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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term:ribitol
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Accession:CHEBI:15963 term browser browse the term
Definition:A pentitol (five-carbon sugar alcohol) having meso-configuration, being derived from ribose by reduction of the carbonyl group. It occurs naturally in the plant Adonis vernalis.
Synonyms:exact_synonym: meso-ribitol
 related_synonym: (2R,3s,4S)-pentane-1,2,3,4,5-pentol;   Adonitol;   D-Adonitol;   D-Ribitol;   Formula=C5H12O5;   InChI=1S/C5H12O5/c6-1-3(8)5(10)4(9)2-7/h3-10H,1-2H2/t3-,4+,5-;   InChIKey=HEBKCHPVOIAQTA-ZXFHETKHSA-N;   L-ribitol;   SMILES=OC[C@H](O)[C@H](O)[C@H](O)CO
 alt_id: CHEBI:15043;   CHEBI:21074;   CHEBI:26552;   CHEBI:27854;   CHEBI:4230;   CHEBI:48505;   CHEBI:57591;   CHEBI:8841
 xref: Beilstein:1720524;   CAS:488-81-3;   Gmelin:82894;   HMDB:HMDB0000508;   KEGG:C00474;   KNApSAcK:C00001171
 xref_mesh: MESH:D012255
 xref: MetaCyc:RIBITOL;   PMID:15234337;   PMID:16664320;   PMID:16901854;   PMID:17336832;   PMID:17979222;   PMID:23564164;   PMID:24643482;   PMID:25108762;   Reaxys:1720524;   Wikipedia:Ribitol


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ribitol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Taldo1 transaldolase 1 increases abundance ISO TALDO1 gene mutant form results in increased abundance of Ribitol CTD PMID:19436114 NCBI chr 1:196,493,634...196,503,965
Ensembl chr 1:196,493,589...196,503,974 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19751
    role 19724
      biological role 19722
        biochemical role 19443
          metabolite 19430
            eukaryotic metabolite 19227
              plant metabolite 17860
                ribitol 1
                  1-deoxy-1-[(5-nitro-2,6-dioxo-1,2,3,6-tetrahydropyrimidin-4-yl)amino]-D-ribitol 0
                  1-deoxy-1-[(5-nitroso-2,6-dioxo-1,2,3,6-tetrahydropyrimidin-4-yl)amino]-D-ribito 0
                  1-deoxy-1-\{[2,6-dihydroxy-5-(5-phosphonopentyl)pyrimidin-4-yl]amino\}-D-ribitol 0
                  1-deoxy-1-\{[2,6-dioxo-5-(5-phosphonopentyl)-1,2,3,6-tetrahydropyrimidin-4-yl]amino\}-D-ribitol 0
                  2-amino-6,7-dimethyl-4-oxo-8-(1'-D-ribityl)-4,8-dihydropteridine 0
                  5-amino-5-(4-hydroxybenzyl)-6-(D-ribitylimino)-5,6-dihydrouracil 0
                  5-amino-6-(D-ribitylamino)uracil 0
                  6,7-dimethyl-8-(1-D-ribityl)lumazine 0
                  6-(hydroxymethyl)-8-(1-D-ribityl)lumazine 0
                  6-methyl-7-oxo-8-(1-D-ribityl)lumazine (2-hydroxy tautomer) 0
                  6-methyl-7-oxo-8-(1-D-ribityl)lumazine (2-oxo tautomer) 0
                  6-methyl-7-oxo-8-(1-D-ribityl)lumazine (2-oxo tautomer)(1-) 0
                  7-hydroxy-6-methyl-8-(1-D-ribityl)lumazine 0
                  8-(1,2-dideoxy-1-D-ribityl)-7-methyllumazine 0
                  8-(1,4-dideoxy-1-D-ribityl)-6-methyllumazine 0
                  8-(1,4-dideoxy-1-D-ribityl)-7-methyllumazine 0
                  8-(1,5-dideoxy-1-D-ribityl)-7-methyllumazine 0
                  8-(5-hydroxypentyl)-7-methyllumazine 0
                  D-ribitol 1-phosphate 0
                  D-ribitol 5-phosphate + 0
                  D-ribitol-(5-P-2)-alpha-D-Galp-(1->3)-alpha-D-Glcp 0
                  [3)-beta-D-ribosyl-(1->1)-D-ribitol-5-P-(O->]3 0
                  alpha-D-Galp-(1->3)-alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->3)-D-ribitol 0
                  alpha-D-Galp-(1->3)-alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->3)-D-ribitol-5-phosphate 0
                  alpha-D-Galp-(1->3)-alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->4)-D-ribitol 0
                  alpha-D-Galp-(1->3)-alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->4)-D-ribitol-5-phosphate 0
                  alpha-D-Glcp-(1->3)-alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->3)-D-ribitol 0
                  alpha-D-Glcp-(1->3)-alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->3)-D-ribitol-5-phosphate 0
                  alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->3)-D-ribitol 0
                  alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->4)-D-ribitol 0
                  alpha-L-Rhap-(1->3)-D-ribitol 0
                  alpha-L-Rhap-(1->4)-D-ribitol 0
                  alpha-L-Rhap-(1->4)-D-ribitol-(5-P-2)-alpha-D-Galp-(1->3)-alpha-D-Glcp 0
                  alpha-L-Rhap-(1->4)-D-ribitol-5-phosphate 0
                  beta-D-ribosyl-(1->1)-D-ribitol-5-phosphate + 0
                  reduced 6-(hydroxymethyl)-8-(1-D-ribityl)lumazine 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19751
    subatomic particle 19749
      composite particle 19749
        hadron 19749
          baryon 19749
            nucleon 19749
              atomic nucleus 19749
                atom 19749
                  main group element atom 19698
                    p-block element atom 19698
                      carbon group element atom 19644
                        carbon atom 19640
                          organic molecular entity 19640
                            heteroorganic entity 19399
                              organochalcogen compound 19189
                                organooxygen compound 19098
                                  carbohydrates and carbohydrate derivatives 14437
                                    carbohydrate 14437
                                      alditol 1910
                                        pentitol 54
                                          ribitol 1
                                            1-deoxy-1-[(5-nitro-2,6-dioxo-1,2,3,6-tetrahydropyrimidin-4-yl)amino]-D-ribitol 0
                                            1-deoxy-1-[(5-nitroso-2,6-dioxo-1,2,3,6-tetrahydropyrimidin-4-yl)amino]-D-ribito 0
                                            1-deoxy-1-\{[2,6-dihydroxy-5-(5-phosphonopentyl)pyrimidin-4-yl]amino\}-D-ribitol 0
                                            1-deoxy-1-\{[2,6-dioxo-5-(5-phosphonopentyl)-1,2,3,6-tetrahydropyrimidin-4-yl]amino\}-D-ribitol 0
                                            2-amino-6,7-dimethyl-4-oxo-8-(1'-D-ribityl)-4,8-dihydropteridine 0
                                            5-amino-5-(4-hydroxybenzyl)-6-(D-ribitylimino)-5,6-dihydrouracil 0
                                            5-amino-6-(D-ribitylamino)uracil 0
                                            6,7-dimethyl-8-(1-D-ribityl)lumazine 0
                                            6-(hydroxymethyl)-8-(1-D-ribityl)lumazine 0
                                            6-methyl-7-oxo-8-(1-D-ribityl)lumazine (2-hydroxy tautomer) 0
                                            6-methyl-7-oxo-8-(1-D-ribityl)lumazine (2-oxo tautomer) 0
                                            6-methyl-7-oxo-8-(1-D-ribityl)lumazine (2-oxo tautomer)(1-) 0
                                            7-hydroxy-6-methyl-8-(1-D-ribityl)lumazine 0
                                            8-(1,2-dideoxy-1-D-ribityl)-7-methyllumazine 0
                                            8-(1,4-dideoxy-1-D-ribityl)-6-methyllumazine 0
                                            8-(1,4-dideoxy-1-D-ribityl)-7-methyllumazine 0
                                            8-(1,5-dideoxy-1-D-ribityl)-7-methyllumazine 0
                                            8-(5-hydroxypentyl)-7-methyllumazine 0
                                            D-ribitol 1-phosphate 0
                                            D-ribitol 5-phosphate + 0
                                            D-ribitol-(5-P-2)-alpha-D-Galp-(1->3)-alpha-D-Glcp 0
                                            [3)-beta-D-ribosyl-(1->1)-D-ribitol-5-P-(O->]3 0
                                            alpha-D-Galp-(1->3)-alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->3)-D-ribitol 0
                                            alpha-D-Galp-(1->3)-alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->3)-D-ribitol-5-phosphate 0
                                            alpha-D-Galp-(1->3)-alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->4)-D-ribitol 0
                                            alpha-D-Galp-(1->3)-alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->4)-D-ribitol-5-phosphate 0
                                            alpha-D-Glcp-(1->3)-alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->3)-D-ribitol 0
                                            alpha-D-Glcp-(1->3)-alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->3)-D-ribitol-5-phosphate 0
                                            alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->3)-D-ribitol 0
                                            alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->4)-D-ribitol 0
                                            alpha-L-Rhap-(1->3)-D-ribitol 0
                                            alpha-L-Rhap-(1->4)-D-ribitol 0
                                            alpha-L-Rhap-(1->4)-D-ribitol-(5-P-2)-alpha-D-Galp-(1->3)-alpha-D-Glcp 0
                                            alpha-L-Rhap-(1->4)-D-ribitol-5-phosphate 0
                                            beta-D-ribosyl-(1->1)-D-ribitol-5-phosphate + 0
                                            reduced 6-(hydroxymethyl)-8-(1-D-ribityl)lumazine 0
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