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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:3-phosphoglyceric acid
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Accession:CHEBI:17050 term browser browse the term
Definition:A monophosphoglyceric acid having the phospho group at the 3-position. It is an intermediate in metabolic pathways like glycolysis and calvin cycle.
Synonyms:exact_synonym: 2-hydroxy-3-(phosphonooxy)propanoic acid
 related_synonym: 3-(dihydrogen phosphate)Glycerate;   3-(dihydrogen phosphate)Glyceric acid;   3-Phosphoglycerate;   DL-Glycerate 3-phosphate;   Formula=C3H7O7P;   Glycerate 3-phosphate;   Glyceric acid 3-phosphate;   InChI=1S/C3H7O7P/c4-2(3(5)6)1-10-11(7,8)9/h2,4H,1H2,(H,5,6)(H2,7,8,9);   InChIKey=OSJPPGNTCRNQQC-UHFFFAOYSA-N;   SMILES=OC(COP(O)(O)=O)C(O)=O;   glycerate 3-phosphates
 alt_id: CHEBI:11882;   CHEBI:1659;   CHEBI:24345;   CHEBI:40016
 xref: CAS:820-11-1;   Chemspider:704;   DrugBank:DB04510;   HMDB:HMDB0000807;   KEGG:C00597;   KNApSAcK:C00007286
 xref_mesh: MESH:C005156
 xref: PMID:17439666;   PMID:22735334;   Reaxys:1726829;   Wikipedia:3-Phosphoglyceric_acid
 cyclic_relationship: is_conjugate_acid_of CHEBI:132960;   is_conjugate_acid_of CHEBI:57998;   is_conjugate_acid_of CHEBI:88005


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3-phosphoglyceric acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gapdh glyceraldehyde-3-phosphate dehydrogenase multiple interactions ISO [GAPDH protein co-treated with 3-phosphoglycerate co-treated with NAD] results in increased chemical synthesis of sodium arsenite; [GAPDH protein co-treated with 3-phosphoglycerate co-treated with NAD] results in increased reduction of sodium arsenate analog; heptelidic acid inhibits the reaction [[GAPDH protein co-treated with 3-phosphoglycerate co-treated with NAD] results in increased reduction of sodium arsenate analog] CTD PMID:15788719 NCBI chr 6:125,161,852...125,166,467
Ensembl chr 6:125,161,715...125,166,467
JBrowse link
G Idh2 isocitrate dehydrogenase 2 (NADP+), mitochondrial multiple interactions
increases abundance
EXP Triazines inhibits the reaction [IDH2 protein mutant form results in increased abundance of 3-phosphoglycerate] CTD PMID:27469509 NCBI chr 7:80,094,845...80,118,608
Ensembl chr 7:80,094,846...80,115,392
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 21727
    role 21705
      biological role 21703
        biochemical role 20925
          metabolite 20878
            fundamental metabolite 13142
              3-phosphoglyceric acid 2
                3-phospho-D-glyceric acid 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 21727
    subatomic particle 21713
      composite particle 21713
        hadron 21713
          baryon 21713
            nucleon 21713
              atomic nucleus 21713
                atom 21713
                  main group element atom 21629
                    p-block element atom 21629
                      chalcogen 20758
                        oxygen atom 20736
                          oxygen molecular entity 20736
                            hydroxides 20161
                              oxoacid 19444
                                pnictogen oxoacid 10419
                                  phosphorus oxoacid 9282
                                    phosphoric acids 8015
                                      phosphoric acid 8015
                                        phosphoric acid derivative 7679
                                          phosphate 7679
                                            organic phosphate 7678
                                              carbohydrate phosphate 1712
                                                aldonic acid phosphate 6
                                                  phosphoglyceric acid 6
                                                    monophosphoglyceric acid 2
                                                      3-phosphoglyceric acid 2
                                                        3-phospho-D-glyceric acid 0
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