Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term:L-citrulline
go back to main search page
Accession:CHEBI:16349 term browser browse the term
Definition:The L-enantiomer of citrulline.
Synonyms:exact_synonym: (2S)-2-amino-5-(carbamoylamino)pentanoic acid;   N(5)-carbamoyl-L-ornithine
 related_synonym: (S)-2-Amino-5-ureidopentanoic acid;   2-Amino-5-ureidovaleric acid;   Cit;   Citrulline;   Formula=C6H13N3O3;   InChI=1S/C6H13N3O3/c7-4(5(10)11)2-1-3-9-6(8)12/h4H,1-3,7H2,(H,10,11)(H3,8,9,12)/t4-/m0/s1;   InChIKey=RHGKLRLOHDJJDR-BYPYZUCNSA-N;   L-2-Amino-5-ureidovaleric acid;   N(5)-(aminocarbonyl)-L-ornithine;   N(delta)-carbamylornithine;   N5-(Aminocarbonyl)ornithine;   N5-carbamoylornithine;   SMILES=N[C@@H](CCCNC(N)=O)C(O)=O;   alpha-amino-delta-ureidovaleric acid;   delta-ureidonorvaline
 alt_id: CHEBI:13092;   CHEBI:21257;   CHEBI:41489;   CHEBI:6203
 xref: Beilstein:1725416;   Beilstein:6055157;   CAS:372-75-8;   DrugBank:DB00155;   Drug_Central:3103;   ECMDB:ECMDB00904;   Gmelin:774677;   HMDB:HMDB0000904;   KEGG:C00327;   KEGG:D07706;   KNApSAcK:C00001348;   MetaCyc:L-CITRULLINE;   PDBeChem:CIR;   PMID:11862757;   PMID:17190852;   PMID:18022291;   PMID:19173225;   PMID:21067832;   PMID:21915076;   PMID:21955999;   PMID:22119809;   PMID:22345866;   PMID:22348173;   PMID:22387109;   PMID:22388927;   PMID:22402328;   PMID:22402472;   PMID:22512552;   Reaxys:1725416;   Wikipedia:Citrulline;   YMDB:YMDB00060
 cyclic_relationship: is_enantiomer_of CHEBI:49007;   is_tautomer_of CHEBI:57743


show annotations for term's descendants           Sort by:
Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19811
    role 19818
      biological role 19785
        hapten 3043
          citrulline 0
            L-citrulline 0
              L-citrulline residue 0
              L-citrulline-d2 0
              N(2)-succinyl-L-citrulline 0
              N-acetyl-L-citrulline 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19811
    subatomic particle 19809
      composite particle 19809
        hadron 19840
          baryon 19809
            nucleon 19809
              atomic nucleus 19809
                atom 19809
                  main group element atom 19759
                    main group molecular entity 19759
                      s-block molecular entity 19628
                        hydrogen molecular entity 19614
                          hydrides 19087
                            inorganic hydride 18091
                              pnictogen hydride 18080
                                nitrogen hydride 17987
                                  azane 17796
                                    ammonia 17795
                                      organic amino compound 17795
                                        amino acid 15943
                                          non-proteinogenic amino acid 3987
                                            non-proteinogenic alpha-amino acid 3792
                                              citrullines 0
                                                citrulline 0
                                                  L-citrulline 0
                                                    L-citrulline residue 0
                                                    L-citrulline-d2 0
                                                    N(2)-succinyl-L-citrulline 0
                                                    N-acetyl-L-citrulline 0
paths to the root