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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:phytanic acid
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Accession:CHEBI:16285 term browser browse the term
Definition:A branched-chain saturated fatty acid consisting of hexadecanoic acid carrying methyl substituents at positions 3, 7, 11 and 15.
Synonyms:exact_synonym: 3,7,11,15-tetramethylhexadecanoic acid
 related_synonym: 3,7,11,15-Tetramethyl-hexadecansaeure;   3,7,11,15-tetramethyl-hexadecanoic acid;   Formula=C20H40O2;   InChI=1S/C20H40O2/c1-16(2)9-6-10-17(3)11-7-12-18(4)13-8-14-19(5)15-20(21)22/h16-19H,6-15H2,1-5H3,(H,21,22);   InChIKey=RLCKHJSFHOZMDR-UHFFFAOYSA-N;   SMILES=CC(C)CCCC(C)CCCC(C)CCCC(C)CC(O)=O
 alt_id: CHEBI:26111;   CHEBI:8189
 xref: Beilstein:1789963;   CAS:14721-66-5;   KEGG:C01607;   LIPID_MAPS_instance:LMFA01020251
 xref_mesh: MESH:D010831
 xref: PMID:12187408;   PMID:17956237;   PMID:9819701;   Reaxys:1789963
 cyclic_relationship: is_conjugate_acid_of CHEBI:37257


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phytanic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fabp1 fatty acid binding protein 1 affects binding
multiple interactions
increases expression
ISO Phytanic Acid binds to FABP1 protein
PPARA protein affects the reaction [Phytanic Acid results in increased expression of FABP1 mRNA]
Phytanic Acid results in increased expression of FABP1 mRNA; Phytanic Acid results in increased expression of FABP1 protein
CTD PMID:10191295 NCBI chr 4:103,191,015...103,194,791
Ensembl chr 4:103,191,006...103,194,788
JBrowse link
G Ppara peroxisome proliferator activated receptor alpha multiple interactions
affects binding
ISO PPARA protein affects the reaction [Phytanic Acid results in increased expression of FABP1 mRNA]
Phytanic Acid binds to PPARA protein
CTD PMID:10191295 PMID:23843199 NCBI chr 7:116,832,405...116,900,878
Ensembl chr 7:116,832,756...116,895,346
JBrowse link
G Ppard peroxisome proliferator-activated receptor delta affects binding ISO Phytanic Acid binds to PPARB protein CTD PMID:23843199 NCBI chr20:6,298,785...6,363,970
Ensembl chr20:6,298,785...6,363,968
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma affects binding ISO Phytanic Acid binds to PPARG protein CTD PMID:23843199 NCBI chr 4:148,423,102...148,548,471
Ensembl chr 4:148,423,194...148,548,468
JBrowse link
G Rxrb retinoid X receptor beta affects binding ISO Phytanic Acid binds to RXRB protein CTD PMID:11939783 NCBI chr20:4,816,813...4,823,267
Ensembl chr20:4,816,815...4,828,773
JBrowse link
G Scp2 sterol carrier protein 2 affects degradation ISO SCP2 protein affects the degradation of Phytanic Acid CTD PMID:10191295 NCBI chr 5:122,806,949...122,881,259
Ensembl chr 5:122,776,549...122,881,287
JBrowse link
2-hydroxyphytanic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rxra retinoid X receptor alpha affects binding ISO 2-hydroxyphytanic acid binds to RXRA protein CTD PMID:23843199 NCBI chr 3:10,989,832...11,076,366
Ensembl chr 3:10,989,832...11,073,712
JBrowse link
G Rxrb retinoid X receptor beta affects binding ISO 2-hydroxyphytanic acid binds to RXRB protein CTD PMID:23843199 NCBI chr20:4,816,813...4,823,267
Ensembl chr20:4,816,815...4,828,773
JBrowse link
G Rxrg retinoid X receptor gamma affects binding ISO 2-hydroxyphytanic acid binds to RXRG protein CTD PMID:23843199 NCBI chr13:79,743,430...79,785,173
Ensembl chr13:79,743,563...79,785,167
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19812
    role 19761
      biological role 19761
        biochemical role 19381
          metabolite 19356
            eukaryotic metabolite 19044
              plant metabolite 17455
                hexadecanoic acid 590
                  phytanic acid 8
                    2-hydroxyphytanic acid + 3
                    2-oxophytanic acid 0
                    omega-hydroxyphytanic acid 0
                    phytanoyl-CoA + 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19812
    subatomic particle 19811
      composite particle 19811
        hadron 19811
          baryon 19811
            nucleon 19811
              atomic nucleus 19811
                atom 19811
                  main group element atom 19708
                    p-block element atom 19708
                      carbon group element atom 19630
                        carbon atom 19620
                          organic molecular entity 19620
                            organic group 18728
                              organic divalent group 18719
                                organodiyl group 18719
                                  carbonyl group 18667
                                    carbonyl compound 18667
                                      carboxylic acid 18364
                                        monocarboxylic acid 17632
                                          fatty acid 16012
                                            saturated fatty acid 15986
                                              straight-chain saturated fatty acid 15442
                                                hexadecanoic acid 590
                                                  phytanic acid 8
                                                    2-hydroxyphytanic acid + 3
                                                    2-oxophytanic acid 0
                                                    omega-hydroxyphytanic acid 0
                                                    phytanoyl-CoA + 0
paths to the root