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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:3-phosphoglyceric acid
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Accession:CHEBI:17050 term browser browse the term
Definition:A monophosphoglyceric acid having the phospho group at the 3-position. It is an intermediate in metabolic pathways like glycolysis and calvin cycle.
Synonyms:exact_synonym: 2-hydroxy-3-(phosphonooxy)propanoic acid
 related_synonym: 3-(dihydrogen phosphate)Glycerate;   3-(dihydrogen phosphate)Glyceric acid;   3-Phosphoglycerate;   DL-Glycerate 3-phosphate;   Formula=C3H7O7P;   Glycerate 3-phosphate;   Glyceric acid 3-phosphate;   InChI=1S/C3H7O7P/c4-2(3(5)6)1-10-11(7,8)9/h2,4H,1H2,(H,5,6)(H2,7,8,9);   InChIKey=OSJPPGNTCRNQQC-UHFFFAOYSA-N;   SMILES=OC(COP(O)(O)=O)C(O)=O;   glycerate 3-phosphates
 alt_id: CHEBI:11882;   CHEBI:1659;   CHEBI:24345;   CHEBI:40016
 xref: CAS:820-11-1;   Chemspider:704;   DrugBank:DB04510;   HMDB:HMDB0000807;   KEGG:C00597;   KNApSAcK:C00007286
 xref_mesh: MESH:C005156
 xref: PMID:17439666;   PMID:22735334;   Reaxys:1726829;   Wikipedia:3-Phosphoglyceric_acid
 cyclic_relationship: is_conjugate_acid_of CHEBI:132960;   is_conjugate_acid_of CHEBI:57998;   is_conjugate_acid_of CHEBI:88005


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3-phosphoglyceric acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gapdh glyceraldehyde-3-phosphate dehydrogenase multiple interactions EXP [GAPDH protein co-treated with 3-phosphoglycerate co-treated with NAD] results in increased chemical synthesis of sodium arsenite; [GAPDH protein co-treated with 3-phosphoglycerate co-treated with NAD] results in increased reduction of sodium arsenate analog; heptelidic acid inhibits the reaction [[GAPDH protein co-treated with 3-phosphoglycerate co-treated with NAD] results in increased reduction of sodium arsenate analog] CTD PMID:15788719 NCBI chr 4:157,676,336...157,680,322
Ensembl chr 4:157,676,595...157,679,962
JBrowse link
G Idh2 isocitrate dehydrogenase (NADP(+)) 2 multiple interactions
increases abundance
ISO Triazines inhibits the reaction [IDH2 protein mutant form results in increased abundance of 3-phosphoglycerate] CTD PMID:27469509 NCBI chr 1:141,874,354...141,893,674
Ensembl chr 1:141,866,283...141,893,705
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19875
    role 19825
      biological role 19825
        biochemical role 19360
          metabolite 19341
            fundamental metabolite 12666
              3-phosphoglyceric acid 2
                3-phospho-D-glyceric acid 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19875
    subatomic particle 19873
      composite particle 19873
        hadron 19873
          baryon 19873
            nucleon 19873
              atomic nucleus 19873
                atom 19873
                  main group element atom 19763
                    p-block element atom 19763
                      chalcogen 19454
                        oxygen atom 19415
                          oxygen molecular entity 19415
                            hydroxides 19139
                              oxoacid 18273
                                pnictogen oxoacid 10308
                                  phosphorus oxoacid 9228
                                    phosphoric acids 7945
                                      phosphoric acid 7945
                                        phosphoric acid derivative 7624
                                          phosphate 7624
                                            organic phosphate 7623
                                              carbohydrate phosphate 1710
                                                aldonic acid phosphate 6
                                                  phosphoglyceric acid 6
                                                    monophosphoglyceric acid 2
                                                      3-phosphoglyceric acid 2
                                                        3-phospho-D-glyceric acid 0
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