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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term:2'-deoxyadenosine
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Accession:CHEBI:17256 term browser browse the term
Definition:A purine 2'-deoxyribonucleoside having adenine as the nucleobase.
Synonyms:related_synonym: (2R,3S,5R)-5-(6-amino-9H-purin-9-yl)-2-(hydroxymethyl)tetrahydrofuran-3-ol;   5-(6-AMINO-PURIN-9-YL)-2-HYDROXYMETHYL-TETRAHYDRO-FURAN-3-OL;   9-(2-Deoxy-beta-D-erythro-pentofuranosyl)adenine;   9-(2-deoxy-beta-D-ribofuranosyl)-9H-purin-6-amine;   Deoxyadenosine;   Formula=C10H13N5O3;   InChI=1S/C10H13N5O3/c11-9-8-10(13-3-12-9)15(4-14-8)7-1-5(17)6(2-16)18-7/h3-7,16-17H,1-2H2,(H2,11,12,13)/t5-,6+,7+/m0/s1;   InChIKey=OLXZPDWKRNYJJZ-RRKCRQDMSA-N;   SMILES=Nc1ncnc2n(cnc12)[C@H]1C[C@H](O)[C@@H](CO)O1;   adenine deoxyribonucleoside;   adenyldeoxyriboside;   dA
 alt_id: CHEBI:14112;   CHEBI:19234;   CHEBI:39863;   CHEBI:40535;   CHEBI:40560;   CHEBI:4405
 xref: Beilstein:91015;   CAS:958-09-8;   Gmelin:283189;   HMDB:HMDB0000101;   KEGG:C00559;   KNApSAcK:C00019281
 xref_mesh: MESH:C058118
 xref: MetaCyc:DEOXYADENOSINE;   PDBeChem:3D1;   PMID:14253484;   PMID:18508186;   PMID:24144081;   PMID:8171392;   PMID:9869364;   Reaxys:91015;   Wikipedia:Deoxyadenosine


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2'-deoxyadenosine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDKN1A cyclin dependent kinase inhibitor 1A decreases expression EXP 2'-deoxyadenosine results in decreased expression of CDKN1A mRNA CTD PMID:24211769 NCBI chr 6:36,676,463...36,687,332
Ensembl chr 6:36,676,460...36,687,337 		JBrowse link
G POLB DNA polymerase beta multiple interactions EXP [diepoxybutane binds to 2'-deoxyadenosine] which results in decreased activity of POLB protein CTD PMID:26098310 NCBI chr 8:42,338,494...42,371,808
Ensembl chr 8:42,338,454...42,371,808 		JBrowse link
G POLI DNA polymerase iota multiple interactions EXP [diepoxybutane binds to 2'-deoxyadenosine] which results in decreased activity of POLI protein; POLN protein inhibits the reaction [[diepoxybutane binds to 2'-deoxyadenosine] which results in decreased activity of POLI protein] CTD PMID:26098310 NCBI chr18:54,269,479...54,321,266
Ensembl chr18:54,269,517...54,321,266 		JBrowse link
G POLK DNA polymerase kappa multiple interactions EXP [diepoxybutane binds to 2'-deoxyadenosine] which results in decreased activity of POLK protein CTD PMID:26098310 NCBI chr 5:75,510,774...75,609,991
Ensembl chr 5:75,511,845...75,609,991 		JBrowse link
G POLN DNA polymerase nu multiple interactions EXP [diepoxybutane binds to 2'-deoxyadenosine] which results in decreased activity of POLN protein; POLN protein inhibits the reaction [[diepoxybutane binds to 2'-deoxyadenosine] which results in decreased activity of POLI protein] CTD PMID:26098310 NCBI chr 4:2,071,918...2,242,121
Ensembl chr 4:2,071,918...2,242,121 		JBrowse link
G SLC29A1 solute carrier family 29 member 1 (Augustine blood group) multiple interactions ISO 2'-deoxyadenosine inhibits the reaction [SLC29A1 protein results in increased uptake of Uridine] CTD PMID:11085929 NCBI chr 6:44,219,615...44,234,142
Ensembl chr 6:44,219,553...44,234,142 		JBrowse link
G SLC29A2 solute carrier family 29 member 2 multiple interactions ISO 2'-deoxyadenosine inhibits the reaction [SLC29A2 protein results in increased uptake of Uridine] CTD PMID:11085929 NCBI chr11:66,362,521...66,372,446
Ensembl chr11:66,362,521...66,372,214 		JBrowse link
8,5'-cyclo-2'-deoxyadenosine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NEIL1 nei like DNA glycosylase 1 affects metabolic processing ISO NEIL1 protein affects the metabolism of 8,5'-cyclo-2'-deoxyadenosine CTD PMID:20067321 NCBI chr15:75,347,039...75,357,115
Ensembl chr15:75,346,955...75,357,115 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 26041
    chemical entity 26020
      atom 26016
        nonmetal atom 25505
          carbon atom 25399
            organic molecular entity 25399
              purines 2'-deoxy-D-ribonucleoside 14
                2'-deoxyadenosine 8
                  8,5'-cyclo-2'-deoxyadenosine 1
Path 2
Term Annotations click to browse term
  CHEBI ontology 26041
    subatomic particle 26016
      composite particle 26016
        hadron 26016
          baryon 26016
            nucleon 26016
              atomic nucleus 26016
                atom 26016
                  main group element atom 25841
                    p-block element atom 25841
                      carbon group element atom 25441
                        carbon atom 25399
                          organic molecular entity 25399
                            heteroorganic entity 24773
                              organochalcogen compound 24384
                                organooxygen compound 24061
                                  carbohydrates and carbohydrate derivatives 16791
                                    carbohydrate 16791
                                      carbohydrate derivative 15665
                                        glycosyl compound 13730
                                          N-glycosyl compound 6130
                                            nucleoside 5973
                                              deoxyribonucleoside 2993
                                                2'-deoxyribonucleoside 2350
                                                  purine 2'-deoxyribonucleoside 35
                                                    purines 2'-deoxy-D-ribonucleoside 14
                                                      2'-deoxyadenosine 8
                                                        8,5'-cyclo-2'-deoxyadenosine 1
paths to the root