Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term:atropine
go back to main search page
Accession:CHEBI:16684 term browser browse the term
Definition:A racemate composed of equimolar concentrations of (S)- and (R)-atropine . It is obtained from deadly nightshade (Atropa belladonna) and other plants of the family Solanaceae.
Synonyms:exact_synonym: rac-(3-endo)-8-methyl-8-azabicyclo[3.2.1]oct-3-yl 3-hydroxy-2-phenylpropanoate;   rac-tropan-3alpha-yl 3-hydroxy-2-phenylpropanoate
 related_synonym: (+,-)-tropyl tropate;   (+-)-hyoscyamine;   (3-endo)-8-methyl-8-azabicyclo[3.2.1]oct-3-yl tropate;   8-methyl-8-azabicyclo[3.2.1]oct-3-yl 3-hydroxy-2-phenylpropanoate;   8-methyl-8-azabicyclo[3.2.1]oct-3-yl tropate;   Atropin;   Formula=C17H23NO3;   InChI=1S/C17H23NO3/c1-18-13-7-8-14(18)10-15(9-13)21-17(20)16(11-19)12-5-3-2-4-6-12/h2-6,13-16,19H,7-11H2,1H3/t13-,14+,15+,16?;   InChIKey=RKUNBYITZUJHSG-SPUOUPEWSA-N;   SMILES=CN1[C@H]2CC[C@@H]1C[C@@H](C2)OC(=O)C(CO)c1ccccc1;   [(1S,5R)-8-methyl-8-azabicyclo[3.2.1]oct-3-yl] 3-hydroxy-2-phenyl-propanoate;   atropina;   dl-Hyoscyamine;   dl-tropyltropate;   tropine tropate
 alt_id: CHEBI:13866;   CHEBI:22674;   CHEBI:24754;   CHEBI:2917
 xref: Beilstein:1545928;   Beilstein:4236545;   CAS:51-55-8;   DrugBank:DB00572;   HMDB:HMDB0014712;   KEGG:C01479;   KEGG:D00113
 xref_mesh: MESH:D001285
 xref: PMID:15374592;   PMID:18369575;   Reaxys:1545928


show annotations for term's descendants           Sort by:
Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 5066
    chemical entity 5066
      chemical substance 64
        mixture 58
          racemate 49
            atropine 0
              (6S)-6-hydroxyhyoscyamine 0
              hyoscyamine sulfate dihydrate 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 5066
    subatomic particle 5057
      composite particle 5057
        hadron 5057
          baryon 5057
            nucleon 5057
              atomic nucleus 5057
                atom 5057
                  main group element atom 5026
                    p-block element atom 5023
                      carbon group element atom 4940
                        carbon atom 4939
                          organic molecular entity 4939
                            heteroorganic entity 4779
                              organochalcogen compound 4741
                                organooxygen compound 4703
                                  carbon oxoacid 370
                                    carboxylic acid 366
                                      monocarboxylic acid 207
                                        fatty acid 130
                                          saturated fatty acid 81
                                            propionic acid 10
                                              2-arylpropionic acid 0
                                                hydratropic acid 0
                                                  (S)-hydratropic acid 0
                                                    (R)-tropic acid 0
                                                      (R)-atropine 0
                                                        atropine 0
                                                          (6S)-6-hydroxyhyoscyamine 0
                                                          hyoscyamine sulfate dihydrate 0
paths to the root