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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:3-phosphoglyceric acid
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Accession:CHEBI:17050 term browser browse the term
Definition:A monophosphoglyceric acid having the phospho group at the 3-position. It is an intermediate in metabolic pathways like glycolysis and calvin cycle.
Synonyms:exact_synonym: 2-hydroxy-3-(phosphonooxy)propanoic acid
 related_synonym: 3-(dihydrogen phosphate)Glycerate;   3-(dihydrogen phosphate)Glyceric acid;   3-Phosphoglycerate;   DL-Glycerate 3-phosphate;   Formula=C3H7O7P;   Glycerate 3-phosphate;   Glyceric acid 3-phosphate;   InChI=1S/C3H7O7P/c4-2(3(5)6)1-10-11(7,8)9/h2,4H,1H2,(H,5,6)(H2,7,8,9);   InChIKey=OSJPPGNTCRNQQC-UHFFFAOYSA-N;   SMILES=OC(COP(O)(O)=O)C(O)=O;   glycerate 3-phosphates
 alt_id: CHEBI:11882;   CHEBI:1659;   CHEBI:24345;   CHEBI:40016
 xref: CAS:820-11-1;   Chemspider:704;   DrugBank:DB04510;   HMDB:HMDB0000807;   KEGG:C00597;   KNApSAcK:C00007286
 xref_mesh: MESH:C005156
 xref: PMID:17439666;   PMID:22735334;   Reaxys:1726829;   Wikipedia:3-Phosphoglyceric_acid
 cyclic_relationship: is_conjugate_acid_of CHEBI:132960;   is_conjugate_acid_of CHEBI:57998;   is_conjugate_acid_of CHEBI:88005



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3-phosphoglyceric acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gapdh glyceraldehyde-3-phosphate dehydrogenase multiple interactions EXP [GAPDH protein co-treated with 3-phosphoglycerate co-treated with NAD] results in increased chemical synthesis of sodium arsenite; [GAPDH protein co-treated with 3-phosphoglycerate co-treated with NAD] results in increased reduction of sodium arsenate analog; heptelidic acid inhibits the reaction [[GAPDH protein co-treated with 3-phosphoglycerate co-treated with NAD] results in increased reduction of sodium arsenate analog] CTD PMID:15788719 NCBI chr 4:157,962,312...157,967,158
Ensembl chr 4:157,962,343...157,966,235
JBrowse link
G Idh2 isocitrate dehydrogenase (NADP(+)) 2 multiple interactions
increases abundance
ISO Triazines inhibits the reaction [IDH2 protein mutant form results in increased abundance of 3-phosphoglycerate] CTD PMID:27469509 NCBI chr 1:134,038,644...134,057,969
Ensembl chr 1:134,029,772...134,058,025
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 20039
    role 19990
      biological role 19989
        biochemical role 19612
          metabolite 19594
            fundamental metabolite 12799
              3-phosphoglyceric acid 2
                3-phospho-D-glyceric acid 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 20039
    subatomic particle 20037
      composite particle 20037
        hadron 20037
          baryon 20037
            nucleon 20037
              atomic nucleus 20037
                atom 20037
                  main group element atom 19938
                    p-block element atom 19938
                      chalcogen 19666
                        oxygen atom 19638
                          oxygen molecular entity 19638
                            hydroxides 19369
                              oxoacid 18670
                                pnictogen oxoacid 10746
                                  phosphorus oxoacid 9742
                                    phosphoric acids 8547
                                      phosphoric acid 8547
                                        phosphoric acid derivative 8249
                                          phosphate 8249
                                            organic phosphate 8248
                                              carbohydrate phosphate 1741
                                                aldonic acid phosphate 6
                                                  phosphoglyceric acid 6
                                                    monophosphoglyceric acid 2
                                                      3-phosphoglyceric acid 2
                                                        3-phospho-D-glyceric acid 0
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