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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term:uridine 5'-monophosphate
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Accession:CHEBI:16695 term browser browse the term
Definition:A pyrimidine ribonucleoside 5'-monophosphate having uracil as the nucleobase.
Synonyms:related_synonym: 5'-UMP;   5'Uridylic acid;   Formula=C9H13N2O9P;   InChI=1S/C9H13N2O9P/c12-5-1-2-11(9(15)10-5)8-7(14)6(13)4(20-8)3-19-21(16,17)18/h1-2,4,6-8,13-14H,3H2,(H,10,12,15)(H2,16,17,18)/t4-,6-,7-,8-/m1/s1;   InChIKey=DJJCXFVJDGTHFX-XVFCMESISA-N;   SMILES=O[C@@H]1[C@@H](COP(O)(O)=O)O[C@H]([C@@H]1O)n1ccc(=O)[nH]c1=O;   UMP;   Uridine monophosphate;   Uridylic acid;   pU;   uridine 5'-(dihydrogen phosphate);   uridine 5'-phosphate;   uridine 5'-phosphoric acid;   uridylate
 alt_id: CHEBI:13508;   CHEBI:13509;   CHEBI:27231;   CHEBI:46362;   CHEBI:46381;   CHEBI:46382;   CHEBI:47721;   CHEBI:9849
 xref: CAS:58-97-9;   DrugBank:DB03685;   Gmelin:310455;   HMDB:HMDB0000288;   KEGG:C00105;   KNApSAcK:C00007311
 xref_mesh: MESH:D014542
 xref: MetaCyc:UMP;   PDBeChem:U5PrF10;   PDBeChem:UrF10;   PMID:22735334;   PMID:2559771;   Reaxys:47486;   Wikipedia:Uridine_monophosphate
 cyclic_relationship: is_conjugate_acid_of CHEBI:57865


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uridine 5'-monophosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bsg basigin decreases expression ISO Uridine Monophosphate results in decreased expression of BSG protein CTD PMID:36574092 NCBI chr 7:10,643,788...10,651,005
Ensembl chr 7:10,643,789...10,651,005 		JBrowse link
sofosbuvir term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Klrc1 killer cell lectin like receptor C1 decreases expression ISO sofosbuvir co-treated with ledipasvir decreased expression of NCR1 protein in natural killer cells RGD PMID:31218578 RGD:40400920 NCBI chr 4:164,828,163...164,838,446
Ensembl chr 4:164,828,163...164,838,464 		JBrowse link
G Ncr1 natural cytotoxicity triggering receptor 1 affects expression ISO sofosbuvir co-treated with ledipasvir affects expression of NCR1 protein in natural killer cells RGD PMID:31218578 RGD:40400920 NCBI chr 1:78,657,409...78,665,255
Ensembl chr 1:78,659,262...78,703,273 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 20849
    role 20820
      biological role 20805
        biochemical role 20268
          metabolite 20237
            prokaryotic metabolite 19156
              bacterial metabolite 19156
                Escherichia coli metabolite 19044
                  uridine 5'-monophosphate 3
                    2'-O-methyluridine 5'-monophosphate + 0
                    5,6-dihydrouridine 5'-monophosphate + 0
                    5-(2-methoxy-2-oxoethyl)uridine 5'-monophosphate + 0
                    5-aminomethyl-2-thiouridine 5'-monophosphate + 0
                    5-bromouridine 5'-monophosphate 0
                    5-carboxymethylaminomethyl-2'-O-methyluridine 5'-monophosphate + 0
                    5-carboxymethylaminomethyluridine 5'-monophosphate + 0
                    5-fluorouridine 5'-monophosphate 0
                    5-methylaminomethyl-2-thiouridine 5'-monophosphate + 0
                    6-oxouridine 5'-phosphate 0
                    N(3)-methyluridine 5'-monophosphate + 0
                    O(4')-(5'-uridylyl)-L-tyrosine 0
                    UMP 3'-end residue + 0
                    UMP 5'-end residue + 0
                    ddhUMP 0
                    sofosbuvir + 2
                    uracil octosyl acid 5'-phosphate 0
                    uridine 5'-monophosphate residue + 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 20849
    subatomic particle 20847
      composite particle 20860
        hadron 20847
          baryon 20860
            nucleon 20847
              atomic nucleus 20847
                atom 20860
                  main group element atom 20781
                    p-block element atom 20768
                      chalcogen 20492
                        oxygen atom 20458
                          oxygen molecular entity 20446
                            hydroxides 20231
                              oxoacid 19291
                                pnictogen oxoacid 15115
                                  phosphorus oxoacid 14671
                                    phosphoric acids 13990
                                      phosphoric acid 13985
                                        phosphoric acid derivative 13902
                                          phosphate 13901
                                            organic phosphate 13901
                                              carbohydrate phosphate 1976
                                                phospho sugar 1819
                                                  aldose phosphate 1813
                                                    aldopentose phosphate 1808
                                                      ribose phosphate 1803
                                                        ribonucleotide 1763
                                                          ribonucleoside 5'-phosphate 765
                                                            ribonucleoside 5'-monophosphate 481
                                                              pyrimidine ribonucleoside 5'-monophosphate 444
                                                                uridine 5'-monophosphate 3
                                                                  2'-O-methyluridine 5'-monophosphate + 0
                                                                  5,6-dihydrouridine 5'-monophosphate + 0
                                                                  5-(2-methoxy-2-oxoethyl)uridine 5'-monophosphate + 0
                                                                  5-aminomethyl-2-thiouridine 5'-monophosphate + 0
                                                                  5-bromouridine 5'-monophosphate 0
                                                                  5-carboxymethylaminomethyl-2'-O-methyluridine 5'-monophosphate + 0
                                                                  5-carboxymethylaminomethyluridine 5'-monophosphate + 0
                                                                  5-fluorouridine 5'-monophosphate 0
                                                                  5-methylaminomethyl-2-thiouridine 5'-monophosphate + 0
                                                                  6-oxouridine 5'-phosphate 0
                                                                  N(3)-methyluridine 5'-monophosphate + 0
                                                                  O(4')-(5'-uridylyl)-L-tyrosine 0
                                                                  UMP 3'-end residue + 0
                                                                  UMP 5'-end residue + 0
                                                                  ddhUMP 0
                                                                  sofosbuvir + 2
                                                                  uracil octosyl acid 5'-phosphate 0
                                                                  uridine 5'-monophosphate residue + 0
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