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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:allyl alcohol
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Accession:CHEBI:16605 term browser browse the term
Definition:A propenol in which the C=C bond connects C-2 and C-3. It is has been found in garlic (Allium sativum). Formerly used as a herbicide for the control of various grass and weed seeds.
Synonyms:exact_synonym: prop-2-en-1-ol
 related_synonym: 2-Propen-1-ol;   2-Propenol;   2-Propenyl alcohol;   3-Hydroxypropene;   Formula=C3H6O;   InChI=1S/C3H6O/c1-2-3-4/h2,4H,1,3H2;   InChIKey=XXROGKLTLUQVRX-UHFFFAOYSA-N;   SMILES=OCC=C;   Vinyl carbinol;   Vinylcarbinol
 alt_id: CHEBI:13763;   CHEBI:19765;   CHEBI:2604
 xref: CAS:107-18-6;   HMDB:HMDB0031652;   KEGG:C02001
 xref_mesh: MESH:C006463
 xref: MetaCyc:ALLYL-ALCOHOL;   PMID:18383315;   PMID:24594943;   PPDB:2698;   Reaxys:605307;   Wikipedia:Allyl_alcohol


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allyl alcohol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc1 ATP binding cassette subfamily C member 1 increases expression ISO allyl alcohol results in increased expression of ABCC1 mRNA; allyl alcohol results in increased expression of ABCC1 protein CTD PMID:19371622 NCBI chr10:528,961...655,179
Ensembl chr10:531,812...655,114
JBrowse link
G Abcc2 ATP binding cassette subfamily C member 2 increases expression ISO allyl alcohol results in increased expression of ABCC2 protein CTD PMID:19371622 NCBI chr 1:242,664,657...242,723,239
Ensembl chr 1:242,664,657...242,723,238
JBrowse link
G Abcc3 ATP binding cassette subfamily C member 3 increases expression ISO allyl alcohol results in increased expression of ABCC3 mRNA CTD PMID:19371622 NCBI chr10:79,296,681...79,342,749
Ensembl chr10:79,296,693...79,342,595
JBrowse link
G Abcc4 ATP binding cassette subfamily C member 4 increases expression ISO allyl alcohol results in increased expression of ABCC4 mRNA; allyl alcohol results in increased expression of ABCC4 protein CTD PMID:19371622 NCBI chr15:95,541,186...95,774,898
Ensembl chr15:95,542,315...95,774,283
JBrowse link
G Abcc5 ATP binding cassette subfamily C member 5 increases expression ISO allyl alcohol results in increased expression of ABCC5 mRNA; allyl alcohol results in increased expression of ABCC5 protein CTD PMID:19371622 NCBI chr11:80,473,809...80,567,257
Ensembl chr11:80,473,872...80,567,253
JBrowse link
G Abcc6 ATP binding cassette subfamily C member 6 decreases expression ISO allyl alcohol results in decreased expression of ABCC6 mRNA CTD PMID:19371622 NCBI chr 1:96,447,224...96,501,464
Ensembl chr 1:96,447,251...96,501,464
JBrowse link
G Adh1 alcohol dehydrogenase 1 (class I) increases oxidation
multiple interactions
ISO ADH1 protein results in increased oxidation of allyl alcohol
[ADH1 protein results in increased oxidation of allyl alcohol] which results in increased abundance of Acetone
CTD PMID:11981770 NCBI chr 2:226,797,303...226,808,892
Ensembl chr 2:226,797,303...226,808,892
JBrowse link
G Afp alpha-fetoprotein increases expression ISO
EXP
allyl alcohol results in increased expression of AFP protein CTD PMID:61145 PMID:70250 NCBI chr14:17,573,412...17,591,476
Ensembl chr14:17,573,412...17,591,480
JBrowse link
G Bcat1 branched chain amino acid transaminase 1 increases expression EXP allyl alcohol results in increased expression of BCAT1 mRNA CTD PMID:23558518 NCBI chr 4:177,964,834...178,046,573
Ensembl chr 4:177,964,834...178,046,597
JBrowse link
G Ccl2 C-C motif chemokine ligand 2 increases expression ISO allyl alcohol results in increased expression of CCL2 mRNA CTD PMID:21907259 NCBI chr10:67,005,424...67,007,222
Ensembl chr10:67,005,424...67,007,226
JBrowse link
G Cyp2b1 cytochrome P450, family 2, subfamily b, polypeptide 1 increases expression EXP allyl alcohol results in increased expression of CYP2B1 protein CTD PMID:10445401 NCBI chr 1:81,518,387...81,544,999
Ensembl chr 1:81,518,408...81,542,052
JBrowse link
G Cyp2e1 cytochrome P450, family 2, subfamily e, polypeptide 1 increases expression ISO allyl alcohol results in increased expression of CYP2E1 protein CTD PMID:11515535 NCBI chr 1:195,840,330...195,850,728
Ensembl chr 1:195,840,058...195,864,023
JBrowse link
G Cyp3a2 cytochrome P450, family 3, subfamily a, polypeptide 2 decreases expression EXP allyl alcohol results in decreased expression of CYP3A2 protein CTD PMID:10445401 NCBI chr12:9,207,986...9,230,038
Ensembl chr12:9,015,383...9,285,008
JBrowse link
G Gpt glutamic--pyruvic transaminase multiple interactions
increases secretion
increases activity
ISO
EXP
diisopropyl 1,3-dithiol-2-ylidenemalonate inhibits the reaction [allyl alcohol results in increased activity of GPT protein]
allyl alcohol results in increased secretion of GPT protein
1-(5-Isoquinolinesulfonyl)-2-Methylpiperazine inhibits the reaction [allyl alcohol results in increased secretion of GPT protein]; Caffeine promotes the reaction [allyl alcohol results in increased activity of GPT protein]; chelerythrine inhibits the reaction [allyl alcohol results in increased secretion of GPT protein]; fomepizole inhibits the reaction [Caffeine promotes the reaction [allyl alcohol results in increased activity of GPT protein]]; Genistein inhibits the reaction [allyl alcohol results in increased secretion of GPT protein]; rottlerin inhibits the reaction [allyl alcohol results in increased secretion of GPT protein]
CTD PMID:3795300 PMID:11394713 PMID:12755590 NCBI chr 7:108,416,646...108,419,495
Ensembl chr 7:108,416,642...108,419,494
JBrowse link
G Havcr1 hepatitis A virus cellular receptor 1 increases expression ISO allyl alcohol results in increased expression of HAVCR1 mRNA CTD PMID:21907259 NCBI chr10:31,118,667...31,151,730
Ensembl chr10:31,119,088...31,151,698
JBrowse link
G Il1b interleukin 1 beta increases expression EXP allyl alcohol results in increased expression of IL1B mRNA CTD PMID:15135310 NCBI chr 3:116,577,005...116,583,386
Ensembl chr 3:116,577,010...116,583,415
JBrowse link
G Il6 interleukin 6 increases expression EXP allyl alcohol results in increased expression of IL6 mRNA CTD PMID:15135310 NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178
JBrowse link
G Lmcd1 LIM and cysteine-rich domains 1 increases expression EXP allyl alcohol results in increased expression of LMCD1 mRNA CTD PMID:23558518 NCBI chr 4:145,393,153...145,452,049
Ensembl chr 4:145,393,145...145,452,046
JBrowse link
G Mir122 microRNA 122 increases expression EXP allyl alcohol results in increased expression of MIR122 mRNA CTD PMID:23143187 NCBI chr18:58,758,703...58,758,787 JBrowse link
G Nos2 nitric oxide synthase 2 increases expression EXP allyl alcohol results in increased expression of NOS2 mRNA CTD PMID:15135310 NCBI chr10:63,815,308...63,851,208
Ensembl chr10:63,815,308...63,851,210
JBrowse link
G Pcolce procollagen C-endopeptidase enhancer multiple interactions EXP allyl alcohol results in increased expression of and results in increased secretion of PCOLCE protein CTD PMID:26396155 NCBI chr12:19,084,191...19,090,508
Ensembl chr12:19,084,210...19,090,508
JBrowse link
G Prkcd protein kinase C, delta affects localization
increases phosphorylation
multiple interactions
EXP allyl alcohol affects the localization of PRKCD protein
allyl alcohol results in increased phosphorylation of PRKCD protein
fomepizole inhibits the reaction [allyl alcohol affects the localization of PRKCD protein]
CTD PMID:12755590 NCBI chr16:5,769,226...5,807,214
Ensembl chr16:5,769,215...5,799,352
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 increases expression
multiple interactions
EXP allyl alcohol results in increased expression of PTGS2 mRNA
allyl alcohol promotes the reaction [Lipopolysaccharides results in increased expression of PTGS2 mRNA]
CTD PMID:11446826 NCBI chr13:62,164,080...62,169,770
Ensembl chr13:62,163,932...62,172,188
JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit multiple interactions
affects localization
EXP 15-deoxyprostaglandin J2 inhibits the reaction [allyl alcohol affects the localization of RELA protein] CTD PMID:14657518 NCBI chr 1:202,925,001...202,935,484
Ensembl chr 1:202,924,945...202,935,484
JBrowse link
G Slc10a1 solute carrier family 10 member 1 decreases expression ISO allyl alcohol results in decreased expression of SLC10A1 mRNA; allyl alcohol results in decreased expression of SLC10A1 protein CTD PMID:19371622 NCBI chr 6:100,613,045...100,626,670
Ensembl chr 6:100,613,045...100,626,670
JBrowse link
G Slco1a4 solute carrier organic anion transporter family, member 1a4 increases expression ISO allyl alcohol results in increased expression of SLCO1A4 protein CTD PMID:19371622 NCBI chr 4:174,710,004...174,764,810
Ensembl chr 4:174,710,004...175,254,573
JBrowse link
G Slco1b2 solute carrier organic anion transporter family member 1B2 decreases expression ISO allyl alcohol results in decreased expression of SLCO1B2 mRNA; allyl alcohol results in decreased expression of SLCO1B2 protein CTD PMID:19371622 NCBI chr 4:174,551,463...174,619,988
Ensembl chr 4:174,551,480...174,619,981
JBrowse link
G Spp1 secreted phosphoprotein 1 increases expression EXP allyl alcohol results in increased expression of SPP1 mRNA CTD PMID:23558518 NCBI chr14:5,308,885...5,315,120
Ensembl chr14:5,308,885...5,315,162
JBrowse link
G Srxn1 sulfiredoxin 1 increases expression ISO allyl alcohol results in increased expression of SRXN1 protein CTD PMID:27358234 NCBI chr 3:140,604,490...140,610,050
Ensembl chr 3:140,599,608...140,628,448
JBrowse link
G Tgfb1 transforming growth factor, beta 1 increases expression
multiple interactions
EXP allyl alcohol results in increased expression of TGFB1 mRNA
Tamoxifen inhibits the reaction [allyl alcohol results in increased expression of TGFB1 mRNA]
CTD PMID:11063159 PMID:18564211 NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
JBrowse link
G Tgfbr1 transforming growth factor, beta receptor 1 multiple interactions
increases expression
EXP Tamoxifen inhibits the reaction [allyl alcohol results in increased expression of TGFBR1 mRNA] CTD PMID:18564211 NCBI chr 5:61,653,773...61,710,777
Ensembl chr 5:61,653,233...61,710,777
JBrowse link
G Timp1 TIMP metallopeptidase inhibitor 1 increases expression EXP allyl alcohol results in increased expression of TIMP1 mRNA CTD PMID:23558518 NCBI chr  X:1,212,969...1,217,714
Ensembl chr  X:1,212,972...1,217,664
JBrowse link
G Tnf tumor necrosis factor increases expression EXP allyl alcohol results in increased expression of TNF mRNA CTD PMID:15135310 NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
JBrowse link
G Vnn1 vanin 1 increases expression ISO allyl alcohol results in increased expression of VNN1 mRNA CTD PMID:21907259 NCBI chr 1:21,537,084...21,547,395
Ensembl chr 1:21,537,094...21,547,395
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19812
    role 19761
      application 19471
        pesticide 16973
          fungicide 10989
            allyl alcohol 34
              allyl diphosphate 0
              allyl octadecyl oxalate 0
              allyl-UTP 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19812
    subatomic particle 19811
      composite particle 19811
        hadron 19811
          baryon 19811
            nucleon 19811
              atomic nucleus 19811
                atom 19811
                  main group element atom 19708
                    p-block element atom 19708
                      chalcogen 19460
                        oxygen atom 19436
                          oxygen molecular entity 19436
                            hydroxides 19175
                              organic hydroxy compound 18668
                                alcohol 15081
                                  allylic alcohol 957
                                    primary allylic alcohol 668
                                      allyl alcohol 34
                                        allyl diphosphate 0
                                        allyl octadecyl oxalate 0
                                        allyl-UTP 0
paths to the root