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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term:berberine
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Accession:CHEBI:16118 term browser browse the term
Definition:A botanical anti-fungal agent that has formula C20H18NO4.
Synonyms:exact_synonym: 9,10-dimethoxy-5,6-dihydro[1,3]dioxolo[4,5-g]isoquino[3,2-a]isoquinolin-7-ium
 related_synonym: 5,6-dihydro-9,10-dimethoxy-1,3-benzodioxolo[5,6-a]benzo[g]quinolizinium;   7,8,13,13a-tetradehydro-9,10-dimethoxy-2,3-[methylenebis(oxy)]berbinium;   9,10-dimethoxy-2,3-(methylenedioxy)-7,8,13,13a-tetradehydroberbinium;   Berberin;   Formula=C20H18NO4;   InChI=1S/C20H18NO4/c1-22-17-4-3-12-7-16-14-9-19-18(24-11-25-19)8-13(14)5-6-21(16)10-15(12)20(17)23-2/h3-4,7-10H,5-6,11H2,1-2H3/q+1;   InChIKey=YBHILYKTIRIUTE-UHFFFAOYSA-N;   SMILES=COc1ccc2cc3-c4cc5OCOc5cc4CC[n+]3cc2c1OC;   Umbellatine
 alt_id: CHEBI:13893;   CHEBI:22753;   CHEBI:3066;   CHEBI:41098
 xref: Beilstein:3570374;   CAS:2086-83-1;   Chemspider:2263;   DrugBank:DB04115;   FooDB:FDB023165;   HMDB:HMDB0003409;   KEGG:C00757;   KNApSAcK:C00001819;   LINCS:LSM-6553
 xref_mesh: MESH:D001599
 xref: MetaCyc:BERBERINE;   PDBeChem:BER;   PMID:11860742;   PMID:12232209;   PMID:12428952;   PMID:12433089;   PMID:12468268;   PMID:15040083;   PMID:15531889;   PMID:15739507;   PMID:15768991;   PMID:16379555;   PMID:16448624;   PMID:16505103;   PMID:17089049;   PMID:17295371;   PMID:17531424;   PMID:18537696;   PMID:19014947;   PMID:19336898;   PMID:19640223;   PMID:19652370;   PMID:19704371;   PMID:20471843;   PMID:20847417;   PMID:21401114;   PMID:21420512;   PMID:21500372;   PMID:21661731;   PMID:23231038;   PMID:26167392;   PMID:8730735;   Pesticides:berberine;   Wikipedia:Berberine


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Path 1
Term Annotations click to browse term
  CHEBI ontology 499
    role 499
      chemical role 425
        antioxidant 43
          berberine 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 499
    subatomic particle 499
      composite particle 499
        hadron 499
          baryon 499
            nucleon 499
              atomic nucleus 499
                atom 499
                  main group element atom 492
                    p-block element atom 492
                      carbon group element atom 481
                        carbon atom 480
                          organic molecular entity 480
                            organic molecule 471
                              organic cyclic compound 454
                                organic heterocyclic compound 417
                                  organonitrogen heterocyclic compound 374
                                    dibenzoquinolizine 0
                                      berberine alkaloid 0
                                        berberine 0
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