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ONTOLOGY REPORT - ANNOTATIONS


Term:ribitol
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Accession:CHEBI:15963 term browser browse the term
Definition:A pentitol (five-carbon sugar alcohol) having meso-configuration, being derived from ribose by reduction of the carbonyl group. It occurs naturally in the plant Adonis vernalis.
Synonyms:exact_synonym: meso-ribitol
 related_synonym: (2R,3s,4S)-pentane-1,2,3,4,5-pentol;   Adonitol;   D-Adonitol;   D-ribitol;   Formula=C5H12O5;   InChI=1S/C5H12O5/c6-1-3(8)5(10)4(9)2-7/h3-10H,1-2H2/t3-,4+,5-;   InChIKey=HEBKCHPVOIAQTA-ZXFHETKHSA-N;   L-ribitol;   SMILES=OC[C@H](O)[C@H](O)[C@H](O)CO
 alt_id: CHEBI:15043;   CHEBI:21074;   CHEBI:26552;   CHEBI:27854;   CHEBI:4230;   CHEBI:48505;   CHEBI:57591;   CHEBI:8841
 xref: Beilstein:1720524 "ChemIDplus";   CAS:488-81-3 "ChemIDplus";   CAS:488-81-3 "KEGG COMPOUND";   CAS:488-81-3 "NIST Chemistry WebBook";   Gmelin:82894 "Gmelin";   HMDB:HMDB0000508;   KEGG:C00474;   KNApSAcK:C00001171
 xref_mesh: MESH:D012255
 xref: MetaCyc:RIBITOL;   PMID:15234337 "Europe PMC";   PMID:16664320 "Europe PMC";   PMID:16901854 "Europe PMC";   PMID:17336832 "Europe PMC";   PMID:17979222 "Europe PMC";   PMID:23564164 "Europe PMC";   PMID:24643482 "Europe PMC";   PMID:25108762 "Europe PMC";   Reaxys:1720524 "Reaxys";   Wikipedia:Ribitol


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ribitol term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Taldo1 transaldolase 1 JBrowse link 1 214,375,555 214,385,886 RGD:6480464

Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 19669
    role 19613
      biological role 19611
        biochemical role 19138
          metabolite 19106
            eukaryotic metabolite 18748
              plant metabolite 17044
                ribitol 1
                  1-deoxy-1-[(5-nitro-2,6-dioxo-1,2,3,6-tetrahydropyrimidin-4-yl)amino]-D-ribitol 0
                  1-deoxy-1-[(5-nitroso-2,6-dioxo-1,2,3,6-tetrahydropyrimidin-4-yl)amino]-D-ribito 0
                  1-deoxy-1-\{[2,6-dihydroxy-5-(5-phosphonopentyl)pyrimidin-4-yl]amino\}-D-ribitol 0
                  1-deoxy-1-\{[2,6-dioxo-5-(5-phosphonopentyl)-1,2,3,6-tetrahydropyrimidin-4-yl]amino\}-D-ribitol 0
                  2-amino-6,7-dimethyl-4-oxo-8-(1'-D-ribityl)-4,8-dihydropteridine 0
                  5-amino-5-(4-hydroxybenzyl)-6-(D-ribitylimino)-5,6-dihydrouracil 0
                  5-amino-6-(D-ribitylamino)uracil 0
                  6,7-dimethyl-8-(1-D-ribityl)lumazine 0
                  6-(hydroxymethyl)-8-(1-D-ribityl)lumazine 0
                  6-methyl-7-oxo-8-(1-D-ribityl)lumazine (2-hydroxy tautomer) 0
                  6-methyl-7-oxo-8-(1-D-ribityl)lumazine (2-oxo tautomer) 0
                  6-methyl-7-oxo-8-(1-D-ribityl)lumazine (2-oxo tautomer)(1-) 0
                  7-hydroxy-6-methyl-8-(1-D-ribityl)lumazine 0
                  D-ribitol 1-phosphate 0
                  D-ribitol 5-phosphate + 0
                  D-ribitol-(5-P-2)-alpha-D-Galp-(1->3)-alpha-D-Glcp 0
                  [3)-beta-D-ribosyl-(1->1)-D-ribitol-5-P-(O->]3 0
                  alpha-D-Galp-(1->3)-alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->3)-D-ribitol 0
                  alpha-D-Galp-(1->3)-alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->3)-D-ribitol-5-phosphate 0
                  alpha-D-Galp-(1->3)-alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->4)-D-ribitol 0
                  alpha-D-Galp-(1->3)-alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->4)-D-ribitol-5-phosphate 0
                  alpha-D-Glcp-(1->3)-alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->3)-D-ribitol 0
                  alpha-D-Glcp-(1->3)-alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->3)-D-ribitol-5-phosphate 0
                  alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->3)-D-ribitol 0
                  alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->4)-D-ribitol 0
                  alpha-L-Rhap-(1->3)-D-ribitol 0
                  alpha-L-Rhap-(1->4)-D-ribitol 0
                  alpha-L-Rhap-(1->4)-D-ribitol-(5-P-2)-alpha-D-Galp-(1->3)-alpha-D-Glcp 0
                  alpha-L-Rhap-(1->4)-D-ribitol-5-phosphate 0
                  beta-D-ribosyl-(1->1)-D-ribitol-5-phosphate + 0
                  reduced 6-(hydroxymethyl)-8-(1-D-ribityl)lumazine 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 19669
    subatomic particle 19665
      composite particle 19665
        hadron 19665
          baryon 19665
            nucleon 19665
              atomic nucleus 19665
                atom 19665
                  main group element atom 19545
                    p-block element atom 19545
                      carbon group element atom 19428
                        carbon atom 19420
                          organic molecular entity 19420
                            heteroorganic entity 19003
                              organochalcogen compound 18718
                                organooxygen compound 18629
                                  carbohydrates and carbohydrate derivatives 11703
                                    carbohydrate 11703
                                      alditol 1814
                                        pentitol 3
                                          ribitol 1
                                            1-deoxy-1-[(5-nitro-2,6-dioxo-1,2,3,6-tetrahydropyrimidin-4-yl)amino]-D-ribitol 0
                                            1-deoxy-1-[(5-nitroso-2,6-dioxo-1,2,3,6-tetrahydropyrimidin-4-yl)amino]-D-ribito 0
                                            1-deoxy-1-\{[2,6-dihydroxy-5-(5-phosphonopentyl)pyrimidin-4-yl]amino\}-D-ribitol 0
                                            1-deoxy-1-\{[2,6-dioxo-5-(5-phosphonopentyl)-1,2,3,6-tetrahydropyrimidin-4-yl]amino\}-D-ribitol 0
                                            2-amino-6,7-dimethyl-4-oxo-8-(1'-D-ribityl)-4,8-dihydropteridine 0
                                            5-amino-5-(4-hydroxybenzyl)-6-(D-ribitylimino)-5,6-dihydrouracil 0
                                            5-amino-6-(D-ribitylamino)uracil 0
                                            6,7-dimethyl-8-(1-D-ribityl)lumazine 0
                                            6-(hydroxymethyl)-8-(1-D-ribityl)lumazine 0
                                            6-methyl-7-oxo-8-(1-D-ribityl)lumazine (2-hydroxy tautomer) 0
                                            6-methyl-7-oxo-8-(1-D-ribityl)lumazine (2-oxo tautomer) 0
                                            6-methyl-7-oxo-8-(1-D-ribityl)lumazine (2-oxo tautomer)(1-) 0
                                            7-hydroxy-6-methyl-8-(1-D-ribityl)lumazine 0
                                            D-ribitol 1-phosphate 0
                                            D-ribitol 5-phosphate + 0
                                            D-ribitol-(5-P-2)-alpha-D-Galp-(1->3)-alpha-D-Glcp 0
                                            [3)-beta-D-ribosyl-(1->1)-D-ribitol-5-P-(O->]3 0
                                            alpha-D-Galp-(1->3)-alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->3)-D-ribitol 0
                                            alpha-D-Galp-(1->3)-alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->3)-D-ribitol-5-phosphate 0
                                            alpha-D-Galp-(1->3)-alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->4)-D-ribitol 0
                                            alpha-D-Galp-(1->3)-alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->4)-D-ribitol-5-phosphate 0
                                            alpha-D-Glcp-(1->3)-alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->3)-D-ribitol 0
                                            alpha-D-Glcp-(1->3)-alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->3)-D-ribitol-5-phosphate 0
                                            alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->3)-D-ribitol 0
                                            alpha-D-Glcp-(1->3)-alpha-L-Rhap-(1->4)-D-ribitol 0
                                            alpha-L-Rhap-(1->3)-D-ribitol 0
                                            alpha-L-Rhap-(1->4)-D-ribitol 0
                                            alpha-L-Rhap-(1->4)-D-ribitol-(5-P-2)-alpha-D-Galp-(1->3)-alpha-D-Glcp 0
                                            alpha-L-Rhap-(1->4)-D-ribitol-5-phosphate 0
                                            beta-D-ribosyl-(1->1)-D-ribitol-5-phosphate + 0
                                            reduced 6-(hydroxymethyl)-8-(1-D-ribityl)lumazine 0
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.