions
affects transport
ISO thiocyanate inhibits the reaction [SLC5A5 protein results in increased uptake of Iodides]
SLC5A5 protein affects the transport of thiocyanate
CTD PMID:15345749 PMID:15850642 NCBI chr16:20,297,414...20,307,401
Ensembl chr16:20,297,414...20,307,400
JBrowse link
G Tshb thyroid stimulating hormone subunit beta increases expression ISO thiocyanate results in increased expression of TSHB protein CTD PMID:20439182 NCBI chr 2:205,207,799...205,215,199
Ensembl chr 2:205,207,799...205,212,681
JBrowse link
sodium thiocyanate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc5a5 solute carrier family 5 member 5 multiple interactions ISO sodium thiocyanate inhibits the reaction [SLC5A5 protein results in increased uptake of Iodine]; sodium thiocyanate inhibits the reaction [SLC5A5 protein results in increased uptake of perrhenate analog]; sodium thiocyanate inhibits the reaction [SLC5A5 protein results in increased uptake of Sodium Iodide analog]; sodium thiocyanate inhibits the reaction [SLC5A5 protein results in increased uptake of Sodium Pertechnetate Tc 99m] CTD PMID:12488351 PMID:27979590 NCBI chr16:20,297,414...20,307,401
Ensembl chr16:20,297,414...20,307,400
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19810
    chemical entity 19810
      atom 19808
        nonmetal atom 19683
          sulfur atom 16289
            sulfur molecular entity 16289
              thiocyanate 3
                potassium thiocyanate 0
                sodium thiocyanate 1
Path 2
Term Annotations click to browse term
  CHEBI ontology 19810
    subatomic particle 19808
      composite particle 19808
        hadron 19808
          baryon 19808
            nucleon 19808
              atomic nucleus 19808
                atom 19808
                  group 19722
                    polyatomic entity 19721
                      polyatomic ion 12236
                        polyatomic anion 8765
                          polyatomic monoanion 58
                            pseudohalide anion 58
                              thiocyanate 3
                                potassium thiocyanate 0
                                sodium thiocyanate 1
paths to the root