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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.

Term:ribitol
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Accession:CHEBI:15963 term browser browse the term
Definition:A pentitol (five-carbon sugar alcohol) having meso-configuration, being derived from ribose by reduction of the carbonyl group. It occurs naturally in the plant Adonis vernalis.
Synonyms:exact_synonym: meso-ribitol
 related_synonym: (2R,3s,4S)-pentane-1,2,3,4,5-pentol;   Adonitol;   D-Adonitol;   D-Ribitol;   Formula=C5H12O5;   InChI=1S/C5H12O5/c6-1-3(8)5(10)4(9)2-7/h3-10H,1-2H2/t3-,4+,5-;   InChIKey=HEBKCHPVOIAQTA-ZXFHETKHSA-N;   L-ribitol;   SMILES=OC[C@H](O)[C@H](O)[C@H](O)CO
 alt_id: CHEBI:15043;   CHEBI:21074;   CHEBI:26552;   CHEBI:27854;   CHEBI:4230;   CHEBI:48505;   CHEBI:57591;   CHEBI:8841
 xref: Beilstein:1720524;   CAS:488-81-3;   Gmelin:82894;   HMDB:HMDB0000508;   KEGG:C00474;   KNApSAcK:C00001171
 xref_mesh: MESH:D012255
 xref: MetaCyc:RIBITOL;   PMID:15234337;   PMID:16664320;   PMID:16901854;   PMID:17336832;   PMID:17979222;   PMID:23564164;   PMID:24643482;   PMID:25108762;   Reaxys:1720524;   Wikipedia:Ribitol


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ribitol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Taldo1 transaldolase 1 increases abundance ISO TALDO1 gene mutant form results in increased abundance of Ribitol CTD PMID:19436114 NCBI chr 1:196,493,634...196,503,965
Ensembl chr 1:196,493,589...196,503,974
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Path 1
Term Annotations click to browse term
  CHEBI ontology 19812
    role 19761
      biological role 19761
        biochemical role 19381
          metabolite 19356
            eukaryotic metabolite 19044
              plant metabolite 17455
                ribitol 1
                  1-deoxy-1-[(5-nitro-2,6-dioxo-1,2,3,6-tetrahydropyrimidin-4-yl)amino]-D-ribitol 0
                  1-deoxy-1-[(5-nitroso-2,6-dioxo-1,2,3,6-tetrahydropyrimidin-4-yl)amino]-D-ribito 0
                  1-deoxy-1-\{[2,6-dihydroxy-5-(5-phosphonopentyl)pyrimidin-4-yl]amino\}-D-ribitol 0
                  1-deoxy-1-\{[2,6-dioxo-5-(5-phosphonopentyl)-1,2,3,6-tetrahydropyrimidin-4-yl]amino\}-D-ribitol 0
                  2-amino-6,7-dimethyl-4-oxo-8-(1'-D-ribityl)-4,8-dihydropteridine 0
                  5-amino-5-(4-hydroxybenzyl)-6-(D-ribitylimino)-5,6-dihydrouracil 0
                  5-amino-6-(D-ribitylamino)uracil 0
                  6,7-dimethyl-8-(1-D-ribityl)lumazine 0
                  6-(hydroxymethyl)-8-(1-D-ribityl)lumazine 0
                  6-methyl-7-oxo-8-(1-D-ribityl)lumazine (2-hydroxy tautomer) 0
                  6-methyl-7-oxo-8-(1-D-ribityl)lumazine (2-oxo tautomer) 0
                  6-methyl-7-oxo-8-(1-D-ribityl)lumazine (2-oxo tautomer)(1-) 0
                  7-hydroxy-6-methyl-8-(1-D-ribityl)lumazine 0
                  8-(1,2-dideoxy-1-D-ribityl)-7-methyllumazine 0
                  8-(1,4-dideoxy-1-D-ribityl)-6-methyllumazine 0
                  8-(1,4-dideoxy-1-D-ribityl)-7-methyllumazine 0
                  8-(1,5-dideoxy-1-D-ribityl)-7-methyllumazine 0
                  8-(5-hydroxypentyl)-7-methyllumazine 0
                  D-ribitol 1-phosphate 0
                  D-ribitol 5-phosphate + 0
                  D-ribitol-(5-P-2)-alpha-D-Galp-(1->3)-alpha-D-Glcp 0
                  [3)-beta-D-ribosyl-(1->1)-D-ribitol-5-P-(O->]3 0
                  alpha-D-Galp-(1->3)-alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->3)-D-ribitol 0
                  alpha-D-Galp-(1->3)-alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->3)-D-ribitol-5-phosphate 0
                  alpha-D-Galp-(1->3)-alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->4)-D-ribitol 0
                  alpha-D-Galp-(1->3)-alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->4)-D-ribitol-5-phosphate 0
                  alpha-D-Glcp-(1->3)-alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->3)-D-ribitol 0
                  alpha-D-Glcp-(1->3)-alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->3)-D-ribitol-5-phosphate 0
                  alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->3)-D-ribitol 0
                  alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->4)-D-ribitol 0
                  alpha-L-Rhap-(1->3)-D-ribitol 0
                  alpha-L-Rhap-(1->4)-D-ribitol 0
                  alpha-L-Rhap-(1->4)-D-ribitol-(5-P-2)-alpha-D-Galp-(1->3)-alpha-D-Glcp 0
                  alpha-L-Rhap-(1->4)-D-ribitol-5-phosphate 0
                  beta-D-ribosyl-(1->1)-D-ribitol-5-phosphate + 0
                  reduced 6-(hydroxymethyl)-8-(1-D-ribityl)lumazine 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19812
    subatomic particle 19811
      composite particle 19811
        hadron 19811
          baryon 19811
            nucleon 19811
              atomic nucleus 19811
                atom 19811
                  main group element atom 19708
                    p-block element atom 19708
                      carbon group element atom 19630
                        carbon atom 19620
                          organic molecular entity 19620
                            heteroorganic entity 19283
                              organochalcogen compound 19054
                                organooxygen compound 19004
                                  carbohydrates and carbohydrate derivatives 12341
                                    carbohydrate 12341
                                      alditol 1892
                                        pentitol 51
                                          ribitol 1
                                            1-deoxy-1-[(5-nitro-2,6-dioxo-1,2,3,6-tetrahydropyrimidin-4-yl)amino]-D-ribitol 0
                                            1-deoxy-1-[(5-nitroso-2,6-dioxo-1,2,3,6-tetrahydropyrimidin-4-yl)amino]-D-ribito 0
                                            1-deoxy-1-\{[2,6-dihydroxy-5-(5-phosphonopentyl)pyrimidin-4-yl]amino\}-D-ribitol 0
                                            1-deoxy-1-\{[2,6-dioxo-5-(5-phosphonopentyl)-1,2,3,6-tetrahydropyrimidin-4-yl]amino\}-D-ribitol 0
                                            2-amino-6,7-dimethyl-4-oxo-8-(1'-D-ribityl)-4,8-dihydropteridine 0
                                            5-amino-5-(4-hydroxybenzyl)-6-(D-ribitylimino)-5,6-dihydrouracil 0
                                            5-amino-6-(D-ribitylamino)uracil 0
                                            6,7-dimethyl-8-(1-D-ribityl)lumazine 0
                                            6-(hydroxymethyl)-8-(1-D-ribityl)lumazine 0
                                            6-methyl-7-oxo-8-(1-D-ribityl)lumazine (2-hydroxy tautomer) 0
                                            6-methyl-7-oxo-8-(1-D-ribityl)lumazine (2-oxo tautomer) 0
                                            6-methyl-7-oxo-8-(1-D-ribityl)lumazine (2-oxo tautomer)(1-) 0
                                            7-hydroxy-6-methyl-8-(1-D-ribityl)lumazine 0
                                            8-(1,2-dideoxy-1-D-ribityl)-7-methyllumazine 0
                                            8-(1,4-dideoxy-1-D-ribityl)-6-methyllumazine 0
                                            8-(1,4-dideoxy-1-D-ribityl)-7-methyllumazine 0
                                            8-(1,5-dideoxy-1-D-ribityl)-7-methyllumazine 0
                                            8-(5-hydroxypentyl)-7-methyllumazine 0
                                            D-ribitol 1-phosphate 0
                                            D-ribitol 5-phosphate + 0
                                            D-ribitol-(5-P-2)-alpha-D-Galp-(1->3)-alpha-D-Glcp 0
                                            [3)-beta-D-ribosyl-(1->1)-D-ribitol-5-P-(O->]3 0
                                            alpha-D-Galp-(1->3)-alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->3)-D-ribitol 0
                                            alpha-D-Galp-(1->3)-alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->3)-D-ribitol-5-phosphate 0
                                            alpha-D-Galp-(1->3)-alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->4)-D-ribitol 0
                                            alpha-D-Galp-(1->3)-alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->4)-D-ribitol-5-phosphate 0
                                            alpha-D-Glcp-(1->3)-alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->3)-D-ribitol 0
                                            alpha-D-Glcp-(1->3)-alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->3)-D-ribitol-5-phosphate 0
                                            alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->3)-D-ribitol 0
                                            alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->4)-D-ribitol 0
                                            alpha-L-Rhap-(1->3)-D-ribitol 0
                                            alpha-L-Rhap-(1->4)-D-ribitol 0
                                            alpha-L-Rhap-(1->4)-D-ribitol-(5-P-2)-alpha-D-Galp-(1->3)-alpha-D-Glcp 0
                                            alpha-L-Rhap-(1->4)-D-ribitol-5-phosphate 0
                                            beta-D-ribosyl-(1->1)-D-ribitol-5-phosphate + 0
                                            reduced 6-(hydroxymethyl)-8-(1-D-ribityl)lumazine 0
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