Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:serine
go back to main search page
Accession:CHEBI:17822 term browser browse the term
Definition:An alpha-amino acid that is alanine substituted at position 3 by a hydroxy group.
Synonyms:related_synonym: 2-Amino-3-hydroxypropionic acid;   2-amino-3-hydroxypropanoic acid;   3-Hydroxyalanine;   Formula=C3H7NO3;   InChI=1S/C3H7NO3/c4-2(1-5)3(6)7/h2,5H,1,4H2,(H,6,7);   InChIKey=MTCFGRXMJLQNBG-UHFFFAOYSA-N;   SMILES=NC(CO)C(O)=O;   Serin
 alt_id: CHEBI:15081;   CHEBI:26648;   CHEBI:9116
 xref: Beilstein:1721402 "Beilstein";   CAS:302-84-1 "ChemIDplus";   CAS:302-84-1 "KEGG COMPOUND";   CAS:302-84-1 "NIST Chemistry WebBook";   Gmelin:26429 "Gmelin";   KEGG:C00716;   KNApSAcK:C00001393;   Reaxys:1721402 "Reaxys";   Wikipedia:Serine
 cyclic_relationship: is_conjugate_acid_of CHEBI:32845;   is_conjugate_base_of CHEBI:32846;   is_tautomer_of CHEBI:35243


show annotations for term's descendants       view all columns           Sort by:
 
D-cycloserine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ddit3 DNA-damage inducible transcript 3 JBrowse link 7 70,578,564 70,585,074 RGD:6480464
G Egr1 early growth response 1 JBrowse link 18 27,657,903 27,660,101 RGD:6480464
G Fos Fos proto-oncogene, AP-1 transcription factor subunit JBrowse link 6 109,300,433 109,303,299 RGD:6480464
G Homer1 homer scaffold protein 1 JBrowse link 2 22,909,550 23,012,303 RGD:6480464
G Mapk1 mitogen activated protein kinase 1 JBrowse link 11 88,203,863 88,273,301 RGD:6480464
G Mapk3 mitogen activated protein kinase 3 JBrowse link 1 198,192,773 198,198,975 RGD:6480464
G Parp1 poly (ADP-ribose) polymerase 1 JBrowse link 13 98,857,255 98,889,444 RGD:6480464
Phe-Ser term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc15a1 solute carrier family 15 member 1 JBrowse link 15 106,800,081 106,844,668 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19716
    role 19663
      application 19308
        fuel 10307
          methanol 2951
            hydroxymethyl group 8
              serine 8
                3-oxoalanine + 0
                D-serine + 0
                L-serine + 1
                N-(2,4-dinitrophenyl)serine 0
                serine derivative + 7
                serine residue + 0
                serino group + 0
                seryl group + 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19716
    subatomic particle 19712
      composite particle 19712
        hadron 19712
          baryon 19712
            nucleon 19712
              atomic nucleus 19712
                atom 19712
                  main group element atom 19598
                    p-block element atom 19598
                      carbon group element atom 19486
                        carbon atom 19480
                          organic molecular entity 19480
                            organic group 18407
                              organic divalent group 18397
                                organodiyl group 18397
                                  carbonyl group 18285
                                    carbonyl compound 18285
                                      carboxylic acid 17940
                                        amino acid 12442
                                          polar amino acid 5917
                                            serine 8
                                              3-oxoalanine + 0
                                              D-serine + 0
                                              L-serine + 1
                                              N-(2,4-dinitrophenyl)serine 0
                                              serine derivative + 7
                                              serine residue + 0
                                              serino group + 0
                                              seryl group + 0
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.