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Term:geranyl diphosphate
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Accession:CHEBI:17211 term browser browse the term
Definition:The diphosphate of the polyprenol compound geraniol.
Synonyms:related_synonym: (2E)-3,7-dimethylocta-2,6-dien-1-yl trihydrogen diphosphate;   Formula=C10H20O7P2;   InChI=1S/C10H20O7P2/c1-9(2)5-4-6-10(3)7-8-16-19(14,15)17-18(11,12)13/h5,7H,4,6,8H2,1-3H3,(H,14,15)(H2,11,12,13)/b10-7+;   InChIKey=GVVPGTZRZFNKDS-JXMROGBWSA-N;   SMILES=CC(C)=CCC\\C(C)=C\\COP(O)(=O)OP(O)(O)=O;   geranyl pyrophosphate
 alt_id: CHEBI:14299;   CHEBI:24223;   CHEBI:42877;   CHEBI:5332
 xref: Beilstein:1915690 "Beilstein";   CAS:763-10-0 "ChemIDplus";   DrugBank:DB02552;   KEGG:C00341;   KNApSAcK:C00000846;   LIPID_MAPS_instance:LMPR0102010001 "LIPID MAPS"
 xref_mesh: MESH:C015234
 xref: PDBeChem:GPP;   PMID:19049370 "Europe PMC";   PMID:19856009 "Europe PMC";   PMID:23607888 "Europe PMC";   PMID:7753173 "Europe PMC";   Reaxys:1915690 "Reaxys"
 cyclic_relationship: is_conjugate_acid_of CHEBI:58057

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geranyl diphosphate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase JBrowse link 2 27,480,224 27,500,654 RGD:6480464
G Mvk mevalonate kinase JBrowse link 12 47,904,266 47,920,457 RGD:6480464
G Rap1a RAP1A, member of RAS oncogene family JBrowse link 2 208,193,950 208,215,186 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19679
    role 19623
      application 19246
        fragrance 705
          geraniol 387
            geranyl diphosphate 3
Path 2
Term Annotations click to browse term
  CHEBI ontology 19679
    subatomic particle 19675
      composite particle 19675
        hadron 19675
          baryon 19675
            nucleon 19675
              atomic nucleus 19675
                atom 19675
                  main group element atom 19555
                    p-block element atom 19555
                      chalcogen 19242
                        oxygen atom 19196
                          oxygen molecular entity 19196
                            hydroxides 18973
                              oxoacid 18084
                                pnictogen oxoacid 8540
                                  phosphorus oxoacid 8434
                                    phosphoric acids 7318
                                      phosphoric acid 7318
                                        phosphoric acid derivative 6968
                                          phosphate 6968
                                            organic phosphate 6967
                                              phospholipid 286
                                                isoprenoid phosphate 72
                                                  prenol phosphate 72
                                                    polyprenol phosphate 63
                                                      polyprenyl diphosphate 63
                                                        geranyl diphosphate 3
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.