Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:phytanic acid
go back to main search page
Accession:CHEBI:16285 term browser browse the term
Definition:A branched-chain saturated fatty acid consisting of hexadecanoic acid carrying methyl substituents at positions 3, 7, 11 and 15.
Synonyms:exact_synonym: 3,7,11,15-tetramethylhexadecanoic acid
 related_synonym: 3,7,11,15-Tetramethyl-hexadecansaeure;   3,7,11,15-tetramethyl-hexadecanoic acid;   Formula=C20H40O2;   InChI=1S/C20H40O2/c1-16(2)9-6-10-17(3)11-7-12-18(4)13-8-14-19(5)15-20(21)22/h16-19H,6-15H2,1-5H3,(H,21,22);   InChIKey=RLCKHJSFHOZMDR-UHFFFAOYSA-N;   SMILES=CC(C)CCCC(C)CCCC(C)CCCC(C)CC(O)=O
 alt_id: CHEBI:26111;   CHEBI:8189
 xref: Beilstein:1789963;   CAS:14721-66-5;   KEGG:C01607;   LIPID_MAPS_instance:LMFA01020251
 xref_mesh: MESH:D010831
 xref: PMID:12187408;   PMID:17956237;   PMID:9819701;   Reaxys:1789963
 cyclic_relationship: is_conjugate_acid_of CHEBI:37257


show annotations for term's descendants           Sort by:
 
phytanic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FABP1 fatty acid binding protein 1 affects binding
increases expression
multiple interactions
ISO Phytanic Acid binds to FABP1 protein
Phytanic Acid results in increased expression of FABP1 mRNA; Phytanic Acid results in increased expression of FABP1 protein
PPARA protein affects the reaction [Phytanic Acid results in increased expression of FABP1 mRNA]
CTD PMID:10191295 NCBI chr 2:88,122,982...88,128,062
Ensembl chr 2:88,122,982...88,128,062
JBrowse link
G PPARA peroxisome proliferator activated receptor alpha multiple interactions
affects binding
ISO
EXP
PPARA protein affects the reaction [Phytanic Acid results in increased expression of FABP1 mRNA]
Phytanic Acid binds to PPARA protein
CTD PMID:10191295 PMID:23843199 NCBI chr22:46,150,526...46,243,756
Ensembl chr22:46,150,521...46,243,756
JBrowse link
G PPARD peroxisome proliferator activated receptor delta affects binding EXP Phytanic Acid binds to PPARB protein CTD PMID:23843199 NCBI chr 6:35,342,558...35,428,180
Ensembl chr 6:35,342,558...35,428,191
JBrowse link
G PPARG peroxisome proliferator activated receptor gamma affects binding EXP Phytanic Acid binds to PPARG protein CTD PMID:23843199 NCBI chr 3:12,287,368...12,434,344
Ensembl chr 3:12,287,368...12,434,356
JBrowse link
G RXRB retinoid X receptor beta affects binding EXP Phytanic Acid binds to RXRB protein CTD PMID:11939783 NCBI chr 6:33,193,588...33,200,991
Ensembl chr 6:33,193,588...33,200,665
Ensembl chr 6:33,193,588...33,200,665
JBrowse link
G SCP2 sterol carrier protein 2 affects degradation ISO SCP2 protein affects the degradation of Phytanic Acid CTD PMID:10191295 NCBI chr 1:52,927,276...53,051,698
Ensembl chr 1:52,927,276...53,051,698
JBrowse link
2-hydroxyphytanic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RXRA retinoid X receptor alpha affects binding EXP 2-hydroxyphytanic acid binds to RXRA protein CTD PMID:23843199 NCBI chr 9:134,326,455...134,440,585
Ensembl chr 9:134,317,098...134,440,585
JBrowse link
G RXRB retinoid X receptor beta affects binding EXP 2-hydroxyphytanic acid binds to RXRB protein CTD PMID:23843199 NCBI chr 6:33,193,588...33,200,991
Ensembl chr 6:33,193,588...33,200,665
Ensembl chr 6:33,193,588...33,200,665
JBrowse link
G RXRG retinoid X receptor gamma affects binding EXP 2-hydroxyphytanic acid binds to RXRG protein CTD PMID:23843199 NCBI chr 1:165,400,922...165,445,126
Ensembl chr 1:165,400,922...165,445,355
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 24371
    role 24282
      biological role 24249
        biochemical role 23626
          metabolite 23543
            eukaryotic metabolite 23271
              plant metabolite 19852
                hexadecanoic acid 541
                  phytanic acid 8
                    2-hydroxyphytanic acid + 3
                    2-oxophytanic acid 0
                    omega-hydroxyphytanic acid 0
                    phytanoyl-CoA + 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 24371
    subatomic particle 24328
      composite particle 24328
        hadron 24328
          baryon 24328
            nucleon 24328
              atomic nucleus 24328
                atom 24328
                  main group element atom 24177
                    p-block element atom 24177
                      carbon group element atom 23955
                        carbon atom 23913
                          organic molecular entity 23913
                            organic group 22187
                              organic divalent group 22161
                                organodiyl group 22161
                                  carbonyl group 22144
                                    carbonyl compound 22144
                                      carboxylic acid 21184
                                        monocarboxylic acid 20069
                                          fatty acid 18318
                                            saturated fatty acid 18296
                                              straight-chain saturated fatty acid 17263
                                                hexadecanoic acid 541
                                                  phytanic acid 8
                                                    2-hydroxyphytanic acid + 3
                                                    2-oxophytanic acid 0
                                                    omega-hydroxyphytanic acid 0
                                                    phytanoyl-CoA + 0
paths to the root