Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:D-xylulose 5-phosphate
go back to main search page
Accession:CHEBI:16332 term browser browse the term
Definition:The D-enantiomer of xylulose 5-phosphate.
Synonyms:exact_synonym: D-threo-pentos-2-ulose 5-(dihydrogen phosphate);   D-xylulose 5-(dihydrogen phosphate)
 related_synonym: 5-O-phosphono-D-threo-pentos-2-ulose;   5-O-phosphono-D-xylulose;   Formula=C5H11O8P;   InChI=1S/C5H11O8P/c6-1-3(7)5(9)4(8)2-13-14(10,11)12/h4-6,8-9H,1-2H2,(H2,10,11,12)/t4-,5-/m1/s1;   InChIKey=FNZLKVNUWIIPSJ-RFZPGFLSSA-N;   SMILES=OCC(=O)[C@@H](O)[C@H](O)COP(O)(O)=O
 alt_id: CHEBI:13036;   CHEBI:21121;   CHEBI:4269
 xref: Beilstein:1913425;   CAS:60802-29-1;   KEGG:C00231;   KNApSAcK:C00019693
 xref_mesh: MESH:C031625
 xref: Reaxys:1913425
 cyclic_relationship: is_conjugate_acid_of CHEBI:57737;   is_enantiomer_of CHEBI:16593


show annotations for term's descendants           Sort by:
 
D-xylulose 5-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Taldo1 transaldolase 1 increases abundance ISO TALDO1 gene mutant form results in increased abundance of xylulose-5-phosphate CTD PMID:19436114 NCBI chr 1:214,375,555...214,385,886
Ensembl chr 1:214,375,515...214,385,885
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19810
    role 19758
      biological role 19758
        biochemical role 19304
          metabolite 19285
            fundamental metabolite 12625
              xylulose 5-phosphate 1
                D-xylulose 5-phosphate 1
Path 2
Term Annotations click to browse term
  CHEBI ontology 19810
    subatomic particle 19808
      composite particle 19808
        hadron 19808
          baryon 19808
            nucleon 19808
              atomic nucleus 19808
                atom 19808
                  main group element atom 19696
                    p-block element atom 19696
                      chalcogen 19391
                        oxygen atom 19353
                          oxygen molecular entity 19353
                            hydroxides 19103
                              oxoacid 18235
                                pnictogen oxoacid 10181
                                  phosphorus oxoacid 9072
                                    phosphoric acids 7831
                                      phosphoric acid 7831
                                        phosphoric acid derivative 7511
                                          phosphate 7511
                                            organic phosphate 7510
                                              carbohydrate phosphate 1536
                                                phospho sugar 1462
                                                  ketose phosphate 8
                                                    ketopentose phosphate 1
                                                      xylulose phosphate 1
                                                        xylulose 5-phosphate 1
                                                          D-xylulose 5-phosphate 1
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.