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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:thiocyanate
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Accession:CHEBI:18022 term browser browse the term
Definition:A pseudohalide anion obtained by deprotonation of the thiol group of thiocyanic acid.
Synonyms:exact_synonym: nitridosulfidocarbonate(1-);   nitridothiocarbonate(1-);   nitridothiocarbonate(IV)
 related_synonym: Formula=CNS;   InChI=1S/CHNS/c2-1-3/h3H/p-1;   InChIKey=ZMZDMBWJUHKJPS-UHFFFAOYSA-M;   NCS-;   Rhodanid;   SCN;   SMILES=[S-]C#N;   THIOCYANATE ION;   Thiozyanat;   [S-]C#N;   rhodanide;   thiocyanate ion (1-)
 alt_id: CHEBI:15234;   CHEBI:24926;   CHEBI:26954;   CHEBI:45576
 xref: Beilstein:1901207;   CAS:302-04-5;   Gmelin:1089
 xref_mesh: MESH:C031760
 xref: PDBeChem:SCN;   UM-BBD_compID:c0560
 cyclic_relationship: is_conjugate_base_of CHEBI:24928;   is_conjugate_base_of CHEBI:29200



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thiocyanate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cftr CF transmembrane conductance regulator affects transport ISO CFTR protein affects the transport of thiocyanate CTD PMID:15345749 NCBI chr 4:46,561,269...46,728,759
Ensembl chr 4:46,560,885...46,728,756
JBrowse link
G Slc5a5 solute carrier family 5 member 5 multiple interactions
affects transport
ISO thiocyanate inhibits the reaction [SLC5A5 protein results in increased uptake of Iodides]
SLC5A5 protein affects the transport of thiocyanate
CTD PMID:15345749 PMID:15850642 NCBI chr16:18,546,709...18,556,698
Ensembl chr16:18,546,709...18,556,697
JBrowse link
G Tshb thyroid stimulating hormone subunit beta increases expression ISO thiocyanate results in increased expression of TSHB protein CTD PMID:20439182 NCBI chr 2:190,224,676...190,229,559
Ensembl chr 2:190,224,676...190,229,559
JBrowse link
sodium thiocyanate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc5a5 solute carrier family 5 member 5 multiple interactions ISO sodium thiocyanate inhibits the reaction [SLC5A5 protein results in increased uptake of Iodine]; sodium thiocyanate inhibits the reaction [SLC5A5 protein results in increased uptake of perrhenate analog]; sodium thiocyanate inhibits the reaction [SLC5A5 protein results in increased uptake of Sodium Iodide analog]; sodium thiocyanate inhibits the reaction [SLC5A5 protein results in increased uptake of Sodium Pertechnetate Tc 99m] CTD PMID:12488351 PMID:27979590 NCBI chr16:18,546,709...18,556,698
Ensembl chr16:18,546,709...18,556,697
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19795
    chemical entity 19795
      atom 19794
        nonmetal atom 19681
          sulfur atom 16418
            sulfur molecular entity 16418
              thiocyanate 3
                potassium thiocyanate 0
                sodium thiocyanate 1
Path 2
Term Annotations click to browse term
  CHEBI ontology 19795
    subatomic particle 19794
      composite particle 19794
        hadron 19794
          baryon 19794
            nucleon 19794
              atomic nucleus 19794
                atom 19794
                  group 19717
                    polyatomic entity 19716
                      polyatomic ion 12343
                        polyatomic anion 9039
                          polyatomic monoanion 369
                            pseudohalide anion 369
                              thiocyanate 3
                                potassium thiocyanate 0
                                sodium thiocyanate 1
paths to the root