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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:cyclopentanol
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Accession:CHEBI:16133 term browser browse the term
Definition:The simplest member of the class of cyclopentanols bearing a single hydroxy substituent. The parent of the class of cyclopentanols.
Synonyms:related_synonym: Cyclopentyl alcohol;   Formula=C5H10O;   Hydroxycyclopentane;   InChI=1S/C5H10O/c6-5-3-1-2-4-5/h5-6H,1-4H2;   InChIKey=XCIXKGXIYUWCLL-UHFFFAOYSA-N;   SMILES=OC1CCCC1
 alt_id: CHEBI:14057;   CHEBI:23494;   CHEBI:4022
 xref: CAS:96-41-3;   KEGG:C02020
 xref_mesh: MESH:C016327
 xref: MetaCyc:CYCLOPENTANOL;   PMID:22145629;   PMID:24273356;   Reaxys:1900556;   Wikipedia:Cyclopentanol


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cyclopentanol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1c2 aldo-keto reductase family 1, member C2 increases oxidation ISO AKR1C2 protein results in increased oxidation of cyclopentanol CTD PMID:23261716 NCBI chr17:69,388,337...69,435,160
Ensembl chr17:69,388,335...69,404,341
JBrowse link
G Akr1c3 aldo-keto reductase family 1, member C3 increases oxidation ISO AKR1C3 protein results in increased oxidation of cyclopentanol CTD PMID:23261716 NCBI chr17:69,761,126...69,778,021
Ensembl chr17:69,761,118...69,778,021
JBrowse link
G Il1b interleukin 1 beta decreases expression ISO cyclopentanol results in decreased expression of IL1B protein CTD PMID:29953848 NCBI chr 3:121,876,256...121,882,637
Ensembl chr 3:121,876,263...121,882,726
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19781
    chemical entity 19781
      molecular entity 19779
        polyatomic entity 19698
          heteroatomic molecular entity 19629
            hydroxides 19087
              organic hydroxy compound 18659
                alcohol 15031
                  cyclopentanols 43
                    cyclopentanol 3
Path 2
Term Annotations click to browse term
  CHEBI ontology 19781
    subatomic particle 19779
      composite particle 19779
        hadron 19779
          baryon 19779
            nucleon 19779
              atomic nucleus 19779
                atom 19779
                  main group element atom 19669
                    p-block element atom 19669
                      carbon group element atom 19588
                        carbon atom 19578
                          organic molecular entity 19578
                            organic molecule 19510
                              organic cyclic compound 19337
                                carbocyclic compound 18300
                                  cyclopentanes 213
                                    cyclopentanols 43
                                      cyclopentanol 3
paths to the root