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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:IDP
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Accession:CHEBI:17808 term browser browse the term
Definition:A purine ribonucleoside 5'-diphosphate having inosine as the nucleobase.
Synonyms:related_synonym: 2'-inosine-5'-diphosphate;   Formula=C10H14N4O11P2;   InChI=1S/C10H14N4O11P2/c15-6-4(1-23-27(21,22)25-26(18,19)20)24-10(7(6)16)14-3-13-5-8(14)11-2-12-9(5)17/h2-4,6-7,10,15-16H,1H2,(H,21,22)(H,11,12,17)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1;   InChIKey=JPXZQMKKFWMMGK-KQYNXXCUSA-N;   Inosine 5'-diphosphate;   Inosine 5'-pyrophosphate;   Inosine diphosphate;   SMILES=O[C@@H]1[C@@H](COP(O)(=O)OP(O)(O)=O)O[C@H]([C@@H]1O)n1cnc2c1nc[nH]c2=O;   inosine 5'-(trihydrogen diphosphate)
 alt_id: CHEBI:13371;   CHEBI:19270;   CHEBI:43252;   CHEBI:5848
 xref: CAS:86-04-4;   ECMDB:ECMDB03335;   HMDB:HMDB0003335;   KEGG:C00104
 xref_mesh: MESH:D007290
 xref: MetaCyc:IDP;   PDBeChem:IDP;   PMID:14389294;   PMID:16668340;   PMID:19561621;   PMID:22673202;   Reaxys:634026;   YMDB:YMDB00910
 cyclic_relationship: is_conjugate_acid_of CHEBI:58280



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IDP term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G H2ax H2A.X variant histone multiple interactions ISO Inosine Diphosphate inhibits the reaction [Cesium-137 results in increased expression of and affects the localization of H2AX protein modified form] CTD PMID:32941855 NCBI chr 8:44,671,927...44,673,257
Ensembl chr 8:44,671,786...44,673,239
JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 multiple interactions ISO Inosine Diphosphate inhibits the reaction [Cesium-137 results in increased expression of and affects the localization of TP53BP1 protein] CTD PMID:32941855 NCBI chr 3:108,166,574...108,270,229
Ensembl chr 3:108,169,980...108,269,822
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19800
    role 19751
      biological role 19751
        biochemical role 19368
          metabolite 19344
            fundamental metabolite 12781
              IDP 2
Path 2
Term Annotations click to browse term
  CHEBI ontology 19800
    subatomic particle 19799
      composite particle 19799
        hadron 19799
          baryon 19799
            nucleon 19799
              atomic nucleus 19799
                atom 19799
                  main group element atom 19698
                    p-block element atom 19698
                      chalcogen 19450
                        oxygen atom 19423
                          oxygen molecular entity 19423
                            hydroxides 19158
                              oxoacid 18472
                                pnictogen oxoacid 10733
                                  phosphorus oxoacid 9728
                                    phosphoric acids 8536
                                      phosphoric acid 8536
                                        phosphoric acid derivative 8242
                                          phosphate 8242
                                            organic phosphate 8241
                                              carbohydrate phosphate 1738
                                                phospho sugar 1663
                                                  aldose phosphate 1661
                                                    aldopentose phosphate 1653
                                                      ribose phosphate 1648
                                                        ribonucleotide 1611
                                                          ribonucleoside 5'-phosphate 611
                                                            ribonucleoside 5'-diphosphate 111
                                                              purine ribonucleoside 5'-diphosphate 96
                                                                IDP 2
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