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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:streptomycin
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Accession:CHEBI:17076 term browser browse the term
Definition:A amino cyclitol glycoside that consists of streptidine having a disaccharyl moiety attached at the 4-position. The parent of the streptomycin class
Synonyms:exact_synonym: N,N'''-[(1R,2R,3S,4R,5R,6S)-4-{5-deoxy-2-O-[2-deoxy-2-(methylamino)-alpha-L-glucopyranosyl]-3-C-formyl-alpha-L-lyxofuranosyloxy}-2,5,6-trihydroxycyclohexane-1,3-diyl]diguanidine
 related_synonym: 2,4-Diguanidino-3,5,6-trihydroxycyclohexyl 5-deoxy-2-O-(2-deoxy-2-methylamino-alpha-L-glucopyranosyl)-3-C-formyl-beta-L-lyxopentanofuranoside;   Formula=C21H39N7O12;   InChI=1S/C21H39N7O12/c1-5-21(36,4-30)16(40-17-9(26-2)13(34)10(31)6(3-29)38-17)18(37-5)39-15-8(28-20(24)25)11(32)7(27-19(22)23)12(33)14(15)35/h4-18,26,29,31-36H,3H2,1-2H3,(H4,22,23,27)(H4,24,25,28)/t5-,6-,7+,8-,9-,10-,11+,12-,13-,14+,15+,16-,17-,18-,21+/m0/s1;   InChIKey=UCSJYZPVAKXKNQ-HZYVHMACSA-N;   Kantrex;   SM;   SMILES=CN[C@H]1[C@H](O)[C@@H](O)[C@H](CO)O[C@H]1O[C@H]1[C@@H](O[C@@H](C)[C@]1(O)C=O)O[C@H]1[C@H](O)[C@@H](O)[C@H](NC(N)=N)[C@@H](O)[C@@H]1NC(N)=N;   [2-deoxy-2-(dimethylamino)-alpha-L-glucopyranosyl]-(1->2)-[5-deoxy-3-C-formyl-alpha-L-lyxofuranosyl]-(1->4)-{N',N'''-[(1,3,5/2,4,6)-2,4,5,6-tetrahydroxycyclohexane-1,3-diyl]diguanidine};   streomycin
 alt_id: CHEBI:15119;   CHEBI:26784;   CHEBI:45745;   CHEBI:9284
 xref: Beilstein:74498;   CAS:57-92-1;   DrugBank:DB01082;   Drug_Central:2481;   HMDB:HMDB0015214;   KEGG:C00413;   KEGG:D08531
 xref_mesh: MESH:D013307
 xref: MetaCyc:STREPTOMYCIN;   PDBeChem:SRY;   PMID:11228320;   PMID:11905029;   PMID:12118520;   PMID:13030054;   PMID:13116094;   PMID:13136149;   PMID:13596285;   PMID:13691614;   PMID:13985260;   PMID:13990247;   PMID:14623118;   PMID:14828344;   PMID:14852338;   PMID:14939639;   PMID:15081082;   PMID:15137533;   PMID:15207172;   PMID:15686853;   PMID:15736038;   PMID:16904706;   PMID:17105735;   PMID:17238915;   PMID:17429930;   PMID:18173084;   PMID:18916143;   PMID:19052412;   PMID:19335957;   PMID:21350946;   PMID:21362244;   PMID:21593257;   PMID:21937264;   PMID:22101040;   Pesticides:streptomycin;   Reaxys:74498;   Wikipedia:Streptomycin
 cyclic_relationship: is_conjugate_base_of CHEBI:58007



show annotations for term's descendants           Sort by:
streptomycin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoxb9 homeo box B9 multiple interactions ISO [Penicillins co-treated with Streptomycin] results in increased expression of HOXB9 mRNA CTD PMID:31711903 NCBI chr10:81,237,312...81,240,818
Ensembl chr10:81,237,312...81,240,818
JBrowse link
G Pax3 paired box 3 multiple interactions ISO [Penicillins co-treated with Streptomycin] results in increased expression of PAX3 mRNA CTD PMID:31711903 NCBI chr 9:79,567,455...79,664,042
Ensembl chr 9:79,568,634...79,664,042
JBrowse link
G Tcf15 transcription factor 15 multiple interactions ISO [Penicillins co-treated with Streptomycin] results in increased expression of TCF15 mRNA CTD PMID:31711903 NCBI chr 3:140,638,984...140,644,766
Ensembl chr 3:140,638,984...140,644,766
JBrowse link
G Tnf tumor necrosis factor multiple interactions ISO Streptomycin inhibits the reaction [Lipopolysaccharides results in increased expression of TNF protein] CTD PMID:17699551 NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
JBrowse link
G Uncx UNC homeobox multiple interactions ISO [Penicillins co-treated with Streptomycin] results in increased expression of UNCX mRNA CTD PMID:31711903 NCBI chr12:15,092,779...15,097,300
Ensembl chr12:15,092,784...15,097,300
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19918
    role 19894
      biological role 19892
        antimicrobial agent 18166
          streptomycin 5
            3''-adenylylstreptomycin 0
            5'-hydroxystreptomycin 0
            streptomycin sulfate 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19918
    subatomic particle 19916
      composite particle 19916
        hadron 19916
          baryon 19916
            nucleon 19916
              atomic nucleus 19916
                atom 19916
                  main group element atom 19866
                    p-block element atom 19866
                      carbon group element atom 19811
                        carbon atom 19806
                          organic molecular entity 19806
                            heteroorganic entity 19548
                              organochalcogen compound 19303
                                organooxygen compound 19217
                                  carbohydrates and carbohydrate derivatives 15307
                                    carbohydrate 15307
                                      carbohydrate derivative 14311
                                        glycosyl compound 13060
                                          glycoside 11842
                                            aminoglycoside 11274
                                              aminoglycoside antibiotic 7537
                                                streptomycins 5
                                                  streptomycin 5
                                                    3''-adenylylstreptomycin 0
                                                    5'-hydroxystreptomycin 0
                                                    streptomycin sulfate 0
paths to the root