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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:ribitol
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Accession:CHEBI:15963 term browser browse the term
Definition:A pentitol (five-carbon sugar alcohol) having meso-configuration, being derived from ribose by reduction of the carbonyl group. It occurs naturally in the plant Adonis vernalis.
Synonyms:exact_synonym: meso-ribitol
 related_synonym: (2R,3s,4S)-pentane-1,2,3,4,5-pentol;   Adonitol;   D-Adonitol;   D-ribitol;   Formula=C5H12O5;   InChI=1S/C5H12O5/c6-1-3(8)5(10)4(9)2-7/h3-10H,1-2H2/t3-,4+,5-;   InChIKey=HEBKCHPVOIAQTA-ZXFHETKHSA-N;   L-ribitol;   SMILES=OC[C@H](O)[C@H](O)[C@H](O)CO
 alt_id: CHEBI:15043;   CHEBI:21074;   CHEBI:26552;   CHEBI:27854;   CHEBI:4230;   CHEBI:48505;   CHEBI:57591;   CHEBI:8841
 xref: Beilstein:1720524;   CAS:488-81-3;   Gmelin:82894;   HMDB:HMDB0000508;   KEGG:C00474;   KNApSAcK:C00001171
 xref_mesh: MESH:D012255
 xref: MetaCyc:RIBITOL;   PMID:15234337;   PMID:16664320;   PMID:16901854;   PMID:17336832;   PMID:17979222;   PMID:23564164;   PMID:24643482;   PMID:25108762;   Reaxys:1720524;   Wikipedia:Ribitol


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ribitol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Taldo1 transaldolase 1 increases abundance ISO TALDO1 gene mutant form results in increased abundance of Ribitol CTD PMID:19436114 NCBI chr 1:214,375,555...214,385,886
Ensembl chr 1:214,375,515...214,385,885
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Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19787
    role 19734
      biological role 19734
        biochemical role 19282
          metabolite 19263
            eukaryotic metabolite 18908
              plant metabolite 17360
                ribitol 1
                  1-deoxy-1-[(5-nitro-2,6-dioxo-1,2,3,6-tetrahydropyrimidin-4-yl)amino]-D-ribitol 0
                  1-deoxy-1-[(5-nitroso-2,6-dioxo-1,2,3,6-tetrahydropyrimidin-4-yl)amino]-D-ribito 0
                  1-deoxy-1-\{[2,6-dihydroxy-5-(5-phosphonopentyl)pyrimidin-4-yl]amino\}-D-ribitol 0
                  1-deoxy-1-\{[2,6-dioxo-5-(5-phosphonopentyl)-1,2,3,6-tetrahydropyrimidin-4-yl]amino\}-D-ribitol 0
                  2-amino-6,7-dimethyl-4-oxo-8-(1'-D-ribityl)-4,8-dihydropteridine 0
                  5-amino-5-(4-hydroxybenzyl)-6-(D-ribitylimino)-5,6-dihydrouracil 0
                  5-amino-6-(D-ribitylamino)uracil 0
                  6,7-dimethyl-8-(1-D-ribityl)lumazine 0
                  6-(hydroxymethyl)-8-(1-D-ribityl)lumazine 0
                  6-methyl-7-oxo-8-(1-D-ribityl)lumazine (2-hydroxy tautomer) 0
                  6-methyl-7-oxo-8-(1-D-ribityl)lumazine (2-oxo tautomer) 0
                  6-methyl-7-oxo-8-(1-D-ribityl)lumazine (2-oxo tautomer)(1-) 0
                  7-hydroxy-6-methyl-8-(1-D-ribityl)lumazine 0
                  8-(1,2-dideoxy-1-D-ribityl)-7-methyllumazine 0
                  8-(1,4-dideoxy-1-D-ribityl)-6-methyllumazine 0
                  8-(1,4-dideoxy-1-D-ribityl)-7-methyllumazine 0
                  8-(1,5-dideoxy-1-D-ribityl)-7-methyllumazine 0
                  8-(5-hydroxypentyl)-7-methyllumazine 0
                  D-ribitol 1-phosphate 0
                  D-ribitol 5-phosphate + 0
                  D-ribitol-(5-P-2)-alpha-D-Galp-(1->3)-alpha-D-Glcp 0
                  [3)-beta-D-ribosyl-(1->1)-D-ribitol-5-P-(O->]3 0
                  alpha-D-Galp-(1->3)-alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->3)-D-ribitol 0
                  alpha-D-Galp-(1->3)-alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->3)-D-ribitol-5-phosphate 0
                  alpha-D-Galp-(1->3)-alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->4)-D-ribitol 0
                  alpha-D-Galp-(1->3)-alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->4)-D-ribitol-5-phosphate 0
                  alpha-D-Glcp-(1->3)-alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->3)-D-ribitol 0
                  alpha-D-Glcp-(1->3)-alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->3)-D-ribitol-5-phosphate 0
                  alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->3)-D-ribitol 0
                  alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->4)-D-ribitol 0
                  alpha-L-Rhap-(1->3)-D-ribitol 0
                  alpha-L-Rhap-(1->4)-D-ribitol 0
                  alpha-L-Rhap-(1->4)-D-ribitol-(5-P-2)-alpha-D-Galp-(1->3)-alpha-D-Glcp 0
                  alpha-L-Rhap-(1->4)-D-ribitol-5-phosphate 0
                  beta-D-ribosyl-(1->1)-D-ribitol-5-phosphate + 0
                  reduced 6-(hydroxymethyl)-8-(1-D-ribityl)lumazine 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19787
    subatomic particle 19784
      composite particle 19784
        hadron 19784
          baryon 19784
            nucleon 19784
              atomic nucleus 19784
                atom 19784
                  main group element atom 19672
                    p-block element atom 19672
                      carbon group element atom 19574
                        carbon atom 19563
                          organic molecular entity 19563
                            heteroorganic entity 19148
                              organochalcogen compound 18856
                                organooxygen compound 18778
                                  carbohydrates and carbohydrate derivatives 12180
                                    carbohydrate 12180
                                      alditol 1871
                                        pentitol 51
                                          ribitol 1
                                            1-deoxy-1-[(5-nitro-2,6-dioxo-1,2,3,6-tetrahydropyrimidin-4-yl)amino]-D-ribitol 0
                                            1-deoxy-1-[(5-nitroso-2,6-dioxo-1,2,3,6-tetrahydropyrimidin-4-yl)amino]-D-ribito 0
                                            1-deoxy-1-\{[2,6-dihydroxy-5-(5-phosphonopentyl)pyrimidin-4-yl]amino\}-D-ribitol 0
                                            1-deoxy-1-\{[2,6-dioxo-5-(5-phosphonopentyl)-1,2,3,6-tetrahydropyrimidin-4-yl]amino\}-D-ribitol 0
                                            2-amino-6,7-dimethyl-4-oxo-8-(1'-D-ribityl)-4,8-dihydropteridine 0
                                            5-amino-5-(4-hydroxybenzyl)-6-(D-ribitylimino)-5,6-dihydrouracil 0
                                            5-amino-6-(D-ribitylamino)uracil 0
                                            6,7-dimethyl-8-(1-D-ribityl)lumazine 0
                                            6-(hydroxymethyl)-8-(1-D-ribityl)lumazine 0
                                            6-methyl-7-oxo-8-(1-D-ribityl)lumazine (2-hydroxy tautomer) 0
                                            6-methyl-7-oxo-8-(1-D-ribityl)lumazine (2-oxo tautomer) 0
                                            6-methyl-7-oxo-8-(1-D-ribityl)lumazine (2-oxo tautomer)(1-) 0
                                            7-hydroxy-6-methyl-8-(1-D-ribityl)lumazine 0
                                            8-(1,2-dideoxy-1-D-ribityl)-7-methyllumazine 0
                                            8-(1,4-dideoxy-1-D-ribityl)-6-methyllumazine 0
                                            8-(1,4-dideoxy-1-D-ribityl)-7-methyllumazine 0
                                            8-(1,5-dideoxy-1-D-ribityl)-7-methyllumazine 0
                                            8-(5-hydroxypentyl)-7-methyllumazine 0
                                            D-ribitol 1-phosphate 0
                                            D-ribitol 5-phosphate + 0
                                            D-ribitol-(5-P-2)-alpha-D-Galp-(1->3)-alpha-D-Glcp 0
                                            [3)-beta-D-ribosyl-(1->1)-D-ribitol-5-P-(O->]3 0
                                            alpha-D-Galp-(1->3)-alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->3)-D-ribitol 0
                                            alpha-D-Galp-(1->3)-alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->3)-D-ribitol-5-phosphate 0
                                            alpha-D-Galp-(1->3)-alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->4)-D-ribitol 0
                                            alpha-D-Galp-(1->3)-alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->4)-D-ribitol-5-phosphate 0
                                            alpha-D-Glcp-(1->3)-alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->3)-D-ribitol 0
                                            alpha-D-Glcp-(1->3)-alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->3)-D-ribitol-5-phosphate 0
                                            alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->3)-D-ribitol 0
                                            alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->4)-D-ribitol 0
                                            alpha-L-Rhap-(1->3)-D-ribitol 0
                                            alpha-L-Rhap-(1->4)-D-ribitol 0
                                            alpha-L-Rhap-(1->4)-D-ribitol-(5-P-2)-alpha-D-Galp-(1->3)-alpha-D-Glcp 0
                                            alpha-L-Rhap-(1->4)-D-ribitol-5-phosphate 0
                                            beta-D-ribosyl-(1->1)-D-ribitol-5-phosphate + 0
                                            reduced 6-(hydroxymethyl)-8-(1-D-ribityl)lumazine 0
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