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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:D-xylulose
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Accession:CHEBI:17140 term browser browse the term
Definition:The D-enantiomer of xylulose.
Synonyms:exact_synonym: D-threo-pent-2-ulose
 related_synonym: D-Lyxulose;   D-Xul;   D-threo-Pentulose;   Formula=C5H10O5;   InChI=1S/C5H10O5/c6-1-3(8)5(10)4(9)2-7/h3,5-8,10H,1-2H2/t3-,5+/m1/s1;   InChIKey=ZAQJHHRNXZUBTE-WUJLRWPWSA-N;   SMILES=C(O)C(=O)[C@@H](O)[C@H](O)CO
 alt_id: CHEBI:13035;   CHEBI:21120;   CHEBI:4268;   CHEBI:46514
 xref: CAS:551-84-8;   DrugBank:DB03947;   HMDB:HMDB0001644;   KEGG:C00310;   KNApSAcK:C00019684;   MetaCyc:D-XYLULOSE;   PDBeChem:XUL;   PMID:15234337;   Reaxys:1723052
 cyclic_relationship: is_enantiomer_of CHEBI:17399


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D-xylulose 5-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Taldo1 transaldolase 1 increases abundance ISO TALDO1 gene mutant form results in increased abundance of xylulose-5-phosphate CTD PMID:19436114 NCBI chr 1:214,375,555...214,385,886
Ensembl chr 1:214,375,515...214,385,885
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Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19816
    role 19764
      biological role 19764
        biochemical role 19313
          metabolite 19294
            prokaryotic metabolite 18402
              bacterial metabolite 18402
                Escherichia coli metabolite 18283
                  D-xylulose 1
                    1-deoxy-D-xylulose 0
                    1-deoxy-D-xylulose 5-phosphate 0
                    D-xylulose 1,5-bisphosphate 0
                    D-xylulose 5-phosphate 1
Path 2
Term Annotations click to browse term
  CHEBI ontology 19816
    subatomic particle 19814
      composite particle 19814
        hadron 19814
          baryon 19814
            nucleon 19814
              atomic nucleus 19814
                atom 19814
                  main group element atom 19702
                    p-block element atom 19702
                      carbon group element atom 19608
                        carbon atom 19597
                          organic molecular entity 19597
                            heteroorganic entity 19184
                              organochalcogen compound 18894
                                organooxygen compound 18816
                                  carbohydrates and carbohydrate derivatives 12191
                                    carbohydrate 12191
                                      monosaccharide 4035
                                        ketose 368
                                          ketopentose 2
                                            xylulose 2
                                              D-xylulose 1
                                                1-deoxy-D-xylulose 0
                                                1-deoxy-D-xylulose 5-phosphate 0
                                                D-xylulose 1,5-bisphosphate 0
                                                D-xylulose 5-phosphate 1
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