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ONTOLOGY REPORT - ANNOTATIONS


Term:hydrogencarbonate
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Accession:CHEBI:17544 term browser browse the term
Definition:The carbon oxoanion resulting from the removal of a proton from carbonic acid.
Synonyms:exact_synonym: hydrogen(trioxidocarbonate)(1-);   hydrogencarbonate(1-);   hydrogentrioxocarbonate(1-);   hydrogentrioxocarbonate(IV);   hydroxidodioxidocarbonate(1-)
 related_synonym: Acid carbonate;   BICARBONATE ION;   Formula=CHO3;   HCO3-;   InChI=1S/CH2O3/c2-1(3)4/h(H2,2,3,4)/p-1;   InChIKey=BVKZGUZCCUSVTD-UHFFFAOYSA-M;   SMILES=OC([O-])=O;   [CO2(OH)](-);   bicarbonate;   hydrogen carbonate
 alt_id: CHEBI:13363;   CHEBI:22863;   CHEBI:40961;   CHEBI:5589;   MESH:D001639
 xref: Beilstein:3903504 "Beilstein";   CAS:71-52-3 "ChemIDplus";   Gmelin:49249 "Gmelin";   HMDB:HMDB0000595;   KEGG:C00288
 xref_mesh: MESH:D001639
 xref: MetaCyc:HCO3;   PDBeChem:BCT;   PMID:17215880 "Europe PMC";   PMID:17505962 "Europe PMC";   PMID:28732801 "Europe PMC";   PMID:29150416 "Europe PMC";   PMID:29460248 "Europe PMC";   PMID:29466234 "Europe PMC";   PMID:4208463 "Europe PMC";   Wikipedia:Bicarbonate
 cyclic_relationship: is_conjugate_acid_of CHEBI:41609;   is_conjugate_base_of CHEBI:28976


show annotations for term's descendants       view all columns           Sort by:
 
hydrogencarbonate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adcy10 adenylate cyclase 10 JBrowse link 13 83,701,952 83,787,010 RGD:6480464
G Alb albumin JBrowse link 14 19,176,275 19,191,793 RGD:6480464
G Ca3 carbonic anhydrase 3 JBrowse link 2 88,126,519 88,136,063 RGD:6480464
G Car1 carbonic anhydrase 1 JBrowse link 2 88,185,204 88,227,486 RGD:6480464
G Car2 carbonic anhydrase 2 JBrowse link 2 88,097,740 88,112,868 RGD:6480464
G Cftr CF transmembrane conductance regulator JBrowse link 4 42,693,263 42,860,679 RGD:6480464
G Edn3 endothelin 3 JBrowse link 3 172,856,730 172,879,276 RGD:6480464
G Esr1 estrogen receptor 1 JBrowse link 1 41,192,029 41,594,799 RGD:6480464
G Esr2 estrogen receptor 2 JBrowse link 6 99,163,953 99,214,711 RGD:6480464
G Slc26a3 solute carrier family 26 member 3 JBrowse link 6 50,725,085 50,766,306 RGD:6480464
G Slc39a8 solute carrier family 39 member 8 JBrowse link 2 241,028,851 241,092,584 RGD:6480464
G Slc4a2 solute carrier family 4 member 2 JBrowse link 4 7,264,677 7,282,355 RGD:6480464
G Slc9a2 solute carrier family 9 member A2 JBrowse link 9 47,386,581 47,491,813 RGD:6480464
G Slc9a3 solute carrier family 9 member A3 JBrowse link 1 31,731,652 31,777,144 RGD:6480464
G Sod1 superoxide dismutase 1 JBrowse link 11 30,363,282 30,368,858 RGD:6480464
sodium hydrogencarbonate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcc2 ATP binding cassette subfamily C member 2 JBrowse link 1 263,554,426 263,612,556 RGD:6480464
G Abcg2 ATP binding cassette subfamily G member 2 JBrowse link 4 88,765,441 88,890,268 RGD:6480464
G Fn1 fibronectin 1 JBrowse link 9 78,900,111 78,969,018 RGD:6480464
G Nefh neurofilament heavy JBrowse link 14 85,181,572 85,191,557 RGD:6480464
G Slc15a1 solute carrier family 15 member 1 JBrowse link 15 106,800,081 106,844,668 RGD:6480464
G Slc22a24 solute carrier family 22, member 24 JBrowse link 1 222,969,899 223,522,893 RGD:6480464
G Slc22a6 solute carrier family 22 member 6 JBrowse link 1 224,824,809 224,833,284 RGD:6480464
G Slc39a8 solute carrier family 39 member 8 JBrowse link 2 241,028,851 241,092,584 RGD:6480464
G Slc4a4 solute carrier family 4 member 4 JBrowse link 14 20,476,258 20,817,042 RGD:6480464
G Tgfb1 transforming growth factor, beta 1 JBrowse link 1 82,480,875 82,497,196 RGD:6480464
G Vim vimentin JBrowse link 17 80,882,715 80,891,200 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19617
    chemical entity 19615
      molecular entity 19612
        ion 16399
          organic ion 7803
            organic anion 2131
              carbon oxoanion 40
                hydrogencarbonate 25
                  potassium hydrogencarbonate 0
                  sodium hydrogencarbonate 11
Path 2
Term Annotations click to browse term
  CHEBI ontology 19617
    subatomic particle 19613
      composite particle 19613
        hadron 19613
          baryon 19613
            nucleon 19613
              atomic nucleus 19613
                atom 19613
                  main group element atom 19491
                    p-block element atom 19491
                      carbon group element atom 19363
                        carbon atom 19355
                          organic molecular entity 19355
                            heteroorganic entity 18925
                              organochalcogen compound 18674
                                organooxygen compound 18582
                                  carbon oxoanion 40
                                    hydrogencarbonate 25
                                      potassium hydrogencarbonate 0
                                      sodium hydrogencarbonate 11
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.