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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:alpha-D-GalpNAc-(1->3)-[alpha-L-Fucp-(1->2)]-beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->2)-alpha-D-Manp
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Accession:CHEBI:170003 term browser browse the term
Definition:A branched amino pentasaccharide comprising N-acetyl-alpha-D-galactosamine, beta-D-galactose, N-acetyl-beta-D-glucosamine and alpha-D-mannose residues linked sequentially (1->3), (1->4) and (1->2), to the beta-D-galactose residue of which is also linked (1->2) an alpha-L-fucosyl residue.
Synonyms:exact_synonym: 2-acetamido-2-deoxy-alpha-D-galactopyranosyl-(1->3)-[alpha-L-fucopyranosyl-(1->2)]-beta-D-galactopyranosyl-(1->4)-2-acetamido-2-deoxy-beta-D-glucopyranosyl-(1->2)-alpha-D-mannopyranose
 related_synonym: 2-acetamido-2-deoxy-alpha-D-galactopyranosyl-(1->3)-[6-deoxy-alpha-L-galactopyranosyl-(1->2)]-beta-D-galactopyranosyl-(1->4)-2-acetamido-2-deoxy-beta-D-glucopyranosyl-(1->2)-alpha-D-mannopyranose;   Formula=C34H58N2O25;   GalNAca1-3(Fuca1-2)Galb1-4GlcNAcb1-2Mana;   GalNAcalpha1-3(Fucalpha1-2)Galbeta1-4GlcNAcbeta1-2Manalpha;   InChI=1S/C34H58N2O25/c1-8-17(43)23(49)25(51)33(53-8)61-29-27(59-31-15(35-9(2)41)21(47)18(44)12(5-38)55-31)20(46)13(6-39)56-34(29)58-26-14(7-40)57-32(16(22(26)48)36-10(3)42)60-28-24(50)19(45)11(4-37)54-30(28)52/h8,11-34,37-40,43-52H,4-7H2,1-3H3,(H,35,41)(H,36,42)/t8-,11+,12+,13+,14+,15+,16+,17+,18-,19+,20-,21+,22+,23+,24-,25-,26+,27-,28-,29+,30-,31+,32-,33-,34-/m0/s1;   InChIKey=KXKOBCYKVINSRM-XTBLAXQYSA-N;   N-acetyl-alpha-D-galactosaminyl-(1->3)-[alpha-L-fucosyl-(1->2)]-beta-D-galactosyl-(1->4)-N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannose;   SMILES=C[C@@H]1O[C@@H](O[C@H]2[C@H](O[C@H]3[C@H](O)[C@@H](NC(C)=O)[C@H](O[C@@H]4[C@@H](O)O[C@H](CO)[C@@H](O)[C@@H]4O)O[C@@H]3CO)O[C@H](CO)[C@H](O)[C@@H]2O[C@H]2O[C@H](CO)[C@H](O)[C@H](O)[C@H]2NC(C)=O)[C@@H](O)[C@H](O)[C@@H]1O
 xref: PMID:31537530



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  CHEBI ontology 24838
    chemical entity 24808
      atom 24799
        nonmetal atom 24537
          oxygen atom 23693
            oxygen molecular entity 23693
              organooxygen compound 23247
                carbohydrates and carbohydrate derivatives 13169
                  glycan 3318
                    oligosaccharide derivative 142
                      amino oligosaccharide 2
                        galactosamine oligosaccharide 0
                          alpha-D-GalpNAc-(1->3)-[alpha-L-Fucp-(1->2)]-beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->2)-alpha-D-Manp 0
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  CHEBI ontology 24838
    subatomic particle 24799
      composite particle 24799
        hadron 24799
          baryon 24799
            nucleon 24799
              atomic nucleus 24799
                atom 24799
                  main group element atom 24668
                    p-block element atom 24668
                      carbon group element atom 24465
                        carbon atom 24429
                          organic molecular entity 24429
                            heteroorganic entity 23830
                              organochalcogen compound 23399
                                organooxygen compound 23247
                                  carbohydrates and carbohydrate derivatives 13169
                                    carbohydrate 13169
                                      oligosaccharide 571
                                        oligosaccharide derivative 142
                                          amino oligosaccharide 2
                                            galactosamine oligosaccharide 0
                                              alpha-D-GalpNAc-(1->3)-[alpha-L-Fucp-(1->2)]-beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->2)-alpha-D-Manp 0
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