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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:D-xylulose
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Accession:CHEBI:17140 term browser browse the term
Definition:The D-enantiomer of xylulose.
Synonyms:exact_synonym: D-threo-pent-2-ulose
 related_synonym: D-Lyxulose;   D-Xul;   D-threo-Pentulose;   Formula=C5H10O5;   InChI=1S/C5H10O5/c6-1-3(8)5(10)4(9)2-7/h3,5-8,10H,1-2H2/t3-,5+/m1/s1;   InChIKey=ZAQJHHRNXZUBTE-WUJLRWPWSA-N;   SMILES=C(O)C(=O)[C@@H](O)[C@H](O)CO
 alt_id: CHEBI:13035;   CHEBI:21120;   CHEBI:4268;   CHEBI:46514
 xref: CAS:551-84-8;   DrugBank:DB03947;   HMDB:HMDB0001644;   KEGG:C00310;   KNApSAcK:C00019684;   MetaCyc:D-XYLULOSE;   PDBeChem:XUL;   PMID:15234337;   Reaxys:1723052
 cyclic_relationship: is_enantiomer_of CHEBI:17399


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D-xylulose 5-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Taldo1 transaldolase 1 increases abundance ISO TALDO1 gene mutant form results in increased abundance of xylulose-5-phosphate CTD PMID:19436114 NCBI chr 1:196,493,634...196,503,965
Ensembl chr 1:196,493,589...196,503,974
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Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19821
    role 19769
      biological role 19769
        biochemical role 19389
          metabolite 19364
            prokaryotic metabolite 18426
              bacterial metabolite 18426
                Escherichia coli metabolite 18313
                  D-xylulose 1
                    1-deoxy-D-xylulose 0
                    1-deoxy-D-xylulose 5-phosphate 0
                    D-xylulose 1,5-bisphosphate 0
                    D-xylulose 5-phosphate 1
Path 2
Term Annotations click to browse term
  CHEBI ontology 19821
    subatomic particle 19819
      composite particle 19819
        hadron 19819
          baryon 19819
            nucleon 19819
              atomic nucleus 19819
                atom 19819
                  main group element atom 19716
                    p-block element atom 19716
                      carbon group element atom 19640
                        carbon atom 19630
                          organic molecular entity 19630
                            heteroorganic entity 19294
                              organochalcogen compound 19064
                                organooxygen compound 19014
                                  carbohydrates and carbohydrate derivatives 12341
                                    carbohydrate 12341
                                      monosaccharide 4297
                                        ketose 407
                                          ketopentose 2
                                            xylulose 2
                                              D-xylulose 1
                                                1-deoxy-D-xylulose 0
                                                1-deoxy-D-xylulose 5-phosphate 0
                                                D-xylulose 1,5-bisphosphate 0
                                                D-xylulose 5-phosphate 1
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